Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trdmt1O55055 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trdmt1O55055 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.54■□□□□ 0.4
Trdmt1O55055 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.54■□□□□ 0.4
Trdmt1O55055 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trdmt1O55055 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.54■□□□□ 0.4
Trdmt1O55055 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.54■□□□□ 0.4
Trdmt1O55055 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trdmt1O55055 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trdmt1O55055 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trdmt1O55055 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trdmt1O55055 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.54■□□□□ 0.4
Trdmt1O55055 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Trdmt1O55055 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trdmt1O55055 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.53■□□□□ 0.4
Trdmt1O55055 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.53■□□□□ 0.4
Trdmt1O55055 Gm17968-201ENSMUST00000194902 784 ntBASIC17.53■□□□□ 0.4
Trdmt1O55055 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.53■□□□□ 0.4
Trdmt1O55055 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.53■□□□□ 0.4
Trdmt1O55055 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trdmt1O55055 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trdmt1O55055 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trdmt1O55055 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trdmt1O55055 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trdmt1O55055 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trdmt1O55055 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trdmt1O55055 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trdmt1O55055 Gm13597-201ENSMUST00000121239 375 ntBASIC17.52■□□□□ 0.4
Trdmt1O55055 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.52■□□□□ 0.4
Trdmt1O55055 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.52■□□□□ 0.4
Trdmt1O55055 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.52■□□□□ 0.4
Trdmt1O55055 Gm44492-201ENSMUST00000197012 141 ntBASIC17.52■□□□□ 0.4
Trdmt1O55055 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trdmt1O55055 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trdmt1O55055 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trdmt1O55055 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trdmt1O55055 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.51■□□□□ 0.39
Trdmt1O55055 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trdmt1O55055 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.51■□□□□ 0.39
Trdmt1O55055 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Trdmt1O55055 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.51■□□□□ 0.39
Trdmt1O55055 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trdmt1O55055 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trdmt1O55055 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.51■□□□□ 0.39
Trdmt1O55055 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trdmt1O55055 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.51■□□□□ 0.39
Trdmt1O55055 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.51■□□□□ 0.39
Trdmt1O55055 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.5■□□□□ 0.39
Trdmt1O55055 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trdmt1O55055 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.5■□□□□ 0.39
Trdmt1O55055 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trdmt1O55055 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trdmt1O55055 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trdmt1O55055 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.5■□□□□ 0.39
Trdmt1O55055 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trdmt1O55055 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trdmt1O55055 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trdmt1O55055 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.5■□□□□ 0.39
Trdmt1O55055 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trdmt1O55055 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trdmt1O55055 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Trdmt1O55055 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.5■□□□□ 0.39
Trdmt1O55055 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.5■□□□□ 0.39
Trdmt1O55055 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.49■□□□□ 0.39
Trdmt1O55055 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.49■□□□□ 0.39
Trdmt1O55055 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trdmt1O55055 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms