Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SncaO55042 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.24□□□□□ -0.29
SncaO55042 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.24□□□□□ -0.29
SncaO55042 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.24□□□□□ -0.29
SncaO55042 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Gm16061-201ENSMUST00000122167 857 ntBASIC13.24□□□□□ -0.29
SncaO55042 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.24□□□□□ -0.29
SncaO55042 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SncaO55042 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.24□□□□□ -0.29
SncaO55042 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.24□□□□□ -0.29
SncaO55042 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SncaO55042 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.24□□□□□ -0.29
SncaO55042 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SncaO55042 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.23□□□□□ -0.29
SncaO55042 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.23□□□□□ -0.29
SncaO55042 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
SncaO55042 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
SncaO55042 Gm44450-201ENSMUST00000199528 114 ntBASIC13.23□□□□□ -0.29
SncaO55042 Gm18421-201ENSMUST00000204122 625 ntBASIC13.23□□□□□ -0.29
SncaO55042 Gm30025-201ENSMUST00000218555 728 ntBASIC13.23□□□□□ -0.29
SncaO55042 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SncaO55042 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SncaO55042 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SncaO55042 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SncaO55042 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SncaO55042 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.22□□□□□ -0.29
SncaO55042 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.22□□□□□ -0.29
SncaO55042 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.22□□□□□ -0.29
SncaO55042 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.22□□□□□ -0.29
SncaO55042 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.22□□□□□ -0.29
SncaO55042 Gm7370-201ENSMUST00000219471 767 ntBASIC13.22□□□□□ -0.29
SncaO55042 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SncaO55042 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SncaO55042 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SncaO55042 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SncaO55042 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms