Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ChkaO54804 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ChkaO54804 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
ChkaO54804 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ChkaO54804 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
ChkaO54804 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ChkaO54804 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ChkaO54804 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
ChkaO54804 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.15■□□□□ 0.18
ChkaO54804 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ChkaO54804 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ChkaO54804 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
ChkaO54804 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
ChkaO54804 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.15■□□□□ 0.18
ChkaO54804 Mir7071-201ENSMUST00000184847 69 ntBASIC16.15■□□□□ 0.18
ChkaO54804 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.15■□□□□ 0.18
ChkaO54804 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ChkaO54804 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.15■□□□□ 0.18
ChkaO54804 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ChkaO54804 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Mir770-201ENSMUST00000103252 94 ntBASIC16.14■□□□□ 0.17
ChkaO54804 Gm10052-201ENSMUST00000168019 960 ntBASIC16.14■□□□□ 0.17
ChkaO54804 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.14■□□□□ 0.17
ChkaO54804 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Gm7729-201ENSMUST00000050143 801 ntBASIC16.14■□□□□ 0.17
ChkaO54804 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ChkaO54804 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ChkaO54804 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.14■□□□□ 0.17
ChkaO54804 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
ChkaO54804 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ChkaO54804 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.14■□□□□ 0.17
ChkaO54804 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ChkaO54804 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.13■□□□□ 0.17
ChkaO54804 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ChkaO54804 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ChkaO54804 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Gm44430-201ENSMUST00000203376 995 ntBASIC16.13■□□□□ 0.17
ChkaO54804 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
ChkaO54804 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ChkaO54804 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms