Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.93□□□□□ -0.02
Abca4O35600 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.93□□□□□ -0.02
Abca4O35600 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Abca4O35600 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Abca4O35600 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.92□□□□□ -0.02
Abca4O35600 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Gm12008-201ENSMUST00000117791 755 ntBASIC14.92□□□□□ -0.02
Abca4O35600 Gm6415-201ENSMUST00000118488 348 ntBASIC14.92□□□□□ -0.02
Abca4O35600 Gm15824-201ENSMUST00000119516 955 ntBASIC14.92□□□□□ -0.02
Abca4O35600 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.92□□□□□ -0.02
Abca4O35600 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
Abca4O35600 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.92□□□□□ -0.02
Abca4O35600 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.92□□□□□ -0.02
Abca4O35600 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Abca4O35600 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.92□□□□□ -0.02
Abca4O35600 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Abca4O35600 Gm23984-201ENSMUST00000157139 203 ntBASIC14.92□□□□□ -0.02
Abca4O35600 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Abca4O35600 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Abca4O35600 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Abca4O35600 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.91□□□□□ -0.02
Abca4O35600 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Abca4O35600 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Abca4O35600 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Abca4O35600 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.91□□□□□ -0.02
Abca4O35600 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Abca4O35600 Gm6973-201ENSMUST00000117080 721 ntBASIC14.91□□□□□ -0.02
Abca4O35600 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.91□□□□□ -0.02
Abca4O35600 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Abca4O35600 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.9□□□□□ -0.02
Abca4O35600 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Gm6888-201ENSMUST00000221983 706 ntBASIC14.9□□□□□ -0.02
Abca4O35600 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.9□□□□□ -0.02
Abca4O35600 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Abca4O35600 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Abca4O35600 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.89□□□□□ -0.03
Abca4O35600 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.89□□□□□ -0.03
Abca4O35600 Gm6745-201ENSMUST00000199216 526 ntBASIC14.89□□□□□ -0.03
Abca4O35600 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.89□□□□□ -0.03
Abca4O35600 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.89□□□□□ -0.03
Abca4O35600 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.89□□□□□ -0.03
Abca4O35600 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Abca4O35600 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.89□□□□□ -0.03
Abca4O35600 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.89□□□□□ -0.03
Abca4O35600 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.89□□□□□ -0.03
Abca4O35600 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Abca4O35600 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms