Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Mir5126-201ENSMUST00000175513 77 ntBASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gm17535J3KMR8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Gm6550-201ENSMUST00000187574 993 ntBASIC16.94■□□□□ 0.3
Gm17535J3KMR8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.94■□□□□ 0.3
Gm17535J3KMR8 AW822252-206ENSMUST00000208904 237 ntBASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gm17535J3KMR8 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Gm17535J3KMR8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Gm8344-201ENSMUST00000119813 856 ntBASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.92■□□□□ 0.3
Gm17535J3KMR8 AV026068-213ENSMUST00000223675 1171 ntBASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.92■□□□□ 0.3
Gm17535J3KMR8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Gm17535J3KMR8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms