Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh17E9PXF0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Gm18206-201ENSMUST00000207027 926 ntBASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Gm10060-201ENSMUST00000212002 111 ntBASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh17E9PXF0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Pcdh17E9PXF0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh17E9PXF0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh17E9PXF0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdh17E9PXF0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdh17E9PXF0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdh17E9PXF0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Gm27525-201ENSMUST00000184465 107 ntBASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdh17E9PXF0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdh17E9PXF0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms