Protein–RNA interactions for Protein: C0HKE1

Hist1h2ab, Histone H2A type 1-B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2abC0HKE1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Hist1h2abC0HKE1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hist1h2abC0HKE1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hist1h2abC0HKE1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Gm37722-201ENSMUST00000193757 208 ntBASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hist1h2abC0HKE1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms