Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm11127A7VMS2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm11127A7VMS2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Il3ra-202ENSMUST00000223589 738 ntBASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm11127A7VMS2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm11127A7VMS2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms