Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Mindy4b-psA0A1W2P7H6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Gm5864-201ENSMUST00000202263 970 ntBASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Rps4l-201ENSMUST00000071745 943 ntBASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.81■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Mindy4b-psA0A1W2P7H6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms