Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC7.92□□□□□ -1.14
Gm3880A0A1B0GSB3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Gm3880A0A1B0GSB3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Gm3880A0A1B0GSB3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Gm3880A0A1B0GSB3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm37844-201ENSMUST00000192473 4097 ntBASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm43592-201ENSMUST00000196922 1165 ntBASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm10399-202ENSMUST00000202768 748 ntBASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Gm3880A0A1B0GSB3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm7860-201ENSMUST00000121190 879 ntBASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Gm6311-201ENSMUST00000073790 878 ntBASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Gm3880A0A1B0GSB3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Gm3880A0A1B0GSB3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms