Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm12382-201ENSMUST00000122005 922 ntBASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm37025-201ENSMUST00000195159 829 ntBASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Sybu-209ENSMUST00000228639 4113 ntBASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3n-3A0A0G2JEM0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms