Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm13186-201ENSMUST00000118031 316 ntBASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm27741-201ENSMUST00000185060 237 ntBASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Phf7-203ENSMUST00000226565 1971 ntBASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm27742-201ENSMUST00000184667 60 ntBASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Mir3081-201ENSMUST00000175305 84 ntBASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Gm18669-201ENSMUST00000216049 778 ntBASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Otx2os1-206ENSMUST00000228153 787 ntBASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trbv13-1A0A0B4J1P8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms