Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Il3ra-202ENSMUST00000223589 738 ntBASIC12.39□□□□□ -0.43
Trav16A0A075B653 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav16A0A075B653 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.38□□□□□ -0.43
Trav16A0A075B653 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Gm7638-201ENSMUST00000121348 967 ntBASIC12.38□□□□□ -0.43
Trav16A0A075B653 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav16A0A075B653 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav16A0A075B653 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.37□□□□□ -0.43
Trav16A0A075B653 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.37□□□□□ -0.43
Trav16A0A075B653 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.37□□□□□ -0.43
Trav16A0A075B653 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Gm37179-201ENSMUST00000194862 823 ntBASIC12.37□□□□□ -0.43
Trav16A0A075B653 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Gm10602-201ENSMUST00000098239 609 ntBASIC12.37□□□□□ -0.43
Trav16A0A075B653 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav16A0A075B653 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav16A0A075B653 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms