Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.29□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.459-201ENST00000384251 102 ntBASIC-1.29□□□□□ -2.62
USH1CQ9Y6N9 RNU6-813P-201ENST00000384691 107 ntBASIC-1.29□□□□□ -2.62
USH1CQ9Y6N9 RNU6-246P-201ENST00000384702 107 ntBASIC-1.29□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.29□□□□□ -2.62
USH1CQ9Y6N9 RNA5SP147-201ENST00000516493 109 ntBASIC-1.29□□□□□ -2.62
USH1CQ9Y6N9 AC103810.7-201ENST00000607821 91 ntBASIC-1.29□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 RNU6-824P-201ENST00000363724 104 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 MIR519A2-201ENST00000384990 87 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 MIR1302-3-201ENST00000408128 138 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 RNU6-394P-201ENST00000410735 107 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 RPL35AP4-201ENST00000412007 102 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 AL353691.2-201ENST00000443795 59 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 RNU6-732P-201ENST00000516033 103 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 MIR548X2-201ENST00000579776 100 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.3□□□□□ -2.62
USH1CQ9Y6N9 SNORD45B-201ENST00000364617 72 ntBASIC-1.31□□□□□ -2.62
USH1CQ9Y6N9 AL078595.1-201ENST00000404458 226 ntBASIC-1.31□□□□□ -2.62
USH1CQ9Y6N9 RNU6-168P-201ENST00000516189 101 ntBASIC-1.31□□□□□ -2.62
USH1CQ9Y6N9 SNORA18.5-201ENST00000516616 101 ntBASIC-1.31□□□□□ -2.62
USH1CQ9Y6N9 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.31□□□□□ -2.62
USH1CQ9Y6N9 MIR3657-201ENST00000584818 117 ntBASIC-1.31□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.32□□□□□ -2.62
USH1CQ9Y6N9 MIR203A-201ENST00000384836 110 ntBASIC-1.32□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.32□□□□□ -2.62
USH1CQ9Y6N9 RNA5SP180-201ENST00000516181 101 ntBASIC-1.32□□□□□ -2.62
USH1CQ9Y6N9 MIR548Z-201ENST00000584743 97 ntBASIC-1.32□□□□□ -2.62
USH1CQ9Y6N9 MIR1246-201ENST00000636535 73 ntBASIC-1.32□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 MIR569-201ENST00000385228 96 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 MIR548I1-201ENST00000408810 149 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 RNU6-519P-201ENST00000410590 108 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 MTATP6P29-201ENST00000415057 132 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 AL117351.2-201ENST00000513571 157 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 RNU7-154P-201ENST00000516194 62 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 MIR4777-201ENST00000583710 86 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.33□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.34□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.34□□□□□ -2.62
USH1CQ9Y6N9 SNORD116-18-201ENST00000383961 92 ntBASIC-1.34□□□□□ -2.62
USH1CQ9Y6N9 MIR548H1-201ENST00000408610 102 ntBASIC-1.34□□□□□ -2.62
USH1CQ9Y6N9 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.34□□□□□ -2.62
USH1CQ9Y6N9 U7.5-201ENST00000517224 61 ntBASIC-1.34□□□□□ -2.62
USH1CQ9Y6N9 MIR6509-201ENST00000614603 85 ntBASIC-1.34□□□□□ -2.62
USH1CQ9Y6N9 MIR5683-201ENST00000636514 76 ntBASIC-1.34□□□□□ -2.62
USH1CQ9Y6N9 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.35□□□□□ -2.63
USH1CQ9Y6N9 MIR521-2-201ENST00000384818 87 ntBASIC-1.35□□□□□ -2.63
USH1CQ9Y6N9 SNORA19.1-201ENST00000410656 129 ntBASIC-1.35□□□□□ -2.63
USH1CQ9Y6N9 RNU7-88P-201ENST00000458752 63 ntBASIC-1.35□□□□□ -2.63
USH1CQ9Y6N9 MIR4773-1-201ENST00000637203 78 ntBASIC-1.35□□□□□ -2.63
USH1CQ9Y6N9 RNU6-79P-201ENST00000362511 107 ntBASIC-1.36□□□□□ -2.63
USH1CQ9Y6N9 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.36□□□□□ -2.63
USH1CQ9Y6N9 MIR5009-201ENST00000578736 100 ntBASIC-1.36□□□□□ -2.63
USH1CQ9Y6N9 U6.81-201ENST00000612550 106 ntBASIC-1.36□□□□□ -2.63
USH1CQ9Y6N9 RNU6-228P-201ENST00000362700 106 ntBASIC-1.37□□□□□ -2.63
USH1CQ9Y6N9 SNORD18.1-201ENST00000363807 70 ntBASIC-1.37□□□□□ -2.63
USH1CQ9Y6N9 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.37□□□□□ -2.63
USH1CQ9Y6N9 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.37□□□□□ -2.63
USH1CQ9Y6N9 MTND3P2-201ENST00000438452 342 ntBASIC-1.37□□□□□ -2.63
USH1CQ9Y6N9 AL118496.2-201ENST00000448300 230 ntBASIC-1.37□□□□□ -2.63
USH1CQ9Y6N9 MIR4723-201ENST00000585070 81 ntBASIC-1.37□□□□□ -2.63
USH1CQ9Y6N9 RNU5F-1-201ENST00000362507 117 ntBASIC-1.38□□□□□ -2.63
USH1CQ9Y6N9 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.38□□□□□ -2.63
USH1CQ9Y6N9 RNU6-772P-201ENST00000516042 105 ntBASIC-1.38□□□□□ -2.63
USH1CQ9Y6N9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.38□□□□□ -2.63
USH1CQ9Y6N9 MIR6739-201ENST00000622461 75 ntBASIC-1.38□□□□□ -2.63
USH1CQ9Y6N9 RNU6-983P-201ENST00000516004 103 ntBASIC-1.39□□□□□ -2.63
USH1CQ9Y6N9 RNU6-518P-201ENST00000516056 96 ntBASIC-1.39□□□□□ -2.63
USH1CQ9Y6N9 RNA5SP272-201ENST00000516095 111 ntBASIC-1.39□□□□□ -2.63
USH1CQ9Y6N9 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.39□□□□□ -2.63
USH1CQ9Y6N9 AP001094.1-201ENST00000579805 193 ntBASIC-1.39□□□□□ -2.63
USH1CQ9Y6N9 MIR4503-201ENST00000582187 83 ntBASIC-1.39□□□□□ -2.63
USH1CQ9Y6N9 RNU6-200P-201ENST00000364743 107 ntBASIC-1.4□□□□□ -2.63
USH1CQ9Y6N9 AL691482.2-201ENST00000457453 84 ntBASIC-1.4□□□□□ -2.63
USH1CQ9Y6N9 AC108019.1-201ENST00000512540 175 ntBASIC-1.4□□□□□ -2.63
USH1CQ9Y6N9 MIR3144-201ENST00000579460 79 ntBASIC-1.4□□□□□ -2.63
USH1CQ9Y6N9 AC012531.4-201ENST00000616509 177 ntBASIC-1.4□□□□□ -2.63
USH1CQ9Y6N9 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.41□□□□□ -2.64
USH1CQ9Y6N9 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.41□□□□□ -2.64
USH1CQ9Y6N9 SNORA63-201ENST00000363450 132 ntBASIC-1.41□□□□□ -2.64
USH1CQ9Y6N9 RNU6-608P-201ENST00000383927 104 ntBASIC-1.41□□□□□ -2.64
USH1CQ9Y6N9 RNU6-804P-201ENST00000384286 107 ntBASIC-1.41□□□□□ -2.64
USH1CQ9Y6N9 MIR520D-201ENST00000385002 87 ntBASIC-1.41□□□□□ -2.64
USH1CQ9Y6N9 RNU6-400P-201ENST00000391173 106 ntBASIC-1.41□□□□□ -2.64
USH1CQ9Y6N9 MIR4756-201ENST00000577874 78 ntBASIC-1.41□□□□□ -2.64
USH1CQ9Y6N9 MIR4490-201ENST00000582647 84 ntBASIC-1.41□□□□□ -2.64
USH1CQ9Y6N9 AL157777.2-201ENST00000258070 137 ntBASIC-1.42□□□□□ -2.64
USH1CQ9Y6N9 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.42□□□□□ -2.64
USH1CQ9Y6N9 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.42□□□□□ -2.64
USH1CQ9Y6N9 RNU6-478P-201ENST00000363904 110 ntBASIC-1.42□□□□□ -2.64
USH1CQ9Y6N9 SNORD115-27-201ENST00000364430 82 ntBASIC-1.42□□□□□ -2.64
USH1CQ9Y6N9 SNORD58A-201ENST00000383875 65 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms