Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC110620.1-201ENST00000416042 228 ntBASIC0.9□□□□□ -2.27
PCDHGA11Q9Y5H2 RNU4-54P-201ENST00000516428 129 ntBASIC0.9□□□□□ -2.27
PCDHGA11Q9Y5H2 U6.96-201ENST00000636425 70 ntBASIC0.9□□□□□ -2.27
PCDHGA11Q9Y5H2 Y_RNA.226-201ENST00000364337 114 ntBASIC0.89□□□□□ -2.27
PCDHGA11Q9Y5H2 SNORA33.1-201ENST00000364957 130 ntBASIC0.89□□□□□ -2.27
PCDHGA11Q9Y5H2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.88□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR499A-201ENST00000384903 122 ntBASIC0.88□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR4653-201ENST00000585107 83 ntBASIC0.88□□□□□ -2.27
PCDHGA11Q9Y5H2 Y_RNA.224-201ENST00000364308 111 ntBASIC0.87□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
PCDHGA11Q9Y5H2 AC243829.6-201ENST00000612652 106 ntBASIC0.87□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR8070-201ENST00000616510 88 ntBASIC0.87□□□□□ -2.27
PCDHGA11Q9Y5H2 RNU6-669P-201ENST00000365575 107 ntBASIC0.86□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR517B-201ENST00000385102 67 ntBASIC0.86□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR760-201ENST00000390220 80 ntBASIC0.86□□□□□ -2.27
PCDHGA11Q9Y5H2 SCARNA21.1-201ENST00000515996 128 ntBASIC0.86□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR548V-201ENST00000584165 80 ntBASIC0.86□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR6857-201ENST00000613267 93 ntBASIC0.86□□□□□ -2.27
PCDHGA11Q9Y5H2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
PCDHGA11Q9Y5H2 AC084368.1-201ENST00000620935 65 ntBASIC0.85□□□□□ -2.27
PCDHGA11Q9Y5H2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.84□□□□□ -2.27
PCDHGA11Q9Y5H2 SNORA25.5-201ENST00000363782 126 ntBASIC0.84□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR4677-201ENST00000584153 80 ntBASIC0.84□□□□□ -2.27
PCDHGA11Q9Y5H2 MIR6755-201ENST00000619993 66 ntBASIC0.84□□□□□ -2.27
PCDHGA11Q9Y5H2 RNA5SP128-201ENST00000365305 116 ntBASIC0.83□□□□□ -2.28
PCDHGA11Q9Y5H2 SNORD113-2-201ENST00000391082 72 ntBASIC0.83□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU7-188P-201ENST00000517063 64 ntBASIC0.83□□□□□ -2.28
PCDHGA11Q9Y5H2 U2.7-201ENST00000619197 100 ntBASIC0.83□□□□□ -2.28
PCDHGA11Q9Y5H2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
PCDHGA11Q9Y5H2 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU6-945P-201ENST00000383947 107 ntBASIC0.82□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU6-1232P-201ENST00000516299 86 ntBASIC0.82□□□□□ -2.28
PCDHGA11Q9Y5H2 MIR548AD-201ENST00000584780 82 ntBASIC0.82□□□□□ -2.28
PCDHGA11Q9Y5H2 MIR6734-201ENST00000621166 68 ntBASIC0.82□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU6-940P-201ENST00000363433 104 ntBASIC0.81□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU6-698P-201ENST00000363523 107 ntBASIC0.81□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU6-34P-201ENST00000364874 107 ntBASIC0.81□□□□□ -2.28
PCDHGA11Q9Y5H2 MIR501-201ENST00000390204 84 ntBASIC0.81□□□□□ -2.28
PCDHGA11Q9Y5H2 CYP3A54P-201ENST00000566950 75 ntBASIC0.81□□□□□ -2.28
PCDHGA11Q9Y5H2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
PCDHGA11Q9Y5H2 RNA5SP102-201ENST00000516865 106 ntBASIC0.8□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU6-92P-201ENST00000605893 104 ntBASIC0.8□□□□□ -2.28
PCDHGA11Q9Y5H2 MIR6504-201ENST00000613520 61 ntBASIC0.8□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU6-42P-201ENST00000384165 107 ntBASIC0.79□□□□□ -2.28
PCDHGA11Q9Y5H2 MIR630-201ENST00000384957 97 ntBASIC0.79□□□□□ -2.28
PCDHGA11Q9Y5H2 RNA5SP220-201ENST00000516298 104 ntBASIC0.79□□□□□ -2.28
PCDHGA11Q9Y5H2 MIR4452-201ENST00000583004 71 ntBASIC0.79□□□□□ -2.28
PCDHGA11Q9Y5H2 SNORD44.1-201ENST00000363202 61 ntBASIC0.78□□□□□ -2.28
PCDHGA11Q9Y5H2 SNORD114-27-201ENST00000363766 70 ntBASIC0.78□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU6-499P-201ENST00000365615 107 ntBASIC0.78□□□□□ -2.28
PCDHGA11Q9Y5H2 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU7-174P-201ENST00000516248 59 ntBASIC0.78□□□□□ -2.28
PCDHGA11Q9Y5H2 RNA5SP121-201ENST00000516537 101 ntBASIC0.78□□□□□ -2.28
PCDHGA11Q9Y5H2 RNU7-129P-201ENST00000516128 62 ntBASIC0.77□□□□□ -2.29
PCDHGA11Q9Y5H2 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
PCDHGA11Q9Y5H2 MIR3973-201ENST00000579824 107 ntBASIC0.77□□□□□ -2.29
PCDHGA11Q9Y5H2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
PCDHGA11Q9Y5H2 RNA5SP192-201ENST00000364404 120 ntBASIC0.76□□□□□ -2.29
PCDHGA11Q9Y5H2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.76□□□□□ -2.29
PCDHGA11Q9Y5H2 MIR1276-201ENST00000408707 83 ntBASIC0.76□□□□□ -2.29
PCDHGA11Q9Y5H2 AL021921.1-201ENST00000442774 93 ntBASIC0.76□□□□□ -2.29
PCDHGA11Q9Y5H2 snoU13.18-201ENST00000459483 104 ntBASIC0.76□□□□□ -2.29
PCDHGA11Q9Y5H2 MIR6767-201ENST00000637302 66 ntBASIC0.76□□□□□ -2.29
PCDHGA11Q9Y5H2 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
PCDHGA11Q9Y5H2 MIR96-201ENST00000362288 78 ntBASIC0.75□□□□□ -2.29
PCDHGA11Q9Y5H2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
PCDHGA11Q9Y5H2 RNU1-93P-201ENST00000364704 169 ntBASIC0.74□□□□□ -2.29
PCDHGA11Q9Y5H2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.74□□□□□ -2.29
PCDHGA11Q9Y5H2 RNU6-175P-201ENST00000516896 107 ntBASIC0.74□□□□□ -2.29
PCDHGA11Q9Y5H2 MIR499B-201ENST00000636498 73 ntBASIC0.74□□□□□ -2.29
PCDHGA11Q9Y5H2 MIR373-201ENST00000362273 69 ntBASIC0.73□□□□□ -2.29
PCDHGA11Q9Y5H2 SNORA9.1-201ENST00000362412 131 ntBASIC0.73□□□□□ -2.29
PCDHGA11Q9Y5H2 SNORA75.1-201ENST00000391130 148 ntBASIC0.73□□□□□ -2.29
PCDHGA11Q9Y5H2 MIR466-201ENST00000580653 84 ntBASIC0.73□□□□□ -2.29
PCDHGA11Q9Y5H2 Y_RNA.246-201ENST00000364495 108 ntBASIC0.71□□□□□ -2.3
PCDHGA11Q9Y5H2 SNORD114-22-201ENST00000365423 72 ntBASIC0.71□□□□□ -2.3
PCDHGA11Q9Y5H2 RNU6-1036P-201ENST00000383959 104 ntBASIC0.71□□□□□ -2.3
PCDHGA11Q9Y5H2 MIR1255B2-201ENST00000408618 67 ntBASIC0.71□□□□□ -2.3
PCDHGA11Q9Y5H2 AC243829.3-201ENST00000622177 108 ntBASIC0.71□□□□□ -2.3
PCDHGA11Q9Y5H2 MIR876-201ENST00000401147 81 ntBASIC0.7□□□□□ -2.3
PCDHGA11Q9Y5H2 RNU6-518P-201ENST00000516056 96 ntBASIC0.7□□□□□ -2.3
PCDHGA11Q9Y5H2 MIR3925-201ENST00000584674 77 ntBASIC0.7□□□□□ -2.3
PCDHGA11Q9Y5H2 MIR6773-201ENST00000612812 74 ntBASIC0.7□□□□□ -2.3
PCDHGA11Q9Y5H2 MIR7111-201ENST00000619751 72 ntBASIC0.7□□□□□ -2.3
PCDHGA11Q9Y5H2 RNU6-122P-201ENST00000516818 107 ntBASIC0.69□□□□□ -2.3
PCDHGA11Q9Y5H2 SNORA68.3-201ENST00000515906 83 ntBASIC0.68□□□□□ -2.3
PCDHGA11Q9Y5H2 RNA5SP470-201ENST00000516463 106 ntBASIC0.68□□□□□ -2.3
PCDHGA11Q9Y5H2 SCARNA11.2-201ENST00000517183 154 ntBASIC0.68□□□□□ -2.3
PCDHGA11Q9Y5H2 U4.4-201ENST00000620626 117 ntBASIC0.68□□□□□ -2.3
PCDHGA11Q9Y5H2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
PCDHGA11Q9Y5H2 SNORD115-25-201ENST00000362619 82 ntBASIC0.67□□□□□ -2.3
PCDHGA11Q9Y5H2 RN7SL660P-201ENST00000614852 299 ntBASIC0.67□□□□□ -2.3
PCDHGA11Q9Y5H2 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
PCDHGA11Q9Y5H2 AC090617.8-201ENST00000623339 167 ntBASIC0.67□□□□□ -2.3
PCDHGA11Q9Y5H2 MIR520E-201ENST00000384867 87 ntBASIC0.66□□□□□ -2.3
PCDHGA11Q9Y5H2 SNORA49-201ENST00000386157 136 ntBASIC0.66□□□□□ -2.3
PCDHGA11Q9Y5H2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.66□□□□□ -2.3
PCDHGA11Q9Y5H2 MIR103A1-201ENST00000362165 78 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms