Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SNORD124-201ENST00000459577 104 ntBASIC1.73□□□□□ -2.13
PCDHGA4Q9Y5G9 MIR548AG1-201ENST00000579932 66 ntBASIC1.73□□□□□ -2.13
PCDHGA4Q9Y5G9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
PCDHGA4Q9Y5G9 SNORD115-25-201ENST00000362619 82 ntBASIC1.72□□□□□ -2.13
PCDHGA4Q9Y5G9 TRMT112P2-201ENST00000512910 132 ntBASIC1.72□□□□□ -2.13
PCDHGA4Q9Y5G9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PCDHGA4Q9Y5G9 SNORA67.5-201ENST00000391036 107 ntBASIC1.71□□□□□ -2.14
PCDHGA4Q9Y5G9 RNA5SP470-201ENST00000516463 106 ntBASIC1.71□□□□□ -2.14
PCDHGA4Q9Y5G9 RNA5SP94-201ENST00000516917 108 ntBASIC1.71□□□□□ -2.14
PCDHGA4Q9Y5G9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
PCDHGA4Q9Y5G9 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
PCDHGA4Q9Y5G9 RNU6-337P-201ENST00000391243 106 ntBASIC1.7□□□□□ -2.14
PCDHGA4Q9Y5G9 HMGN2P22-201ENST00000427588 175 ntBASIC1.7□□□□□ -2.14
PCDHGA4Q9Y5G9 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
PCDHGA4Q9Y5G9 MIR4303-201ENST00000581299 66 ntBASIC1.7□□□□□ -2.14
PCDHGA4Q9Y5G9 RNU6-458P-201ENST00000384179 107 ntBASIC1.69□□□□□ -2.14
PCDHGA4Q9Y5G9 AC011195.1-201ENST00000578177 177 ntBASIC1.69□□□□□ -2.14
PCDHGA4Q9Y5G9 U6.58-201ENST00000613107 107 ntBASIC1.69□□□□□ -2.14
PCDHGA4Q9Y5G9 Y_RNA.355-201ENST00000365462 98 ntBASIC1.68□□□□□ -2.14
PCDHGA4Q9Y5G9 MIR6773-201ENST00000612812 74 ntBASIC1.68□□□□□ -2.14
PCDHGA4Q9Y5G9 MIR4255-201ENST00000579351 72 ntBASIC1.67□□□□□ -2.14
PCDHGA4Q9Y5G9 MIR4752-201ENST00000579672 72 ntBASIC1.67□□□□□ -2.14
PCDHGA4Q9Y5G9 MIR5706-201ENST00000579841 80 ntBASIC1.67□□□□□ -2.14
PCDHGA4Q9Y5G9 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
PCDHGA4Q9Y5G9 RNU7-160P-201ENST00000516660 62 ntBASIC1.66□□□□□ -2.14
PCDHGA4Q9Y5G9 Y_RNA.224-201ENST00000364308 111 ntBASIC1.65□□□□□ -2.15
PCDHGA4Q9Y5G9 SNORD114-29-201ENST00000364819 70 ntBASIC1.65□□□□□ -2.15
PCDHGA4Q9Y5G9 SNORD114-24-201ENST00000365029 72 ntBASIC1.65□□□□□ -2.15
PCDHGA4Q9Y5G9 SNORD99-201ENST00000408612 74 ntBASIC1.65□□□□□ -2.15
PCDHGA4Q9Y5G9 RNA5SP255-201ENST00000516370 107 ntBASIC1.65□□□□□ -2.15
PCDHGA4Q9Y5G9 RNU7-95P-201ENST00000459222 64 ntBASIC1.64□□□□□ -2.15
PCDHGA4Q9Y5G9 BX248123.2-201ENST00000606318 124 ntBASIC1.64□□□□□ -2.15
PCDHGA4Q9Y5G9 MIR150-201ENST00000385048 84 ntBASIC1.63□□□□□ -2.15
PCDHGA4Q9Y5G9 RPS29P23-201ENST00000458635 123 ntBASIC1.63□□□□□ -2.15
PCDHGA4Q9Y5G9 RNU6-1206P-201ENST00000516339 103 ntBASIC1.63□□□□□ -2.15
PCDHGA4Q9Y5G9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.62□□□□□ -2.15
PCDHGA4Q9Y5G9 RNU6-924P-201ENST00000362926 108 ntBASIC1.62□□□□□ -2.15
PCDHGA4Q9Y5G9 RNY1P8-201ENST00000383970 114 ntBASIC1.62□□□□□ -2.15
PCDHGA4Q9Y5G9 MIR579-201ENST00000385221 98 ntBASIC1.62□□□□□ -2.15
PCDHGA4Q9Y5G9 MIRLET7B-201ENST00000385140 83 ntBASIC1.6□□□□□ -2.15
PCDHGA4Q9Y5G9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.6□□□□□ -2.15
PCDHGA4Q9Y5G9 MIR489-201ENST00000384923 84 ntBASIC1.59□□□□□ -2.15
PCDHGA4Q9Y5G9 MIR618-201ENST00000385287 98 ntBASIC1.59□□□□□ -2.15
PCDHGA4Q9Y5G9 SNORA49-201ENST00000386157 136 ntBASIC1.59□□□□□ -2.15
PCDHGA4Q9Y5G9 RNU6-1250P-201ENST00000391218 107 ntBASIC1.59□□□□□ -2.15
PCDHGA4Q9Y5G9 RNU1-29P-201ENST00000606574 126 ntBASIC1.59□□□□□ -2.15
PCDHGA4Q9Y5G9 Y_RNA.69-201ENST00000362885 109 ntBASIC1.58□□□□□ -2.16
PCDHGA4Q9Y5G9 RNU7-151P-201ENST00000516930 53 ntBASIC1.58□□□□□ -2.16
PCDHGA4Q9Y5G9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.57□□□□□ -2.16
PCDHGA4Q9Y5G9 RNU7-188P-201ENST00000517063 64 ntBASIC1.57□□□□□ -2.16
PCDHGA4Q9Y5G9 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
PCDHGA4Q9Y5G9 U7.6-201ENST00000610841 64 ntBASIC1.57□□□□□ -2.16
PCDHGA4Q9Y5G9 MIR7974-201ENST00000615835 79 ntBASIC1.57□□□□□ -2.16
PCDHGA4Q9Y5G9 RNU6-598P-201ENST00000364017 105 ntBASIC1.56□□□□□ -2.16
PCDHGA4Q9Y5G9 RNU6-392P-201ENST00000364926 101 ntBASIC1.56□□□□□ -2.16
PCDHGA4Q9Y5G9 MIR548AL-201ENST00000578416 97 ntBASIC1.56□□□□□ -2.16
PCDHGA4Q9Y5G9 RNA5SP222-201ENST00000411039 105 ntBASIC1.55□□□□□ -2.16
PCDHGA4Q9Y5G9 snoU13.18-201ENST00000459483 104 ntBASIC1.55□□□□□ -2.16
PCDHGA4Q9Y5G9 RNU1-124P-201ENST00000363861 145 ntBASIC1.54□□□□□ -2.16
PCDHGA4Q9Y5G9 MIR329-2-201ENST00000385029 84 ntBASIC1.54□□□□□ -2.16
PCDHGA4Q9Y5G9 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
PCDHGA4Q9Y5G9 RNU6-782P-201ENST00000516852 104 ntBASIC1.54□□□□□ -2.16
PCDHGA4Q9Y5G9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
PCDHGA4Q9Y5G9 U2.18-201ENST00000622185 84 ntBASIC1.54□□□□□ -2.16
PCDHGA4Q9Y5G9 RNU6-502P-201ENST00000362419 108 ntBASIC1.53□□□□□ -2.16
PCDHGA4Q9Y5G9 RNU1-42P-201ENST00000364033 160 ntBASIC1.53□□□□□ -2.16
PCDHGA4Q9Y5G9 SNORD26-201ENST00000384147 75 ntBASIC1.53□□□□□ -2.16
PCDHGA4Q9Y5G9 MIR1276-201ENST00000408707 83 ntBASIC1.53□□□□□ -2.16
PCDHGA4Q9Y5G9 RNU6-955P-201ENST00000410497 104 ntBASIC1.53□□□□□ -2.16
PCDHGA4Q9Y5G9 AC069271.1-201ENST00000445577 156 ntBASIC1.53□□□□□ -2.16
PCDHGA4Q9Y5G9 RNA5SP404-201ENST00000517118 132 ntBASIC1.53□□□□□ -2.16
PCDHGA4Q9Y5G9 RNU6-986P-201ENST00000363133 102 ntBASIC1.52□□□□□ -2.17
PCDHGA4Q9Y5G9 RNU6-696P-201ENST00000390834 107 ntBASIC1.52□□□□□ -2.17
PCDHGA4Q9Y5G9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.52□□□□□ -2.17
PCDHGA4Q9Y5G9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.52□□□□□ -2.17
PCDHGA4Q9Y5G9 RNU6-175P-201ENST00000516896 107 ntBASIC1.52□□□□□ -2.17
PCDHGA4Q9Y5G9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.51□□□□□ -2.17
PCDHGA4Q9Y5G9 RNU6-828P-201ENST00000364876 107 ntBASIC1.51□□□□□ -2.17
PCDHGA4Q9Y5G9 RNU6-724P-201ENST00000390958 105 ntBASIC1.51□□□□□ -2.17
PCDHGA4Q9Y5G9 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
PCDHGA4Q9Y5G9 RNU6-995P-201ENST00000391244 107 ntBASIC1.51□□□□□ -2.17
PCDHGA4Q9Y5G9 MIR6504-201ENST00000613520 61 ntBASIC1.51□□□□□ -2.17
PCDHGA4Q9Y5G9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
PCDHGA4Q9Y5G9 SNORA2A-201ENST00000383885 135 ntBASIC1.5□□□□□ -2.17
PCDHGA4Q9Y5G9 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.5□□□□□ -2.17
PCDHGA4Q9Y5G9 RNU6-939P-201ENST00000384634 107 ntBASIC1.49□□□□□ -2.17
PCDHGA4Q9Y5G9 MIR548AA1-201ENST00000384971 97 ntBASIC1.49□□□□□ -2.17
PCDHGA4Q9Y5G9 AL451105.1-201ENST00000450005 189 ntBASIC1.49□□□□□ -2.17
PCDHGA4Q9Y5G9 AL353803.5-201ENST00000599815 141 ntBASIC1.49□□□□□ -2.17
PCDHGA4Q9Y5G9 RNA5SP517-201ENST00000364724 117 ntBASIC1.48□□□□□ -2.17
PCDHGA4Q9Y5G9 RNU6-1036P-201ENST00000383959 104 ntBASIC1.48□□□□□ -2.17
PCDHGA4Q9Y5G9 RNU6-229P-201ENST00000516614 102 ntBASIC1.48□□□□□ -2.17
PCDHGA4Q9Y5G9 MIR4421-201ENST00000578133 69 ntBASIC1.47□□□□□ -2.17
PCDHGA4Q9Y5G9 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
PCDHGA4Q9Y5G9 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
PCDHGA4Q9Y5G9 RNU6-1262P-201ENST00000516217 96 ntBASIC1.46□□□□□ -2.18
PCDHGA4Q9Y5G9 SNORA31.24-201ENST00000517232 57 ntBASIC1.46□□□□□ -2.18
PCDHGA4Q9Y5G9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
PCDHGA4Q9Y5G9 MIR125B1-201ENST00000385236 88 ntBASIC1.45□□□□□ -2.18
PCDHGA4Q9Y5G9 MIR320A-201ENST00000385302 82 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 231.6 ms