Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MIR4464-201ENST00000580818 92 ntBASIC-0.61□□□□□ -2.51
CCDC88CQ9P219 RNU6-824P-201ENST00000363724 104 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 MIR548I1-201ENST00000408810 149 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 FGF7P7-201ENST00000514120 227 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 RNU7-200P-201ENST00000516105 62 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 AP002795.1-201ENST00000534879 84 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 AC103810.7-201ENST00000607821 91 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 AL035470.1-201ENST00000622571 220 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 RNU6-463P-201ENST00000384340 107 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 SNORD33.1-201ENST00000516213 88 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 RNU6-971P-201ENST00000516920 106 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 RNU6-537P-201ENST00000517277 103 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 MIR4499-201ENST00000584834 69 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 MIR4719-201ENST00000585233 84 ntBASIC-0.62□□□□□ -2.51
CCDC88CQ9P219 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.63□□□□□ -2.51
CCDC88CQ9P219 RNU6-681P-201ENST00000364012 104 ntBASIC-0.63□□□□□ -2.51
CCDC88CQ9P219 RNU7-88P-201ENST00000458752 63 ntBASIC-0.63□□□□□ -2.51
CCDC88CQ9P219 RNU6-412P-201ENST00000516434 106 ntBASIC-0.63□□□□□ -2.51
CCDC88CQ9P219 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 RNA5SP192-201ENST00000364404 120 ntBASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 RNU6-644P-201ENST00000391155 98 ntBASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 MIR6738-201ENST00000619620 64 ntBASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 SNORA63.6-201ENST00000364921 119 ntBASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 MIR548A3-201ENST00000385297 97 ntBASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 SNORA26.4-201ENST00000391188 123 ntBASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 RNU2-51P-201ENST00000410708 197 ntBASIC-0.64□□□□□ -2.51
CCDC88CQ9P219 SNORD115-27-201ENST00000364430 82 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 SNORA62.4-201ENST00000365504 151 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 MIR569-201ENST00000385228 96 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 RNU6-907P-201ENST00000390924 102 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 RNU6-887P-201ENST00000410660 100 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 RNU7-154P-201ENST00000516194 62 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 RNU6-182P-201ENST00000516970 105 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 AC140658.3-201ENST00000567603 271 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 AL353803.5-201ENST00000599815 141 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 MIR6129-201ENST00000616087 109 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 AC012531.4-201ENST00000616509 177 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 RNU6-924P-201ENST00000362926 108 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 RNU6-774P-201ENST00000363238 107 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 SNORD116-10-201ENST00000363791 102 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 AL158147.1-201ENST00000443970 75 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 U6.96-201ENST00000636425 70 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 MIR4773-1-201ENST00000637203 78 ntBASIC-0.65□□□□□ -2.51
CCDC88CQ9P219 RNU6-959P-201ENST00000384671 107 ntBASIC-0.66□□□□□ -2.52
CCDC88CQ9P219 RNU6-813P-201ENST00000384691 107 ntBASIC-0.66□□□□□ -2.52
CCDC88CQ9P219 AL035461.1-201ENST00000421490 332 ntBASIC-0.66□□□□□ -2.52
CCDC88CQ9P219 RNU6-274P-201ENST00000459566 107 ntBASIC-0.66□□□□□ -2.52
CCDC88CQ9P219 AC021146.9-201ENST00000512503 156 ntBASIC-0.66□□□□□ -2.52
CCDC88CQ9P219 SCARNA23-201ENST00000516060 130 ntBASIC-0.66□□□□□ -2.52
CCDC88CQ9P219 MIR4796-201ENST00000580742 81 ntBASIC-0.66□□□□□ -2.52
CCDC88CQ9P219 MIR4320-201ENST00000636981 65 ntBASIC-0.66□□□□□ -2.52
CCDC88CQ9P219 SNORD114-3-201ENST00000364969 75 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 AL500527.2-201ENST00000454105 95 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 RNU7-134P-201ENST00000458997 64 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 RNU6-656P-201ENST00000516785 107 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 MIR3675-201ENST00000583661 73 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 AL157777.2-201ENST00000258070 137 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 RNU6-24P-201ENST00000384440 107 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 MIR4324-201ENST00000584846 72 ntBASIC-0.67□□□□□ -2.52
CCDC88CQ9P219 RNU5F-1-201ENST00000362507 117 ntBASIC-0.68□□□□□ -2.52
CCDC88CQ9P219 SNORD115-22-201ENST00000364456 82 ntBASIC-0.68□□□□□ -2.52
CCDC88CQ9P219 MIR519C-201ENST00000385053 87 ntBASIC-0.68□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.68□□□□□ -2.52
CCDC88CQ9P219 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.68□□□□□ -2.52
CCDC88CQ9P219 SCARNA18B-201ENST00000458806 135 ntBASIC-0.68□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.69□□□□□ -2.52
CCDC88CQ9P219 SNORD90-201ENST00000391145 111 ntBASIC-0.69□□□□□ -2.52
CCDC88CQ9P219 MIR8485-201ENST00000401372 91 ntBASIC-0.69□□□□□ -2.52
CCDC88CQ9P219 RNU6-346P-201ENST00000516288 111 ntBASIC-0.69□□□□□ -2.52
CCDC88CQ9P219 RNU7-153P-201ENST00000516455 62 ntBASIC-0.69□□□□□ -2.52
CCDC88CQ9P219 AC026421.1-201ENST00000519101 163 ntBASIC-0.69□□□□□ -2.52
CCDC88CQ9P219 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
CCDC88CQ9P219 RNU6-340P-201ENST00000364005 107 ntBASIC-0.7□□□□□ -2.52
CCDC88CQ9P219 RNU6-886P-201ENST00000384319 105 ntBASIC-0.7□□□□□ -2.52
CCDC88CQ9P219 RNU6-106P-201ENST00000384405 107 ntBASIC-0.7□□□□□ -2.52
CCDC88CQ9P219 MIR4490-201ENST00000582647 84 ntBASIC-0.7□□□□□ -2.52
CCDC88CQ9P219 AC006254.2-201ENST00000603259 279 ntBASIC-0.7□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 MIR1236-201ENST00000408340 102 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 snoU83B.1-201ENST00000517136 88 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 RNA5SP461-201ENST00000516451 104 ntBASIC-0.71□□□□□ -2.52
CCDC88CQ9P219 MIR3165-201ENST00000579874 75 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms