Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-781P-201ENST00000516377 101 ntBASIC-1.82□□□□□ -2.7
VAPAQ9P0L0 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.82□□□□□ -2.7
VAPAQ9P0L0 MIR4756-201ENST00000577874 78 ntBASIC-1.82□□□□□ -2.7
VAPAQ9P0L0 MIR4441-201ENST00000582623 100 ntBASIC-1.82□□□□□ -2.7
VAPAQ9P0L0 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.83□□□□□ -2.7
VAPAQ9P0L0 RNU6-460P-201ENST00000391158 108 ntBASIC-1.83□□□□□ -2.7
VAPAQ9P0L0 RNU6-519P-201ENST00000410590 108 ntBASIC-1.83□□□□□ -2.7
VAPAQ9P0L0 AC022559.1-201ENST00000520905 205 ntBASIC-1.83□□□□□ -2.7
VAPAQ9P0L0 RNU6-832P-201ENST00000363319 107 ntBASIC-1.84□□□□□ -2.7
VAPAQ9P0L0 RNU4-11P-201ENST00000365287 132 ntBASIC-1.84□□□□□ -2.7
VAPAQ9P0L0 RNU6-644P-201ENST00000391155 98 ntBASIC-1.84□□□□□ -2.7
VAPAQ9P0L0 U6.81-201ENST00000612550 106 ntBASIC-1.84□□□□□ -2.7
VAPAQ9P0L0 RNU5F-1-201ENST00000362507 117 ntBASIC-1.85□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.85□□□□□ -2.71
VAPAQ9P0L0 RNU6-563P-201ENST00000364872 108 ntBASIC-1.85□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.85□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.85□□□□□ -2.71
VAPAQ9P0L0 MIR548F4-201ENST00000408515 105 ntBASIC-1.85□□□□□ -2.71
VAPAQ9P0L0 U2.7-201ENST00000619197 100 ntBASIC-1.85□□□□□ -2.71
VAPAQ9P0L0 RNY4P6-201ENST00000363667 96 ntBASIC-1.86□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.86□□□□□ -2.71
VAPAQ9P0L0 RNU6-695P-201ENST00000391157 104 ntBASIC-1.86□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.86□□□□□ -2.71
VAPAQ9P0L0 RNU6-656P-201ENST00000516785 107 ntBASIC-1.86□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.86□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.86□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.87□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.87□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.87□□□□□ -2.71
VAPAQ9P0L0 MTCYBP6-201ENST00000441810 138 ntBASIC-1.87□□□□□ -2.71
VAPAQ9P0L0 MIR4694-201ENST00000578534 80 ntBASIC-1.87□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.88□□□□□ -2.71
VAPAQ9P0L0 RNU6-458P-201ENST00000384179 107 ntBASIC-1.88□□□□□ -2.71
VAPAQ9P0L0 RNU6-813P-201ENST00000384691 107 ntBASIC-1.88□□□□□ -2.71
VAPAQ9P0L0 RNU7-197P-201ENST00000458836 62 ntBASIC-1.88□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.88□□□□□ -2.71
VAPAQ9P0L0 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.88□□□□□ -2.71
VAPAQ9P0L0 U6.58-201ENST00000613107 107 ntBASIC-1.88□□□□□ -2.71
VAPAQ9P0L0 MIR548C-201ENST00000384815 97 ntBASIC-1.89□□□□□ -2.71
VAPAQ9P0L0 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.89□□□□□ -2.71
VAPAQ9P0L0 AC120024.2-201ENST00000576526 175 ntBASIC-1.89□□□□□ -2.71
VAPAQ9P0L0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.89□□□□□ -2.71
VAPAQ9P0L0 AC044792.1-201ENST00000593294 196 ntBASIC-1.89□□□□□ -2.71
VAPAQ9P0L0 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.9□□□□□ -2.71
VAPAQ9P0L0 MIR3128-201ENST00000581957 66 ntBASIC-1.9□□□□□ -2.71
VAPAQ9P0L0 MIR3123-201ENST00000583417 75 ntBASIC-1.9□□□□□ -2.71
VAPAQ9P0L0 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.91□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.91□□□□□ -2.72
VAPAQ9P0L0 RNY3P2-201ENST00000362918 102 ntBASIC-1.91□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.91□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.91□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.91□□□□□ -2.72
VAPAQ9P0L0 RNU6-111P-201ENST00000517179 105 ntBASIC-1.91□□□□□ -2.72
VAPAQ9P0L0 AL035470.1-201ENST00000622571 220 ntBASIC-1.91□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.92□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.92□□□□□ -2.72
VAPAQ9P0L0 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.92□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.93□□□□□ -2.72
VAPAQ9P0L0 RNU6-598P-201ENST00000364017 105 ntBASIC-1.93□□□□□ -2.72
VAPAQ9P0L0 RNU6-696P-201ENST00000390834 107 ntBASIC-1.93□□□□□ -2.72
VAPAQ9P0L0 AL117187.1-201ENST00000555482 181 ntBASIC-1.93□□□□□ -2.72
VAPAQ9P0L0 MIR4777-201ENST00000583710 86 ntBASIC-1.93□□□□□ -2.72
VAPAQ9P0L0 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.93□□□□□ -2.72
VAPAQ9P0L0 MIR548AM-201ENST00000584298 74 ntBASIC-1.93□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 SNORD114-3-201ENST00000364969 75 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 RNU6-795P-201ENST00000516323 103 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 RNU6-807P-201ENST00000516805 107 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 RNU6-980P-201ENST00000516925 103 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 U4.2-201ENST00000618561 85 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 AC141273.2-201ENST00000618989 130 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 U2.18-201ENST00000622185 84 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 MIR664B-201ENST00000626756 61 ntBASIC-1.94□□□□□ -2.72
VAPAQ9P0L0 SNORD45B-201ENST00000364617 72 ntBASIC-1.95□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.95□□□□□ -2.72
VAPAQ9P0L0 RNU4-88P-201ENST00000411220 86 ntBASIC-1.95□□□□□ -2.72
VAPAQ9P0L0 MIR4796-201ENST00000580742 81 ntBASIC-1.95□□□□□ -2.72
VAPAQ9P0L0 MIR4439-201ENST00000583746 80 ntBASIC-1.95□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.96□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.96□□□□□ -2.72
VAPAQ9P0L0 RNU6-258P-201ENST00000390884 101 ntBASIC-1.96□□□□□ -2.72
VAPAQ9P0L0 AL158147.1-201ENST00000443970 75 ntBASIC-1.96□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.96□□□□□ -2.72
VAPAQ9P0L0 AC072026.1-201ENST00000605023 201 ntBASIC-1.96□□□□□ -2.72
VAPAQ9P0L0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.96□□□□□ -2.72
VAPAQ9P0L0 AC025166.1-201ENST00000612411 163 ntBASIC-1.96□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.97□□□□□ -2.72
VAPAQ9P0L0 SNORA20.1-201ENST00000364790 130 ntBASIC-1.97□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.97□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.97□□□□□ -2.72
VAPAQ9P0L0 RNU6-841P-201ENST00000383872 107 ntBASIC-1.97□□□□□ -2.72
VAPAQ9P0L0 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.97□□□□□ -2.72
VAPAQ9P0L0 AL035461.1-201ENST00000421490 332 ntBASIC-1.97□□□□□ -2.72
VAPAQ9P0L0 AL118496.2-201ENST00000448300 230 ntBASIC-1.97□□□□□ -2.72
VAPAQ9P0L0 AC012531.4-201ENST00000616509 177 ntBASIC-1.97□□□□□ -2.72
VAPAQ9P0L0 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.98□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.98□□□□□ -2.73
VAPAQ9P0L0 RNU6-645P-201ENST00000364649 106 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms