Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 MIR548X-201ENST00000580069 75 ntBASIC1.29□□□□□ -2.2
LMCD1Q9NZU5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.29□□□□□ -2.2
LMCD1Q9NZU5 SNORA9.1-201ENST00000362412 131 ntBASIC1.28□□□□□ -2.2
LMCD1Q9NZU5 RNU6-716P-201ENST00000365621 103 ntBASIC1.28□□□□□ -2.2
LMCD1Q9NZU5 SNORD116-16-201ENST00000384533 92 ntBASIC1.28□□□□□ -2.2
LMCD1Q9NZU5 MIR545-201ENST00000385085 106 ntBASIC1.28□□□□□ -2.2
LMCD1Q9NZU5 MIR758-201ENST00000390227 88 ntBASIC1.28□□□□□ -2.2
LMCD1Q9NZU5 RNU6-269P-201ENST00000391077 97 ntBASIC1.28□□□□□ -2.2
LMCD1Q9NZU5 SNORD116.2-201ENST00000391251 93 ntBASIC1.28□□□□□ -2.2
LMCD1Q9NZU5 SNORD124-201ENST00000459577 104 ntBASIC1.28□□□□□ -2.2
LMCD1Q9NZU5 RNA5SP47-201ENST00000517230 109 ntBASIC1.28□□□□□ -2.2
LMCD1Q9NZU5 SNORD18A-201ENST00000363753 72 ntBASIC1.27□□□□□ -2.21
LMCD1Q9NZU5 MIR548E-201ENST00000408287 88 ntBASIC1.27□□□□□ -2.21
LMCD1Q9NZU5 U7.7-201ENST00000459276 60 ntBASIC1.27□□□□□ -2.21
LMCD1Q9NZU5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
LMCD1Q9NZU5 Y_RNA.374-201ENST00000365606 101 ntBASIC1.26□□□□□ -2.21
LMCD1Q9NZU5 SNORA8.2-201ENST00000384372 139 ntBASIC1.26□□□□□ -2.21
LMCD1Q9NZU5 FABP5P4-201ENST00000437203 171 ntBASIC1.26□□□□□ -2.21
LMCD1Q9NZU5 SCARNA17.3-201ENST00000516381 125 ntBASIC1.26□□□□□ -2.21
LMCD1Q9NZU5 MIR3678-201ENST00000578455 94 ntBASIC1.26□□□□□ -2.21
LMCD1Q9NZU5 RNU6-838P-201ENST00000363399 108 ntBASIC1.25□□□□□ -2.21
LMCD1Q9NZU5 MIR652-201ENST00000385278 98 ntBASIC1.25□□□□□ -2.21
LMCD1Q9NZU5 MIR5000-201ENST00000577717 103 ntBASIC1.25□□□□□ -2.21
LMCD1Q9NZU5 MIR548AE1-201ENST00000583292 70 ntBASIC1.25□□□□□ -2.21
LMCD1Q9NZU5 AC090617.8-201ENST00000623339 167 ntBASIC1.25□□□□□ -2.21
LMCD1Q9NZU5 SNORA25.8-201ENST00000364831 128 ntBASIC1.24□□□□□ -2.21
LMCD1Q9NZU5 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
LMCD1Q9NZU5 SNORA40B-201ENST00000385573 128 ntBASIC1.24□□□□□ -2.21
LMCD1Q9NZU5 MIR3612-201ENST00000579753 87 ntBASIC1.24□□□□□ -2.21
LMCD1Q9NZU5 RN7SL793P-201ENST00000583259 296 ntBASIC1.24□□□□□ -2.21
LMCD1Q9NZU5 MIR7110-201ENST00000612638 86 ntBASIC1.24□□□□□ -2.21
LMCD1Q9NZU5 AL162376.1-201ENST00000624117 175 ntBASIC1.24□□□□□ -2.21
LMCD1Q9NZU5 Y_RNA.74-201ENST00000362911 99 ntBASIC1.23□□□□□ -2.21
LMCD1Q9NZU5 Y_RNA.282-201ENST00000364793 102 ntBASIC1.23□□□□□ -2.21
LMCD1Q9NZU5 MIR19B1-201ENST00000384829 87 ntBASIC1.23□□□□□ -2.21
LMCD1Q9NZU5 SNORD1B-201ENST00000363091 84 ntBASIC1.21□□□□□ -2.22
LMCD1Q9NZU5 RNU6-810P-201ENST00000364001 107 ntBASIC1.21□□□□□ -2.22
LMCD1Q9NZU5 Y_RNA.407-201ENST00000383986 113 ntBASIC1.21□□□□□ -2.22
LMCD1Q9NZU5 MIR573-201ENST00000384964 99 ntBASIC1.21□□□□□ -2.22
LMCD1Q9NZU5 RNU6-1250P-201ENST00000391218 107 ntBASIC1.21□□□□□ -2.22
LMCD1Q9NZU5 CYP3A54P-201ENST00000566950 75 ntBASIC1.21□□□□□ -2.22
LMCD1Q9NZU5 MIR548AG1-201ENST00000579932 66 ntBASIC1.21□□□□□ -2.22
LMCD1Q9NZU5 MIR200A-201ENST00000384875 90 ntBASIC1.2□□□□□ -2.22
LMCD1Q9NZU5 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.2□□□□□ -2.22
LMCD1Q9NZU5 AL021921.1-201ENST00000442774 93 ntBASIC1.2□□□□□ -2.22
LMCD1Q9NZU5 RNU6-518P-201ENST00000516056 96 ntBASIC1.2□□□□□ -2.22
LMCD1Q9NZU5 SCARNA16.5-201ENST00000517114 183 ntBASIC1.2□□□□□ -2.22
LMCD1Q9NZU5 AC211469.2-201ENST00000605461 205 ntBASIC1.2□□□□□ -2.22
LMCD1Q9NZU5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.19□□□□□ -2.22
LMCD1Q9NZU5 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
LMCD1Q9NZU5 RNA5SP436-201ENST00000516020 115 ntBASIC1.19□□□□□ -2.22
LMCD1Q9NZU5 AC243829.3-201ENST00000622177 108 ntBASIC1.19□□□□□ -2.22
LMCD1Q9NZU5 MIR373-201ENST00000362273 69 ntBASIC1.18□□□□□ -2.22
LMCD1Q9NZU5 MIR516B1-201ENST00000385211 90 ntBASIC1.18□□□□□ -2.22
LMCD1Q9NZU5 RNU6-172P-201ENST00000411000 93 ntBASIC1.18□□□□□ -2.22
LMCD1Q9NZU5 RNU6-419P-201ENST00000517030 63 ntBASIC1.18□□□□□ -2.22
LMCD1Q9NZU5 MIR4490-201ENST00000582647 84 ntBASIC1.18□□□□□ -2.22
LMCD1Q9NZU5 MIR6857-201ENST00000613267 93 ntBASIC1.18□□□□□ -2.22
LMCD1Q9NZU5 MIR6828-201ENST00000636181 60 ntBASIC1.18□□□□□ -2.22
LMCD1Q9NZU5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
LMCD1Q9NZU5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
LMCD1Q9NZU5 MIR519A2-201ENST00000384990 87 ntBASIC1.17□□□□□ -2.22
LMCD1Q9NZU5 MIR216A-201ENST00000385063 110 ntBASIC1.17□□□□□ -2.22
LMCD1Q9NZU5 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
LMCD1Q9NZU5 AC011195.1-201ENST00000578177 177 ntBASIC1.17□□□□□ -2.22
LMCD1Q9NZU5 MIR4473-201ENST00000583731 91 ntBASIC1.17□□□□□ -2.22
LMCD1Q9NZU5 RNU6-924P-201ENST00000362926 108 ntBASIC1.16□□□□□ -2.22
LMCD1Q9NZU5 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
LMCD1Q9NZU5 MIR527-201ENST00000385244 85 ntBASIC1.16□□□□□ -2.22
LMCD1Q9NZU5 SNORD99-201ENST00000408612 74 ntBASIC1.16□□□□□ -2.22
LMCD1Q9NZU5 CYP3A137P-201ENST00000562436 69 ntBASIC1.16□□□□□ -2.22
LMCD1Q9NZU5 AC025627.3-201ENST00000582078 182 ntBASIC1.16□□□□□ -2.22
LMCD1Q9NZU5 U6.96-201ENST00000636425 70 ntBASIC1.16□□□□□ -2.22
LMCD1Q9NZU5 RNU6-247P-201ENST00000362636 107 ntBASIC1.15□□□□□ -2.23
LMCD1Q9NZU5 RNU6-986P-201ENST00000363133 102 ntBASIC1.15□□□□□ -2.23
LMCD1Q9NZU5 SNORD114-24-201ENST00000365029 72 ntBASIC1.15□□□□□ -2.23
LMCD1Q9NZU5 RNU6-246P-201ENST00000384702 107 ntBASIC1.15□□□□□ -2.23
LMCD1Q9NZU5 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
LMCD1Q9NZU5 MIR1255B2-201ENST00000408618 67 ntBASIC1.14□□□□□ -2.23
LMCD1Q9NZU5 RNA5SP227-201ENST00000516184 113 ntBASIC1.14□□□□□ -2.23
LMCD1Q9NZU5 MIR18A-201ENST00000362310 71 ntBASIC1.13□□□□□ -2.23
LMCD1Q9NZU5 Y_RNA.109-201ENST00000363215 102 ntBASIC1.13□□□□□ -2.23
LMCD1Q9NZU5 AC006210.1-201ENST00000424882 111 ntBASIC1.13□□□□□ -2.23
LMCD1Q9NZU5 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
LMCD1Q9NZU5 RNA5SP255-201ENST00000516370 107 ntBASIC1.13□□□□□ -2.23
LMCD1Q9NZU5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.13□□□□□ -2.23
LMCD1Q9NZU5 SNORA36.1-201ENST00000363424 132 ntBASIC1.12□□□□□ -2.23
LMCD1Q9NZU5 MIR532-201ENST00000385025 91 ntBASIC1.12□□□□□ -2.23
LMCD1Q9NZU5 RNU6-724P-201ENST00000390958 105 ntBASIC1.12□□□□□ -2.23
LMCD1Q9NZU5 AC243829.6-201ENST00000612652 106 ntBASIC1.12□□□□□ -2.23
LMCD1Q9NZU5 RNU6-337P-201ENST00000391243 106 ntBASIC1.11□□□□□ -2.23
LMCD1Q9NZU5 SNORD110-201ENST00000408189 75 ntBASIC1.11□□□□□ -2.23
LMCD1Q9NZU5 RNU7-154P-201ENST00000516194 62 ntBASIC1.1□□□□□ -2.23
LMCD1Q9NZU5 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.1□□□□□ -2.23
LMCD1Q9NZU5 SNORA70.25-201ENST00000612741 95 ntBASIC1.1□□□□□ -2.23
LMCD1Q9NZU5 RNA5SP457-201ENST00000363657 124 ntBASIC1.09□□□□□ -2.23
LMCD1Q9NZU5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
LMCD1Q9NZU5 RNA5SP222-201ENST00000411039 105 ntBASIC1.09□□□□□ -2.23
LMCD1Q9NZU5 RNA5SP268-201ENST00000516828 124 ntBASIC1.09□□□□□ -2.23
LMCD1Q9NZU5 RNU1-29P-201ENST00000606574 126 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 255.8 ms