Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.31□□□□□ -2.62
USP42Q9H9J4 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.31□□□□□ -2.62
USP42Q9H9J4 RNU6-519P-201ENST00000410590 108 ntBASIC-1.31□□□□□ -2.62
USP42Q9H9J4 RNU7-120P-201ENST00000459334 63 ntBASIC-1.31□□□□□ -2.62
USP42Q9H9J4 SNORA18.5-201ENST00000516616 101 ntBASIC-1.31□□□□□ -2.62
USP42Q9H9J4 MIR3657-201ENST00000584818 117 ntBASIC-1.31□□□□□ -2.62
USP42Q9H9J4 MIR6874-201ENST00000635894 71 ntBASIC-1.31□□□□□ -2.62
USP42Q9H9J4 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.32□□□□□ -2.62
USP42Q9H9J4 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.32□□□□□ -2.62
USP42Q9H9J4 RNU6-164P-201ENST00000364604 103 ntBASIC-1.32□□□□□ -2.62
USP42Q9H9J4 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.32□□□□□ -2.62
USP42Q9H9J4 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.32□□□□□ -2.62
USP42Q9H9J4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
USP42Q9H9J4 MIR1302-3-201ENST00000408128 138 ntBASIC-1.32□□□□□ -2.62
USP42Q9H9J4 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.32□□□□□ -2.62
USP42Q9H9J4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.32□□□□□ -2.62
USP42Q9H9J4 MIR548X2-201ENST00000579776 100 ntBASIC-1.32□□□□□ -2.62
USP42Q9H9J4 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 SNORA2.1-201ENST00000363089 137 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 RNU6-824P-201ENST00000363724 104 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 SNORD45B-201ENST00000364617 72 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 SNORD116-18-201ENST00000383961 92 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 RNU6-813P-201ENST00000384691 107 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 RNA5SP86-201ENST00000390869 98 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 MIR548I1-201ENST00000408810 149 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 AL118496.2-201ENST00000448300 230 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 RNU6-412P-201ENST00000516434 106 ntBASIC-1.33□□□□□ -2.62
USP42Q9H9J4 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.34□□□□□ -2.62
USP42Q9H9J4 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.34□□□□□ -2.62
USP42Q9H9J4 RNU6-394P-201ENST00000410735 107 ntBASIC-1.34□□□□□ -2.62
USP42Q9H9J4 AL691482.2-201ENST00000457453 84 ntBASIC-1.34□□□□□ -2.62
USP42Q9H9J4 MIR4679-2-201ENST00000578358 77 ntBASIC-1.34□□□□□ -2.62
USP42Q9H9J4 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.34□□□□□ -2.62
USP42Q9H9J4 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.34□□□□□ -2.62
USP42Q9H9J4 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.34□□□□□ -2.62
USP42Q9H9J4 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.34□□□□□ -2.62
USP42Q9H9J4 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.34□□□□□ -2.62
USP42Q9H9J4 MIR569-201ENST00000385228 96 ntBASIC-1.35□□□□□ -2.63
USP42Q9H9J4 RNA5SP272-201ENST00000516095 111 ntBASIC-1.35□□□□□ -2.63
USP42Q9H9J4 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.36□□□□□ -2.63
USP42Q9H9J4 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.36□□□□□ -2.63
USP42Q9H9J4 MTND3P2-201ENST00000438452 342 ntBASIC-1.36□□□□□ -2.63
USP42Q9H9J4 AL353691.2-201ENST00000443795 59 ntBASIC-1.36□□□□□ -2.63
USP42Q9H9J4 MIR4777-201ENST00000583710 86 ntBASIC-1.36□□□□□ -2.63
USP42Q9H9J4 RNU5F-1-201ENST00000362507 117 ntBASIC-1.37□□□□□ -2.63
USP42Q9H9J4 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.37□□□□□ -2.63
USP42Q9H9J4 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.37□□□□□ -2.63
USP42Q9H9J4 MIR521-2-201ENST00000384818 87 ntBASIC-1.37□□□□□ -2.63
USP42Q9H9J4 MIR519A2-201ENST00000384990 87 ntBASIC-1.37□□□□□ -2.63
USP42Q9H9J4 MIR507-201ENST00000385234 94 ntBASIC-1.37□□□□□ -2.63
USP42Q9H9J4 RNU7-154P-201ENST00000516194 62 ntBASIC-1.37□□□□□ -2.63
USP42Q9H9J4 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.37□□□□□ -2.63
USP42Q9H9J4 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.38□□□□□ -2.63
USP42Q9H9J4 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.38□□□□□ -2.63
USP42Q9H9J4 MIR4503-201ENST00000582187 83 ntBASIC-1.38□□□□□ -2.63
USP42Q9H9J4 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.39□□□□□ -2.63
USP42Q9H9J4 RNU6-804P-201ENST00000384286 107 ntBASIC-1.39□□□□□ -2.63
USP42Q9H9J4 RNU6-540P-201ENST00000384622 101 ntBASIC-1.39□□□□□ -2.63
USP42Q9H9J4 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.39□□□□□ -2.63
USP42Q9H9J4 RNU6-518P-201ENST00000516056 96 ntBASIC-1.39□□□□□ -2.63
USP42Q9H9J4 AP002795.1-201ENST00000534879 84 ntBASIC-1.39□□□□□ -2.63
USP42Q9H9J4 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 RNU6-80P-201ENST00000384195 107 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 AL078595.1-201ENST00000404458 226 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 RNU6-772P-201ENST00000516042 105 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 SNORA63-201ENST00000363450 132 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 RNU6-704P-201ENST00000364162 103 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 MIR548H1-201ENST00000408610 102 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 SNORA19.1-201ENST00000410656 129 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 RNU6-795P-201ENST00000516323 103 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 MIR5009-201ENST00000578736 100 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 AC012531.4-201ENST00000616509 177 ntBASIC-1.4□□□□□ -2.63
USP42Q9H9J4 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.41□□□□□ -2.64
USP42Q9H9J4 RNU6-774P-201ENST00000363238 107 ntBASIC-1.41□□□□□ -2.64
USP42Q9H9J4 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.41□□□□□ -2.64
USP42Q9H9J4 RNU6-574P-201ENST00000384265 107 ntBASIC-1.41□□□□□ -2.64
USP42Q9H9J4 MIR3144-201ENST00000579460 79 ntBASIC-1.41□□□□□ -2.64
USP42Q9H9J4 AP001094.1-201ENST00000579805 193 ntBASIC-1.41□□□□□ -2.64
USP42Q9H9J4 U6.81-201ENST00000612550 106 ntBASIC-1.41□□□□□ -2.64
USP42Q9H9J4 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.42□□□□□ -2.64
USP42Q9H9J4 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.42□□□□□ -2.64
USP42Q9H9J4 RNU6-200P-201ENST00000364743 107 ntBASIC-1.42□□□□□ -2.64
USP42Q9H9J4 RNU7-88P-201ENST00000458752 63 ntBASIC-1.42□□□□□ -2.64
USP42Q9H9J4 RNU6-983P-201ENST00000516004 103 ntBASIC-1.42□□□□□ -2.64
USP42Q9H9J4 RNU6-732P-201ENST00000516033 103 ntBASIC-1.42□□□□□ -2.64
USP42Q9H9J4 RNU6-168P-201ENST00000516189 101 ntBASIC-1.42□□□□□ -2.64
USP42Q9H9J4 MIR6739-201ENST00000622461 75 ntBASIC-1.42□□□□□ -2.64
USP42Q9H9J4 AL157777.2-201ENST00000258070 137 ntBASIC-1.43□□□□□ -2.64
USP42Q9H9J4 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.43□□□□□ -2.64
USP42Q9H9J4 SNORD19-201ENST00000391191 68 ntBASIC-1.43□□□□□ -2.64
USP42Q9H9J4 AC090616.4-201ENST00000448026 115 ntBASIC-1.43□□□□□ -2.64
USP42Q9H9J4 RNU6-426P-201ENST00000516464 97 ntBASIC-1.43□□□□□ -2.64
USP42Q9H9J4 MIR4490-201ENST00000582647 84 ntBASIC-1.43□□□□□ -2.64
USP42Q9H9J4 SNORD18.1-201ENST00000363807 70 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms