Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 RNU2-38P-201ENST00000410856 79 ntBASIC-2.81□□□□□ -2.86
CHMP4BQ9H444 RNU7-154P-201ENST00000516194 62 ntBASIC-2.81□□□□□ -2.86
CHMP4BQ9H444 MIR548Q-201ENST00000408404 100 ntBASIC-2.82□□□□□ -2.86
CHMP4BQ9H444 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.82□□□□□ -2.86
CHMP4BQ9H444 Y_RNA.702-201ENST00000516843 96 ntBASIC-2.82□□□□□ -2.86
CHMP4BQ9H444 U7.5-201ENST00000517224 61 ntBASIC-2.82□□□□□ -2.86
CHMP4BQ9H444 MIR4773-1-201ENST00000637203 78 ntBASIC-2.82□□□□□ -2.86
CHMP4BQ9H444 RNU6-915P-201ENST00000364943 103 ntBASIC-2.83□□□□□ -2.86
CHMP4BQ9H444 MIR577-201ENST00000385196 96 ntBASIC-2.83□□□□□ -2.86
CHMP4BQ9H444 MIR3657-201ENST00000584818 117 ntBASIC-2.83□□□□□ -2.86
CHMP4BQ9H444 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.84□□□□□ -2.86
CHMP4BQ9H444 RNU6-62P-201ENST00000516526 102 ntBASIC-2.84□□□□□ -2.86
CHMP4BQ9H444 RNU6-563P-201ENST00000364872 108 ntBASIC-2.85□□□□□ -2.87
CHMP4BQ9H444 SNORD115-31-201ENST00000365318 82 ntBASIC-2.85□□□□□ -2.87
CHMP4BQ9H444 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.85□□□□□ -2.87
CHMP4BQ9H444 SNORD90-201ENST00000391145 111 ntBASIC-2.85□□□□□ -2.87
CHMP4BQ9H444 SNORD4B-201ENST00000459083 72 ntBASIC-2.85□□□□□ -2.87
CHMP4BQ9H444 MIR3171-201ENST00000584270 74 ntBASIC-2.85□□□□□ -2.87
CHMP4BQ9H444 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.86□□□□□ -2.87
CHMP4BQ9H444 RNA5SP292-201ENST00000390974 118 ntBASIC-2.86□□□□□ -2.87
CHMP4BQ9H444 MTATP6P29-201ENST00000415057 132 ntBASIC-2.86□□□□□ -2.87
CHMP4BQ9H444 MIR548Z-201ENST00000584743 97 ntBASIC-2.86□□□□□ -2.87
CHMP4BQ9H444 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.87□□□□□ -2.87
CHMP4BQ9H444 Y_RNA.138-201ENST00000363462 102 ntBASIC-2.87□□□□□ -2.87
CHMP4BQ9H444 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.87□□□□□ -2.87
CHMP4BQ9H444 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.87□□□□□ -2.87
CHMP4BQ9H444 RNU4-40P-201ENST00000364351 143 ntBASIC-2.88□□□□□ -2.87
CHMP4BQ9H444 MIR519A2-201ENST00000384990 87 ntBASIC-2.88□□□□□ -2.87
CHMP4BQ9H444 RNU6-460P-201ENST00000391158 108 ntBASIC-2.88□□□□□ -2.87
CHMP4BQ9H444 SNORD58.1-201ENST00000391313 66 ntBASIC-2.88□□□□□ -2.87
CHMP4BQ9H444 MIR4694-201ENST00000578534 80 ntBASIC-2.88□□□□□ -2.87
CHMP4BQ9H444 MIR548AG1-201ENST00000579932 66 ntBASIC-2.88□□□□□ -2.87
CHMP4BQ9H444 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.89□□□□□ -2.87
CHMP4BQ9H444 RNU6-644P-201ENST00000391155 98 ntBASIC-2.89□□□□□ -2.87
CHMP4BQ9H444 RNU6-824P-201ENST00000363724 104 ntBASIC-2.9□□□□□ -2.87
CHMP4BQ9H444 RNU6-151P-201ENST00000364158 107 ntBASIC-2.9□□□□□ -2.87
CHMP4BQ9H444 SNORA19.1-201ENST00000410656 129 ntBASIC-2.9□□□□□ -2.87
CHMP4BQ9H444 AL691482.2-201ENST00000457453 84 ntBASIC-2.9□□□□□ -2.87
CHMP4BQ9H444 MIR521-2-201ENST00000384818 87 ntBASIC-2.91□□□□□ -2.88
CHMP4BQ9H444 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.91□□□□□ -2.88
CHMP4BQ9H444 RNU6-258P-201ENST00000390884 101 ntBASIC-2.91□□□□□ -2.88
CHMP4BQ9H444 MIR548I1-201ENST00000408810 149 ntBASIC-2.91□□□□□ -2.88
CHMP4BQ9H444 MTATP8P1-201ENST00000467115 207 ntBASIC-2.91□□□□□ -2.88
CHMP4BQ9H444 RNU6-518P-201ENST00000516056 96 ntBASIC-2.91□□□□□ -2.88
CHMP4BQ9H444 RNU6-832P-201ENST00000363319 107 ntBASIC-2.92□□□□□ -2.88
CHMP4BQ9H444 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.92□□□□□ -2.88
CHMP4BQ9H444 RNU4-11P-201ENST00000365287 132 ntBASIC-2.92□□□□□ -2.88
CHMP4BQ9H444 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.92□□□□□ -2.88
CHMP4BQ9H444 SNORA33.2-201ENST00000365413 134 ntBASIC-2.92□□□□□ -2.88
CHMP4BQ9H444 RNU6-608P-201ENST00000383927 104 ntBASIC-2.92□□□□□ -2.88
CHMP4BQ9H444 RNU7-197P-201ENST00000458836 62 ntBASIC-2.92□□□□□ -2.88
CHMP4BQ9H444 RNU6-781P-201ENST00000516377 101 ntBASIC-2.92□□□□□ -2.88
CHMP4BQ9H444 SNORA18.5-201ENST00000516616 101 ntBASIC-2.92□□□□□ -2.88
CHMP4BQ9H444 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.93□□□□□ -2.88
CHMP4BQ9H444 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.93□□□□□ -2.88
CHMP4BQ9H444 RNU6-519P-201ENST00000410590 108 ntBASIC-2.93□□□□□ -2.88
CHMP4BQ9H444 RNU5F-1-201ENST00000362507 117 ntBASIC-2.94□□□□□ -2.88
CHMP4BQ9H444 AC020661.2-201ENST00000560114 134 ntBASIC-2.94□□□□□ -2.88
CHMP4BQ9H444 MIR4439-201ENST00000583746 80 ntBASIC-2.94□□□□□ -2.88
CHMP4BQ9H444 AC103810.7-201ENST00000607821 91 ntBASIC-2.94□□□□□ -2.88
CHMP4BQ9H444 RNU6-639P-201ENST00000384074 107 ntBASIC-2.95□□□□□ -2.88
CHMP4BQ9H444 RNU6-246P-201ENST00000384702 107 ntBASIC-2.95□□□□□ -2.88
CHMP4BQ9H444 MIR548W-201ENST00000581970 74 ntBASIC-2.95□□□□□ -2.88
CHMP4BQ9H444 Y_RNA.574-201ENST00000384766 95 ntBASIC-2.96□□□□□ -2.88
CHMP4BQ9H444 RNU4-71P-201ENST00000516258 113 ntBASIC-2.96□□□□□ -2.88
CHMP4BQ9H444 MIR4748-201ENST00000578076 82 ntBASIC-2.96□□□□□ -2.88
CHMP4BQ9H444 MIR466-201ENST00000580653 84 ntBASIC-2.96□□□□□ -2.88
CHMP4BQ9H444 RNU6-766P-201ENST00000362478 107 ntBASIC-2.97□□□□□ -2.88
CHMP4BQ9H444 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.97□□□□□ -2.88
CHMP4BQ9H444 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.97□□□□□ -2.88
CHMP4BQ9H444 RNY3P2-201ENST00000362918 102 ntBASIC-2.98□□□□□ -2.89
CHMP4BQ9H444 Y_RNA.509-201ENST00000384506 99 ntBASIC-2.98□□□□□ -2.89
CHMP4BQ9H444 MTND3P2-201ENST00000438452 342 ntBASIC-2.98□□□□□ -2.89
CHMP4BQ9H444 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.98□□□□□ -2.89
CHMP4BQ9H444 AC022559.1-201ENST00000520905 205 ntBASIC-2.98□□□□□ -2.89
CHMP4BQ9H444 RNU6-230P-201ENST00000362457 104 ntBASIC-2.99□□□□□ -2.89
CHMP4BQ9H444 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.99□□□□□ -2.89
CHMP4BQ9H444 Y_RNA.460-201ENST00000384255 102 ntBASIC-2.99□□□□□ -2.89
CHMP4BQ9H444 RNU6-813P-201ENST00000384691 107 ntBASIC-2.99□□□□□ -2.89
CHMP4BQ9H444 snoU13.10-201ENST00000459301 103 ntBASIC-2.99□□□□□ -2.89
CHMP4BQ9H444 AC120024.2-201ENST00000576526 175 ntBASIC-2.99□□□□□ -2.89
CHMP4BQ9H444 MIR3613-201ENST00000579844 87 ntBASIC-2.99□□□□□ -2.89
CHMP4BQ9H444 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.99□□□□□ -2.89
CHMP4BQ9H444 Y_RNA.309-201ENST00000365046 111 ntBASIC-3□□□□□ -2.89
CHMP4BQ9H444 MIR520D-201ENST00000385002 87 ntBASIC-3□□□□□ -2.89
CHMP4BQ9H444 AL021921.1-201ENST00000442774 93 ntBASIC-3.01□□□□□ -2.89
CHMP4BQ9H444 AL158147.1-201ENST00000443970 75 ntBASIC-3.01□□□□□ -2.89
CHMP4BQ9H444 SNORD45B-201ENST00000364617 72 ntBASIC-3.02□□□□□ -2.89
CHMP4BQ9H444 DLEU2_3.2-201ENST00000612883 73 ntBASIC-3.02□□□□□ -2.89
CHMP4BQ9H444 RNY4P7-201ENST00000364600 96 ntBASIC-3.03□□□□□ -2.89
CHMP4BQ9H444 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.03□□□□□ -2.89
CHMP4BQ9H444 MIR548S-201ENST00000581352 82 ntBASIC-3.03□□□□□ -2.89
CHMP4BQ9H444 MIR6739-201ENST00000622461 75 ntBASIC-3.03□□□□□ -2.89
CHMP4BQ9H444 Y_RNA.95-201ENST00000363079 95 ntBASIC-3.04□□□□□ -2.9
CHMP4BQ9H444 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.04□□□□□ -2.9
CHMP4BQ9H444 AC025166.1-201ENST00000612411 163 ntBASIC-3.04□□□□□ -2.9
CHMP4BQ9H444 U6.81-201ENST00000612550 106 ntBASIC-3.04□□□□□ -2.9
CHMP4BQ9H444 Y_RNA.204-201ENST00000364112 102 ntBASIC-3.05□□□□□ -2.9
CHMP4BQ9H444 Y_RNA.467-201ENST00000384297 102 ntBASIC-3.05□□□□□ -2.9
CHMP4BQ9H444 Y_RNA.630-201ENST00000411370 108 ntBASIC-3.05□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms