Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MIR222-201ENST00000384992 110 ntBASIC2.46□□□□□ -2.02
RNF39Q9H2S5 RNU1-29P-201ENST00000606574 126 ntBASIC2.46□□□□□ -2.02
RNF39Q9H2S5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.46□□□□□ -2.02
RNF39Q9H2S5 RNU1-78P-201ENST00000391248 165 ntBASIC2.45□□□□□ -2.02
RNF39Q9H2S5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.44□□□□□ -2.02
RNF39Q9H2S5 MIR6766-201ENST00000622641 72 ntBASIC2.44□□□□□ -2.02
RNF39Q9H2S5 SNORA64-201ENST00000384674 134 ntBASIC2.43□□□□□ -2.02
RNF39Q9H2S5 AC010297.1-201ENST00000623948 149 ntBASIC2.43□□□□□ -2.02
RNF39Q9H2S5 MIR18A-201ENST00000362310 71 ntBASIC2.42□□□□□ -2.02
RNF39Q9H2S5 MIR524-201ENST00000385242 87 ntBASIC2.42□□□□□ -2.02
RNF39Q9H2S5 RNU6-482P-201ENST00000391068 107 ntBASIC2.42□□□□□ -2.02
RNF39Q9H2S5 MIR1289-2-201ENST00000408360 111 ntBASIC2.42□□□□□ -2.02
RNF39Q9H2S5 MIR6873-201ENST00000622788 63 ntBASIC2.42□□□□□ -2.02
RNF39Q9H2S5 SNORD19-201ENST00000391191 68 ntBASIC2.41□□□□□ -2.02
RNF39Q9H2S5 MIR4422-201ENST00000581938 83 ntBASIC2.4□□□□□ -2.03
RNF39Q9H2S5 MIR764-201ENST00000390811 85 ntBASIC2.39□□□□□ -2.03
RNF39Q9H2S5 AC084368.1-201ENST00000620935 65 ntBASIC2.39□□□□□ -2.03
RNF39Q9H2S5 RNA5SP492-201ENST00000411330 114 ntBASIC2.38□□□□□ -2.03
RNF39Q9H2S5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF39Q9H2S5 RNU6-392P-201ENST00000364926 101 ntBASIC2.37□□□□□ -2.03
RNF39Q9H2S5 MIR548N-201ENST00000408742 75 ntBASIC2.37□□□□□ -2.03
RNF39Q9H2S5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RNF39Q9H2S5 SNORD114-1-201ENST00000362705 72 ntBASIC2.36□□□□□ -2.03
RNF39Q9H2S5 MIR3198-2-201ENST00000577868 80 ntBASIC2.36□□□□□ -2.03
RNF39Q9H2S5 Y_RNA.320-201ENST00000365144 102 ntBASIC2.35□□□□□ -2.03
RNF39Q9H2S5 RNU4-45P-201ENST00000365469 141 ntBASIC2.35□□□□□ -2.03
RNF39Q9H2S5 RNU6-1133P-201ENST00000410963 100 ntBASIC2.35□□□□□ -2.03
RNF39Q9H2S5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
RNF39Q9H2S5 RNA5SP200-201ENST00000516360 103 ntBASIC2.35□□□□□ -2.03
RNF39Q9H2S5 RN7SL660P-201ENST00000614852 299 ntBASIC2.35□□□□□ -2.03
RNF39Q9H2S5 Y_RNA.676-201ENST00000516393 96 ntBASIC2.34□□□□□ -2.03
RNF39Q9H2S5 AL391099.1-201ENST00000624635 187 ntBASIC2.34□□□□□ -2.03
RNF39Q9H2S5 MIR6073-201ENST00000352083 89 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 RNU6-1233P-201ENST00000362922 102 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 Y_RNA.129-201ENST00000363392 110 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 RNA5SP99-201ENST00000364020 114 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 RNA5SP181-201ENST00000410246 98 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 AL603825.1-201ENST00000438481 80 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 MIR3670-2-201ENST00000582974 65 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 MIR3670-1-201ENST00000584160 65 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 MIR3670-3-201ENST00000584855 65 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 MIR3670-4-201ENST00000612260 65 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 uc_338.36-201ENST00000622331 158 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 MIR219B-201ENST00000637023 88 ntBASIC2.33□□□□□ -2.04
RNF39Q9H2S5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
RNF39Q9H2S5 MIR4677-201ENST00000584153 80 ntBASIC2.32□□□□□ -2.04
RNF39Q9H2S5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
RNF39Q9H2S5 SNORA2A-201ENST00000383885 135 ntBASIC2.31□□□□□ -2.04
RNF39Q9H2S5 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.31□□□□□ -2.04
RNF39Q9H2S5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC2.31□□□□□ -2.04
RNF39Q9H2S5 AC069271.1-201ENST00000445577 156 ntBASIC2.31□□□□□ -2.04
RNF39Q9H2S5 RNU6-229P-201ENST00000516614 102 ntBASIC2.31□□□□□ -2.04
RNF39Q9H2S5 AL353997.5-201ENST00000618886 171 ntBASIC2.31□□□□□ -2.04
RNF39Q9H2S5 Y_RNA.260-201ENST00000364628 101 ntBASIC2.3□□□□□ -2.04
RNF39Q9H2S5 RNU6-68P-201ENST00000516576 104 ntBASIC2.3□□□□□ -2.04
RNF39Q9H2S5 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
RNF39Q9H2S5 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
RNF39Q9H2S5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
RNF39Q9H2S5 RNA5SP458-201ENST00000516188 119 ntBASIC2.29□□□□□ -2.04
RNF39Q9H2S5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
RNF39Q9H2S5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
RNF39Q9H2S5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RNF39Q9H2S5 RNU6-608P-201ENST00000383927 104 ntBASIC2.27□□□□□ -2.05
RNF39Q9H2S5 SNORA48.3-201ENST00000391081 134 ntBASIC2.27□□□□□ -2.05
RNF39Q9H2S5 Y_RNA.783-201ENST00000613546 102 ntBASIC2.27□□□□□ -2.05
RNF39Q9H2S5 RNA5SP224-201ENST00000365069 126 ntBASIC2.26□□□□□ -2.05
RNF39Q9H2S5 AC011195.1-201ENST00000578177 177 ntBASIC2.26□□□□□ -2.05
RNF39Q9H2S5 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
RNF39Q9H2S5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RNF39Q9H2S5 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RNF39Q9H2S5 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC2.24□□□□□ -2.05
RNF39Q9H2S5 RNU4-54P-201ENST00000516428 129 ntBASIC2.23□□□□□ -2.05
RNF39Q9H2S5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RNF39Q9H2S5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.22□□□□□ -2.05
RNF39Q9H2S5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RNF39Q9H2S5 RNU6-973P-201ENST00000364690 107 ntBASIC2.22□□□□□ -2.05
RNF39Q9H2S5 RNA5SP247-201ENST00000411181 105 ntBASIC2.22□□□□□ -2.05
RNF39Q9H2S5 AC104435.1-201ENST00000483483 166 ntBASIC2.22□□□□□ -2.05
RNF39Q9H2S5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
RNF39Q9H2S5 Y_RNA.335-201ENST00000365299 96 ntBASIC2.21□□□□□ -2.06
RNF39Q9H2S5 MIR106A-201ENST00000384870 81 ntBASIC2.21□□□□□ -2.06
RNF39Q9H2S5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RNF39Q9H2S5 FO624990.1-201ENST00000636373 85 ntBASIC2.21□□□□□ -2.06
RNF39Q9H2S5 MIR518A1-201ENST00000385068 85 ntBASIC2.2□□□□□ -2.06
RNF39Q9H2S5 MIR501-201ENST00000390204 84 ntBASIC2.2□□□□□ -2.06
RNF39Q9H2S5 MIR1197-201ENST00000408818 88 ntBASIC2.2□□□□□ -2.06
RNF39Q9H2S5 RNU6-1232P-201ENST00000516299 86 ntBASIC2.2□□□□□ -2.06
RNF39Q9H2S5 MIR6755-201ENST00000619993 66 ntBASIC2.2□□□□□ -2.06
RNF39Q9H2S5 Z82195.2-201ENST00000612348 18351 ntBASIC2.2□□□□□ -2.06
RNF39Q9H2S5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RNF39Q9H2S5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RNF39Q9H2S5 Y_RNA.338-201ENST00000365320 114 ntBASIC2.19□□□□□ -2.06
RNF39Q9H2S5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.19□□□□□ -2.06
RNF39Q9H2S5 AP002795.1-201ENST00000534879 84 ntBASIC2.18□□□□□ -2.06
RNF39Q9H2S5 MIR4446-201ENST00000578505 67 ntBASIC2.18□□□□□ -2.06
RNF39Q9H2S5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RNF39Q9H2S5 MIR200A-201ENST00000384875 90 ntBASIC2.17□□□□□ -2.06
RNF39Q9H2S5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RNF39Q9H2S5 RNU7-55P-201ENST00000459426 62 ntBASIC2.17□□□□□ -2.06
RNF39Q9H2S5 MIR4303-201ENST00000581299 66 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms