Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RNU6-1191P-201ENST00000516799 107 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-295P-201ENST00000516901 104 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 AP002795.1-201ENST00000534879 84 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR3126-201ENST00000577443 74 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR4804-201ENST00000581683 73 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR4499-201ENST00000584834 69 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 AL157834.3-201ENST00000615543 103 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 AL353997.5-201ENST00000618886 171 ntBASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
KRTAP4-3Q9BYR4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU1-105P-201ENST00000363470 161 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-112P-201ENST00000363599 104 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 RNA5SP325-201ENST00000363756 130 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORD113.3-201ENST00000364630 78 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.374-201ENST00000365606 101 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-1324P-201ENST00000384222 107 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR597-201ENST00000384968 97 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR627-201ENST00000384979 97 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR644A-201ENST00000385262 94 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU1-119P-201ENST00000391122 165 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORA26.9-201ENST00000391322 122 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU7-56P-201ENST00000458744 62 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORD13-201ENST00000459299 104 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 SNORD108-201ENST00000459332 71 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 snoU13.18-201ENST00000459483 104 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 AL133373.1-201ENST00000497098 94 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 RNU6-983P-201ENST00000516004 103 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 RNVU1-2-201ENST00000516326 135 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 RNA5SP134-201ENST00000516492 96 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.684-201ENST00000516510 99 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR4781-201ENST00000585250 76 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 MIR6132-201ENST00000622083 109 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 AP000553.5-201ENST00000641933 54 ntBASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
KRTAP4-3Q9BYR4 Y_RNA.178-201ENST00000363832 102 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 RNY4P7-201ENST00000364600 96 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6-563P-201ENST00000364872 108 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.397-201ENST00000383950 98 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6-1036P-201ENST00000383959 104 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP252-201ENST00000391131 119 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORD110-201ENST00000408189 75 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP38-201ENST00000410750 119 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 AC108667.1-201ENST00000428618 249 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 AC036111.3-201ENST00000526389 112 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR4303-201ENST00000581299 66 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 AC074140.1-201ENST00000621617 208 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.65□□□□□ -2.31
KRTAP4-3Q9BYR4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORD18A-201ENST00000363753 72 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.228-201ENST00000364346 98 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORD114-29-201ENST00000364819 70 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORA62.4-201ENST00000365504 151 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 U8.9-201ENST00000365667 134 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR583-201ENST00000384846 75 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR194-1-201ENST00000384892 85 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR499A-201ENST00000384903 122 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 AC004965.1-201ENST00000413033 213 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 AC104332.2-201ENST00000429959 156 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 IFNWP4-201ENST00000453148 294 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 U7.7-201ENST00000459276 60 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 SNORD124-201ENST00000459577 104 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 AC023141.11-201ENST00000508864 202 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6-1053P-201ENST00000515930 101 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR3690-201ENST00000580266 75 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 GHRLOS.1-201ENST00000610995 70 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR5683-201ENST00000636514 76 ntBASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC0.64□□□□□ -2.31
KRTAP4-3Q9BYR4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.266-201ENST00000364678 96 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.349-201ENST00000365406 102 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP259-201ENST00000365541 109 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR496-201ENST00000385226 102 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP100-201ENST00000410903 110 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP59-201ENST00000410922 110 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 HMGN2P22-201ENST00000427588 175 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 RNY4P25-201ENST00000459254 96 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 AC087343.1-201ENST00000477341 475 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 Y_RNA.658-201ENST00000515990 97 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6-469P-201ENST00000516253 101 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 RNA5SP61-201ENST00000516453 100 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 RNU6-175P-201ENST00000516896 107 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR4498-201ENST00000577599 66 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 AC026271.5-201ENST00000577873 130 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR548W-201ENST00000581970 74 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.63□□□□□ -2.31
KRTAP4-3Q9BYR4 MIR6755-201ENST00000619993 66 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 250.5 ms