Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SNORA16.1-201ENST00000364597 132 ntBASIC1.6□□□□□ -2.15
COL25A1Q9BXS0 AL021921.1-201ENST00000442774 93 ntBASIC1.6□□□□□ -2.15
COL25A1Q9BXS0 AL162376.1-201ENST00000624117 175 ntBASIC1.6□□□□□ -2.15
COL25A1Q9BXS0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.6□□□□□ -2.15
COL25A1Q9BXS0 Y_RNA.282-201ENST00000364793 102 ntBASIC1.59□□□□□ -2.15
COL25A1Q9BXS0 RNA5SP160-201ENST00000364866 120 ntBASIC1.59□□□□□ -2.15
COL25A1Q9BXS0 AC008834.1-201ENST00000511612 175 ntBASIC1.59□□□□□ -2.15
COL25A1Q9BXS0 MIR548AE1-201ENST00000583292 70 ntBASIC1.59□□□□□ -2.15
COL25A1Q9BXS0 AC012493.3-201ENST00000604494 112 ntBASIC1.59□□□□□ -2.15
COL25A1Q9BXS0 SNORD12-201ENST00000391002 90 ntBASIC1.58□□□□□ -2.16
COL25A1Q9BXS0 RNA5SP489-201ENST00000410986 109 ntBASIC1.58□□□□□ -2.16
COL25A1Q9BXS0 SCARNA16.5-201ENST00000517114 183 ntBASIC1.58□□□□□ -2.16
COL25A1Q9BXS0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.58□□□□□ -2.16
COL25A1Q9BXS0 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
COL25A1Q9BXS0 RNU6-810P-201ENST00000364001 107 ntBASIC1.57□□□□□ -2.16
COL25A1Q9BXS0 MIR222-201ENST00000384992 110 ntBASIC1.57□□□□□ -2.16
COL25A1Q9BXS0 RNA5SP338-201ENST00000410495 85 ntBASIC1.57□□□□□ -2.16
COL25A1Q9BXS0 RNU6-518P-201ENST00000516056 96 ntBASIC1.57□□□□□ -2.16
COL25A1Q9BXS0 SNORA70.22-201ENST00000517160 124 ntBASIC1.57□□□□□ -2.16
COL25A1Q9BXS0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
COL25A1Q9BXS0 MIR3678-201ENST00000578455 94 ntBASIC1.57□□□□□ -2.16
COL25A1Q9BXS0 AC090617.8-201ENST00000623339 167 ntBASIC1.57□□□□□ -2.16
COL25A1Q9BXS0 MIR924-201ENST00000638017 53 ntBASIC1.57□□□□□ -2.16
COL25A1Q9BXS0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL25A1Q9BXS0 U7.7-201ENST00000459276 60 ntBASIC1.56□□□□□ -2.16
COL25A1Q9BXS0 MIR3122-201ENST00000577243 73 ntBASIC1.56□□□□□ -2.16
COL25A1Q9BXS0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.56□□□□□ -2.16
COL25A1Q9BXS0 MIR527-201ENST00000385244 85 ntBASIC1.55□□□□□ -2.16
COL25A1Q9BXS0 AC002429.1-201ENST00000437672 148 ntBASIC1.55□□□□□ -2.16
COL25A1Q9BXS0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.55□□□□□ -2.16
COL25A1Q9BXS0 U6.96-201ENST00000636425 70 ntBASIC1.55□□□□□ -2.16
COL25A1Q9BXS0 MIR516B1-201ENST00000385211 90 ntBASIC1.54□□□□□ -2.16
COL25A1Q9BXS0 SNORD105-201ENST00000386910 85 ntBASIC1.54□□□□□ -2.16
COL25A1Q9BXS0 MIR4419B-201ENST00000577260 68 ntBASIC1.54□□□□□ -2.16
COL25A1Q9BXS0 MIR6828-201ENST00000636181 60 ntBASIC1.54□□□□□ -2.16
COL25A1Q9BXS0 SNORD1B-201ENST00000363091 84 ntBASIC1.53□□□□□ -2.16
COL25A1Q9BXS0 MIR519A2-201ENST00000384990 87 ntBASIC1.53□□□□□ -2.16
COL25A1Q9BXS0 RNU6-246P-201ENST00000384702 107 ntBASIC1.52□□□□□ -2.17
COL25A1Q9BXS0 SNORD89-201ENST00000390981 114 ntBASIC1.52□□□□□ -2.17
COL25A1Q9BXS0 RNU6-172P-201ENST00000411000 93 ntBASIC1.52□□□□□ -2.17
COL25A1Q9BXS0 RNU6-419P-201ENST00000517030 63 ntBASIC1.52□□□□□ -2.17
COL25A1Q9BXS0 MIR4490-201ENST00000582647 84 ntBASIC1.52□□□□□ -2.17
COL25A1Q9BXS0 MIR4473-201ENST00000583731 91 ntBASIC1.52□□□□□ -2.17
COL25A1Q9BXS0 AC243829.3-201ENST00000622177 108 ntBASIC1.52□□□□□ -2.17
COL25A1Q9BXS0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL25A1Q9BXS0 VTRNA1-3-201ENST00000365645 89 ntBASIC1.51□□□□□ -2.17
COL25A1Q9BXS0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL25A1Q9BXS0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
COL25A1Q9BXS0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.5□□□□□ -2.17
COL25A1Q9BXS0 RNU6-247P-201ENST00000362636 107 ntBASIC1.5□□□□□ -2.17
COL25A1Q9BXS0 MIR1255B2-201ENST00000408618 67 ntBASIC1.5□□□□□ -2.17
COL25A1Q9BXS0 MIR548AG1-201ENST00000579932 66 ntBASIC1.5□□□□□ -2.17
COL25A1Q9BXS0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.5□□□□□ -2.17
COL25A1Q9BXS0 AC243829.6-201ENST00000612652 106 ntBASIC1.5□□□□□ -2.17
COL25A1Q9BXS0 MIR573-201ENST00000384964 99 ntBASIC1.49□□□□□ -2.17
COL25A1Q9BXS0 RNU6-1250P-201ENST00000391218 107 ntBASIC1.49□□□□□ -2.17
COL25A1Q9BXS0 AC006210.1-201ENST00000424882 111 ntBASIC1.49□□□□□ -2.17
COL25A1Q9BXS0 MIR3612-201ENST00000579753 87 ntBASIC1.49□□□□□ -2.17
COL25A1Q9BXS0 SNORD110-201ENST00000408189 75 ntBASIC1.48□□□□□ -2.17
COL25A1Q9BXS0 Y_RNA.109-201ENST00000363215 102 ntBASIC1.46□□□□□ -2.18
COL25A1Q9BXS0 RNA5SP227-201ENST00000516184 113 ntBASIC1.46□□□□□ -2.18
COL25A1Q9BXS0 RNU6-924P-201ENST00000362926 108 ntBASIC1.45□□□□□ -2.18
COL25A1Q9BXS0 FABP5P4-201ENST00000437203 171 ntBASIC1.45□□□□□ -2.18
COL25A1Q9BXS0 SNORA36.1-201ENST00000363424 132 ntBASIC1.44□□□□□ -2.18
COL25A1Q9BXS0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.44□□□□□ -2.18
COL25A1Q9BXS0 MIR8087-201ENST00000612745 78 ntBASIC1.44□□□□□ -2.18
COL25A1Q9BXS0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL25A1Q9BXS0 RNU7-154P-201ENST00000516194 62 ntBASIC1.43□□□□□ -2.18
COL25A1Q9BXS0 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
COL25A1Q9BXS0 RNU6-337P-201ENST00000391243 106 ntBASIC1.42□□□□□ -2.18
COL25A1Q9BXS0 AC244090.1-201ENST00000441884 93 ntBASIC1.42□□□□□ -2.18
COL25A1Q9BXS0 SNORD115-25-201ENST00000362619 82 ntBASIC1.41□□□□□ -2.18
COL25A1Q9BXS0 RNU6-986P-201ENST00000363133 102 ntBASIC1.41□□□□□ -2.18
COL25A1Q9BXS0 RNU6-724P-201ENST00000390958 105 ntBASIC1.41□□□□□ -2.18
COL25A1Q9BXS0 AC025627.3-201ENST00000582078 182 ntBASIC1.41□□□□□ -2.18
COL25A1Q9BXS0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
COL25A1Q9BXS0 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.4□□□□□ -2.19
COL25A1Q9BXS0 RNA5SP268-201ENST00000516828 124 ntBASIC1.4□□□□□ -2.19
COL25A1Q9BXS0 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
COL25A1Q9BXS0 SNORA70.25-201ENST00000612741 95 ntBASIC1.4□□□□□ -2.19
COL25A1Q9BXS0 MIR429-201ENST00000362106 83 ntBASIC1.39□□□□□ -2.19
COL25A1Q9BXS0 MIR20A-201ENST00000362279 71 ntBASIC1.39□□□□□ -2.19
COL25A1Q9BXS0 RNU6-458P-201ENST00000384179 107 ntBASIC1.39□□□□□ -2.19
COL25A1Q9BXS0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
COL25A1Q9BXS0 MIR1304-201ENST00000408243 91 ntBASIC1.39□□□□□ -2.19
COL25A1Q9BXS0 MIR7107-201ENST00000611489 80 ntBASIC1.39□□□□□ -2.19
COL25A1Q9BXS0 U6.58-201ENST00000613107 107 ntBASIC1.39□□□□□ -2.19
COL25A1Q9BXS0 AC010487.4-201ENST00000637027 61 ntBASIC1.39□□□□□ -2.19
COL25A1Q9BXS0 RNA5SP327-201ENST00000362494 101 ntBASIC1.38□□□□□ -2.19
COL25A1Q9BXS0 RNU6-997P-201ENST00000384725 107 ntBASIC1.38□□□□□ -2.19
COL25A1Q9BXS0 HMGN2P22-201ENST00000427588 175 ntBASIC1.38□□□□□ -2.19
COL25A1Q9BXS0 RNU6-1206P-201ENST00000516339 103 ntBASIC1.38□□□□□ -2.19
COL25A1Q9BXS0 RNU7-160P-201ENST00000516660 62 ntBASIC1.38□□□□□ -2.19
COL25A1Q9BXS0 MIR18A-201ENST00000362310 71 ntBASIC1.37□□□□□ -2.19
COL25A1Q9BXS0 SNORD114-23-201ENST00000363536 72 ntBASIC1.37□□□□□ -2.19
COL25A1Q9BXS0 MIR19B1-201ENST00000384829 87 ntBASIC1.37□□□□□ -2.19
COL25A1Q9BXS0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
COL25A1Q9BXS0 MIR548AL-201ENST00000578416 97 ntBASIC1.37□□□□□ -2.19
COL25A1Q9BXS0 MIR6773-201ENST00000612812 74 ntBASIC1.37□□□□□ -2.19
COL25A1Q9BXS0 MIR373-201ENST00000362273 69 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 243.3 ms