Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.01□□□□□ -2.25
SALL3Q9BXA9 uc_338.10-201ENST00000621872 182 ntBASIC1.01□□□□□ -2.25
SALL3Q9BXA9 MIR6739-201ENST00000622461 75 ntBASIC1.01□□□□□ -2.25
SALL3Q9BXA9 AC090617.8-201ENST00000623339 167 ntBASIC1.01□□□□□ -2.25
SALL3Q9BXA9 SNORD114-24-201ENST00000365029 72 ntBASIC1□□□□□ -2.25
SALL3Q9BXA9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.99□□□□□ -2.25
SALL3Q9BXA9 RNA5SP257-201ENST00000363023 116 ntBASIC0.99□□□□□ -2.25
SALL3Q9BXA9 RNA5SP403-201ENST00000363598 108 ntBASIC0.99□□□□□ -2.25
SALL3Q9BXA9 SNORD114-2-201ENST00000363953 78 ntBASIC0.99□□□□□ -2.25
SALL3Q9BXA9 MIR519E-201ENST00000385075 84 ntBASIC0.99□□□□□ -2.25
SALL3Q9BXA9 SNORD89-201ENST00000390981 114 ntBASIC0.99□□□□□ -2.25
SALL3Q9BXA9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.99□□□□□ -2.25
SALL3Q9BXA9 RNU6-231P-201ENST00000517122 103 ntBASIC0.99□□□□□ -2.25
SALL3Q9BXA9 MIR4661-201ENST00000582720 75 ntBASIC0.99□□□□□ -2.25
SALL3Q9BXA9 RNA5SP215-201ENST00000363440 122 ntBASIC0.98□□□□□ -2.25
SALL3Q9BXA9 MIR582-201ENST00000365731 98 ntBASIC0.98□□□□□ -2.25
SALL3Q9BXA9 RNU6V-201ENST00000384105 107 ntBASIC0.98□□□□□ -2.25
SALL3Q9BXA9 U3.27-201ENST00000391237 200 ntBASIC0.98□□□□□ -2.25
SALL3Q9BXA9 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.98□□□□□ -2.25
SALL3Q9BXA9 MIR4490-201ENST00000582647 84 ntBASIC0.98□□□□□ -2.25
SALL3Q9BXA9 Y_RNA.633-201ENST00000459107 95 ntBASIC0.97□□□□□ -2.25
SALL3Q9BXA9 MIR548X-201ENST00000580069 75 ntBASIC0.97□□□□□ -2.25
SALL3Q9BXA9 AC138207.3-201ENST00000585289 166 ntBASIC0.97□□□□□ -2.25
SALL3Q9BXA9 SNORA2.1-201ENST00000363089 137 ntBASIC0.96□□□□□ -2.26
SALL3Q9BXA9 RNU6-838P-201ENST00000363399 108 ntBASIC0.96□□□□□ -2.26
SALL3Q9BXA9 SNORD115-24-201ENST00000363528 82 ntBASIC0.96□□□□□ -2.26
SALL3Q9BXA9 SNORA33.1-201ENST00000364957 130 ntBASIC0.96□□□□□ -2.26
SALL3Q9BXA9 RNU6-520P-201ENST00000384717 104 ntBASIC0.96□□□□□ -2.26
SALL3Q9BXA9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.96□□□□□ -2.26
SALL3Q9BXA9 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
SALL3Q9BXA9 AC018659.1-201ENST00000551083 169 ntBASIC0.96□□□□□ -2.26
SALL3Q9BXA9 RNA5SP62-201ENST00000363457 110 ntBASIC0.95□□□□□ -2.26
SALL3Q9BXA9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.95□□□□□ -2.26
SALL3Q9BXA9 RNA5SP255-201ENST00000516370 107 ntBASIC0.95□□□□□ -2.26
SALL3Q9BXA9 RNA5SP121-201ENST00000516537 101 ntBASIC0.95□□□□□ -2.26
SALL3Q9BXA9 MIR4639-201ENST00000584938 69 ntBASIC0.95□□□□□ -2.26
SALL3Q9BXA9 SNORA9.1-201ENST00000362412 131 ntBASIC0.94□□□□□ -2.26
SALL3Q9BXA9 RNU6-698P-201ENST00000363523 107 ntBASIC0.94□□□□□ -2.26
SALL3Q9BXA9 RNU6-34P-201ENST00000364874 107 ntBASIC0.94□□□□□ -2.26
SALL3Q9BXA9 RNU7-13P-201ENST00000516413 62 ntBASIC0.94□□□□□ -2.26
SALL3Q9BXA9 MIR6513-201ENST00000621188 64 ntBASIC0.94□□□□□ -2.26
SALL3Q9BXA9 RNU6-810P-201ENST00000364001 107 ntBASIC0.93□□□□□ -2.26
SALL3Q9BXA9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SALL3Q9BXA9 MIR573-201ENST00000384964 99 ntBASIC0.93□□□□□ -2.26
SALL3Q9BXA9 MIR216B-201ENST00000390186 82 ntBASIC0.93□□□□□ -2.26
SALL3Q9BXA9 RNU6-269P-201ENST00000391077 97 ntBASIC0.93□□□□□ -2.26
SALL3Q9BXA9 ACA64.5-201ENST00000516207 127 ntBASIC0.93□□□□□ -2.26
SALL3Q9BXA9 RNA5SP330-201ENST00000517096 96 ntBASIC0.93□□□□□ -2.26
SALL3Q9BXA9 SNORD1B-201ENST00000363091 84 ntBASIC0.92□□□□□ -2.26
SALL3Q9BXA9 SNORD28-201ENST00000384706 75 ntBASIC0.92□□□□□ -2.26
SALL3Q9BXA9 MIR521-2-201ENST00000384818 87 ntBASIC0.92□□□□□ -2.26
SALL3Q9BXA9 SNORD116.2-201ENST00000391251 93 ntBASIC0.92□□□□□ -2.26
SALL3Q9BXA9 RNU6-469P-201ENST00000516253 101 ntBASIC0.92□□□□□ -2.26
SALL3Q9BXA9 MIR8087-201ENST00000612745 78 ntBASIC0.92□□□□□ -2.26
SALL3Q9BXA9 AC067863.3-201ENST00000624172 122 ntBASIC0.92□□□□□ -2.26
SALL3Q9BXA9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.91□□□□□ -2.26
SALL3Q9BXA9 Y_RNA.282-201ENST00000364793 102 ntBASIC0.91□□□□□ -2.26
SALL3Q9BXA9 RNU4-45P-201ENST00000365469 141 ntBASIC0.91□□□□□ -2.26
SALL3Q9BXA9 RNU6-1008P-201ENST00000384160 104 ntBASIC0.91□□□□□ -2.26
SALL3Q9BXA9 MIR617-201ENST00000385030 97 ntBASIC0.91□□□□□ -2.26
SALL3Q9BXA9 MIR517B-201ENST00000385102 67 ntBASIC0.91□□□□□ -2.26
SALL3Q9BXA9 MIR548H4-201ENST00000408689 111 ntBASIC0.91□□□□□ -2.26
SALL3Q9BXA9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.91□□□□□ -2.26
SALL3Q9BXA9 MIR548AE1-201ENST00000583292 70 ntBASIC0.91□□□□□ -2.26
SALL3Q9BXA9 MIR548C-201ENST00000384815 97 ntBASIC0.9□□□□□ -2.26
SALL3Q9BXA9 MIR644A-201ENST00000385262 94 ntBASIC0.9□□□□□ -2.26
SALL3Q9BXA9 SNORA40B-201ENST00000385573 128 ntBASIC0.9□□□□□ -2.26
SALL3Q9BXA9 MT-TY-201ENST00000387409 66 ntBASIC0.9□□□□□ -2.26
SALL3Q9BXA9 SNORD41.1-201ENST00000391000 69 ntBASIC0.9□□□□□ -2.26
SALL3Q9BXA9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.9□□□□□ -2.26
SALL3Q9BXA9 MIR3678-201ENST00000578455 94 ntBASIC0.9□□□□□ -2.26
SALL3Q9BXA9 MIR3612-201ENST00000579753 87 ntBASIC0.9□□□□□ -2.26
SALL3Q9BXA9 SNORD116-16-201ENST00000384533 92 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 MIR548E-201ENST00000408287 88 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 RNU7-74P-201ENST00000459104 62 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 RNU7-104P-201ENST00000459398 79 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 RNA5SP476-201ENST00000516613 103 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 RNA5SP47-201ENST00000517230 109 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 AC244669.1-204ENST00000621564 178 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.89□□□□□ -2.27
SALL3Q9BXA9 MIR330-201ENST00000362196 94 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 SNORD18A-201ENST00000363753 72 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 Y_RNA.246-201ENST00000364495 108 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 RNU6-302P-201ENST00000365249 107 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 RNU6-716P-201ENST00000365621 103 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 RNU6-974P-201ENST00000384099 108 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 HAR1A.1-201ENST00000459583 118 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 RNA5SP94-201ENST00000516917 108 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 RNU6-419P-201ENST00000517030 63 ntBASIC0.89□□□□□ -2.27
SALL3Q9BXA9 MIR936-201ENST00000401264 98 ntBASIC0.88□□□□□ -2.27
SALL3Q9BXA9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.88□□□□□ -2.27
SALL3Q9BXA9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.88□□□□□ -2.27
SALL3Q9BXA9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
SALL3Q9BXA9 Y_RNA.109-201ENST00000363215 102 ntBASIC0.87□□□□□ -2.27
SALL3Q9BXA9 MIR519A2-201ENST00000384990 87 ntBASIC0.87□□□□□ -2.27
SALL3Q9BXA9 MIR652-201ENST00000385278 98 ntBASIC0.87□□□□□ -2.27
SALL3Q9BXA9 RNU6-172P-201ENST00000411000 93 ntBASIC0.87□□□□□ -2.27
SALL3Q9BXA9 MIR4714-201ENST00000580728 77 ntBASIC0.87□□□□□ -2.27
SALL3Q9BXA9 MIR6828-201ENST00000636181 60 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms