Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MIR548I1-201ENST00000408810 149 ntBASIC-1.6□□□□□ -2.67
RPRD1AQ96P16 RNA5SP147-201ENST00000516493 109 ntBASIC-1.6□□□□□ -2.67
RPRD1AQ96P16 RNU6-706P-201ENST00000517229 104 ntBASIC-1.6□□□□□ -2.67
RPRD1AQ96P16 MIR6888-201ENST00000621977 67 ntBASIC-1.6□□□□□ -2.67
RPRD1AQ96P16 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.61□□□□□ -2.67
RPRD1AQ96P16 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.61□□□□□ -2.67
RPRD1AQ96P16 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.61□□□□□ -2.67
RPRD1AQ96P16 RNU6-182P-201ENST00000516970 105 ntBASIC-1.61□□□□□ -2.67
RPRD1AQ96P16 AC012531.4-201ENST00000616509 177 ntBASIC-1.61□□□□□ -2.67
RPRD1AQ96P16 MIR4773-1-201ENST00000637203 78 ntBASIC-1.61□□□□□ -2.67
RPRD1AQ96P16 RNU6-824P-201ENST00000363724 104 ntBASIC-1.62□□□□□ -2.67
RPRD1AQ96P16 SNORA33.1-201ENST00000364957 130 ntBASIC-1.62□□□□□ -2.67
RPRD1AQ96P16 RNU6-257P-201ENST00000410238 98 ntBASIC-1.62□□□□□ -2.67
RPRD1AQ96P16 AL445584.3-201ENST00000617173 78 ntBASIC-1.62□□□□□ -2.67
RPRD1AQ96P16 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.63□□□□□ -2.67
RPRD1AQ96P16 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.63□□□□□ -2.67
RPRD1AQ96P16 RNU6-886P-201ENST00000384319 105 ntBASIC-1.63□□□□□ -2.67
RPRD1AQ96P16 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.63□□□□□ -2.67
RPRD1AQ96P16 MIR203A-201ENST00000384836 110 ntBASIC-1.63□□□□□ -2.67
RPRD1AQ96P16 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.63□□□□□ -2.67
RPRD1AQ96P16 MIR3914-2-201ENST00000637339 95 ntBASIC-1.63□□□□□ -2.67
RPRD1AQ96P16 RNU5F-1-201ENST00000362507 117 ntBASIC-1.64□□□□□ -2.67
RPRD1AQ96P16 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.64□□□□□ -2.67
RPRD1AQ96P16 RNU7-134P-201ENST00000458997 64 ntBASIC-1.64□□□□□ -2.67
RPRD1AQ96P16 SNORD33.1-201ENST00000516213 88 ntBASIC-1.64□□□□□ -2.67
RPRD1AQ96P16 MIR6509-201ENST00000614603 85 ntBASIC-1.64□□□□□ -2.67
RPRD1AQ96P16 SNORA2.1-201ENST00000363089 137 ntBASIC-1.65□□□□□ -2.67
RPRD1AQ96P16 MIR1255B2-201ENST00000408618 67 ntBASIC-1.65□□□□□ -2.67
RPRD1AQ96P16 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.66□□□□□ -2.68
RPRD1AQ96P16 MIR3657-201ENST00000584818 117 ntBASIC-1.66□□□□□ -2.68
RPRD1AQ96P16 MIR198-201ENST00000637333 62 ntBASIC-1.66□□□□□ -2.68
RPRD1AQ96P16 RNU7-200P-201ENST00000516105 62 ntBASIC-1.67□□□□□ -2.68
RPRD1AQ96P16 RNA5SP461-201ENST00000516451 104 ntBASIC-1.67□□□□□ -2.68
RPRD1AQ96P16 MIR8485-201ENST00000401372 91 ntBASIC-1.68□□□□□ -2.68
RPRD1AQ96P16 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.68□□□□□ -2.68
RPRD1AQ96P16 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.68□□□□□ -2.68
RPRD1AQ96P16 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.68□□□□□ -2.68
RPRD1AQ96P16 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.69□□□□□ -2.68
RPRD1AQ96P16 SNORD58A-201ENST00000383875 65 ntBASIC-1.69□□□□□ -2.68
RPRD1AQ96P16 RNU6-479P-201ENST00000516348 105 ntBASIC-1.69□□□□□ -2.68
RPRD1AQ96P16 RNU6-971P-201ENST00000516920 106 ntBASIC-1.69□□□□□ -2.68
RPRD1AQ96P16 AC026421.1-201ENST00000519101 163 ntBASIC-1.69□□□□□ -2.68
RPRD1AQ96P16 CYP3A54P-201ENST00000566950 75 ntBASIC-1.69□□□□□ -2.68
RPRD1AQ96P16 MIR548A3-201ENST00000385297 97 ntBASIC-1.7□□□□□ -2.68
RPRD1AQ96P16 HLA-S-202ENST00000425174 53 ntBASIC-1.7□□□□□ -2.68
RPRD1AQ96P16 AL691482.2-201ENST00000457453 84 ntBASIC-1.7□□□□□ -2.68
RPRD1AQ96P16 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.71□□□□□ -2.68
RPRD1AQ96P16 RNU6-972P-201ENST00000391208 107 ntBASIC-1.71□□□□□ -2.68
RPRD1AQ96P16 U6.81-201ENST00000612550 106 ntBASIC-1.71□□□□□ -2.68
RPRD1AQ96P16 AC132825.6-201ENST00000638861 357 ntBASIC-1.71□□□□□ -2.68
RPRD1AQ96P16 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.72□□□□□ -2.68
RPRD1AQ96P16 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.72□□□□□ -2.68
RPRD1AQ96P16 MIR1468-201ENST00000410600 86 ntBASIC-1.72□□□□□ -2.68
RPRD1AQ96P16 RNU6-887P-201ENST00000410660 100 ntBASIC-1.72□□□□□ -2.68
RPRD1AQ96P16 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.72□□□□□ -2.68
RPRD1AQ96P16 AC138207.3-201ENST00000585289 166 ntBASIC-1.72□□□□□ -2.68
RPRD1AQ96P16 U6.95-201ENST00000636931 70 ntBASIC-1.72□□□□□ -2.68
RPRD1AQ96P16 SNORA19.1-201ENST00000410656 129 ntBASIC-1.73□□□□□ -2.69
RPRD1AQ96P16 SCARNA23-201ENST00000516060 130 ntBASIC-1.73□□□□□ -2.69
RPRD1AQ96P16 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.73□□□□□ -2.69
RPRD1AQ96P16 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.73□□□□□ -2.69
RPRD1AQ96P16 RNU6-924P-201ENST00000362926 108 ntBASIC-1.74□□□□□ -2.69
RPRD1AQ96P16 RNU6-226P-201ENST00000363778 107 ntBASIC-1.74□□□□□ -2.69
RPRD1AQ96P16 RNU6-746P-201ENST00000384112 109 ntBASIC-1.74□□□□□ -2.69
RPRD1AQ96P16 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.74□□□□□ -2.69
RPRD1AQ96P16 MIR601-201ENST00000385256 79 ntBASIC-1.74□□□□□ -2.69
RPRD1AQ96P16 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.74□□□□□ -2.69
RPRD1AQ96P16 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.74□□□□□ -2.69
RPRD1AQ96P16 RNU6-80P-201ENST00000384195 107 ntBASIC-1.75□□□□□ -2.69
RPRD1AQ96P16 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.75□□□□□ -2.69
RPRD1AQ96P16 RNU6-904P-201ENST00000516206 101 ntBASIC-1.75□□□□□ -2.69
RPRD1AQ96P16 MIR4796-201ENST00000580742 81 ntBASIC-1.76□□□□□ -2.69
RPRD1AQ96P16 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.76□□□□□ -2.69
RPRD1AQ96P16 MIR521-2-201ENST00000384818 87 ntBASIC-1.77□□□□□ -2.69
RPRD1AQ96P16 MIR29B1-201ENST00000385015 81 ntBASIC-1.77□□□□□ -2.69
RPRD1AQ96P16 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.77□□□□□ -2.69
RPRD1AQ96P16 SNORD63.1-201ENST00000516178 80 ntBASIC-1.77□□□□□ -2.69
RPRD1AQ96P16 RNU6-659P-201ENST00000516454 104 ntBASIC-1.77□□□□□ -2.69
RPRD1AQ96P16 MIR5591-201ENST00000578248 65 ntBASIC-1.77□□□□□ -2.69
RPRD1AQ96P16 MIR6818-201ENST00000621576 65 ntBASIC-1.77□□□□□ -2.69
RPRD1AQ96P16 SNORA26.4-201ENST00000391188 123 ntBASIC-1.78□□□□□ -2.69
RPRD1AQ96P16 RNU2-51P-201ENST00000410708 197 ntBASIC-1.78□□□□□ -2.69
RPRD1AQ96P16 RNU6-346P-201ENST00000516288 111 ntBASIC-1.78□□□□□ -2.69
RPRD1AQ96P16 MIR6129-201ENST00000616087 109 ntBASIC-1.78□□□□□ -2.69
RPRD1AQ96P16 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.79□□□□□ -2.7
RPRD1AQ96P16 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.79□□□□□ -2.7
RPRD1AQ96P16 SNORD116-10-201ENST00000363791 102 ntBASIC-1.79□□□□□ -2.7
RPRD1AQ96P16 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.79□□□□□ -2.7
RPRD1AQ96P16 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.79□□□□□ -2.7
RPRD1AQ96P16 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.79□□□□□ -2.7
RPRD1AQ96P16 RNU7-154P-201ENST00000516194 62 ntBASIC-1.79□□□□□ -2.7
RPRD1AQ96P16 AC099654.10-201ENST00000640395 161 ntBASIC-1.79□□□□□ -2.7
RPRD1AQ96P16 RNU6-880P-201ENST00000384526 107 ntBASIC-1.8□□□□□ -2.7
RPRD1AQ96P16 SNORD115-33-201ENST00000363723 82 ntBASIC-1.81□□□□□ -2.7
RPRD1AQ96P16 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.81□□□□□ -2.7
RPRD1AQ96P16 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.81□□□□□ -2.7
RPRD1AQ96P16 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.81□□□□□ -2.7
RPRD1AQ96P16 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.82□□□□□ -2.7
RPRD1AQ96P16 MIR519A2-201ENST00000384990 87 ntBASIC-1.82□□□□□ -2.7
RPRD1AQ96P16 MIR889-201ENST00000401280 79 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 315 ms