Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.73□□□□□ -2.53
RPUSD4Q96CM3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.73□□□□□ -2.53
RPUSD4Q96CM3 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 RNU6-774P-201ENST00000363238 107 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 SNORD114-17-201ENST00000364699 75 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 RNU6-106P-201ENST00000384405 107 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 MIR590-201ENST00000385008 97 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 SCARNA18B-201ENST00000458806 135 ntBASIC-0.74□□□□□ -2.53
RPUSD4Q96CM3 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 RNU6-382P-201ENST00000365181 106 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 RNY1P7-201ENST00000384743 110 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 SNORD83B-201ENST00000386745 93 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 RNU6-158P-201ENST00000517104 100 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 YWHAEP3-201ENST00000582767 121 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 uc_338.19-201ENST00000616808 99 ntBASIC-0.75□□□□□ -2.53
RPUSD4Q96CM3 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNU4-32P-201ENST00000363404 141 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNU6-554P-201ENST00000410466 106 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNU2-51P-201ENST00000410708 197 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 AC021146.9-201ENST00000512503 156 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 SCARNA17-201ENST00000516183 144 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNA5SP470-201ENST00000516463 106 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 AC026421.1-201ENST00000519101 163 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 MIR548AG1-201ENST00000579932 66 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 MIR4636-201ENST00000582271 80 ntBASIC-0.76□□□□□ -2.53
RPUSD4Q96CM3 RNU6-208P-201ENST00000362431 107 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 RNU6-824P-201ENST00000363724 104 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 RNU6-260P-201ENST00000384092 107 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 MIR1236-201ENST00000408340 102 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 SNORD18.2-201ENST00000459604 70 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 RNU6-589P-201ENST00000516485 107 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 U6.81-201ENST00000612550 106 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 AL445584.3-201ENST00000617173 78 ntBASIC-0.77□□□□□ -2.53
RPUSD4Q96CM3 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 MIR203A-201ENST00000384836 110 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 MIR604-201ENST00000384880 94 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 snoU13.17-201ENST00000458802 104 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 RNU7-61P-201ENST00000515897 61 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 RNA5SP147-201ENST00000516493 109 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 MIR4796-201ENST00000580742 81 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 AL353803.5-201ENST00000599815 141 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 AL365222.1-201ENST00000614661 98 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 snoR1.1-201ENST00000628177 80 ntBASIC-0.78□□□□□ -2.53
RPUSD4Q96CM3 SNORA33.1-201ENST00000364957 130 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 SNORA62.4-201ENST00000365504 151 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 MIR224-201ENST00000384889 81 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 Z95118.1-201ENST00000421372 247 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 AC140658.3-201ENST00000567603 271 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 MIR378F-201ENST00000578143 78 ntBASIC-0.79□□□□□ -2.54
RPUSD4Q96CM3 RNU6-766P-201ENST00000362478 107 ntBASIC-0.8□□□□□ -2.54
RPUSD4Q96CM3 SNORA2.1-201ENST00000363089 137 ntBASIC-0.8□□□□□ -2.54
RPUSD4Q96CM3 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.8□□□□□ -2.54
RPUSD4Q96CM3 MT-TR-201ENST00000387439 65 ntBASIC-0.8□□□□□ -2.54
RPUSD4Q96CM3 SNORD115-22-201ENST00000364456 82 ntBASIC-0.81□□□□□ -2.54
RPUSD4Q96CM3 MIR8485-201ENST00000401372 91 ntBASIC-0.81□□□□□ -2.54
RPUSD4Q96CM3 MTATP8P2-201ENST00000435212 202 ntBASIC-0.81□□□□□ -2.54
RPUSD4Q96CM3 U6.96-201ENST00000636425 70 ntBASIC-0.81□□□□□ -2.54
RPUSD4Q96CM3 RNU6-22P-201ENST00000384355 107 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 RNU6-479P-201ENST00000516348 105 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 RNU6-752P-201ENST00000516376 102 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 AP002795.1-201ENST00000534879 84 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 MIR3657-201ENST00000584818 117 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 U7.3-201ENST00000616123 62 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 MIR4773-1-201ENST00000637203 78 ntBASIC-0.82□□□□□ -2.54
RPUSD4Q96CM3 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 MIR548M-201ENST00000408260 86 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 MIR1255B2-201ENST00000408618 67 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 RNU6-274P-201ENST00000459566 107 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 SNORD63.1-201ENST00000516178 80 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 MIR6509-201ENST00000614603 85 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 MIR6129-201ENST00000616087 109 ntBASIC-0.83□□□□□ -2.54
RPUSD4Q96CM3 SNORA19-201ENST00000384737 128 ntBASIC-0.84□□□□□ -2.54
RPUSD4Q96CM3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.84□□□□□ -2.54
RPUSD4Q96CM3 RNU6-758P-201ENST00000516292 89 ntBASIC-0.84□□□□□ -2.54
RPUSD4Q96CM3 RNU6-109P-201ENST00000516364 107 ntBASIC-0.84□□□□□ -2.54
RPUSD4Q96CM3 RNU6-184P-201ENST00000516514 107 ntBASIC-0.84□□□□□ -2.54
RPUSD4Q96CM3 MIR2052-201ENST00000636055 55 ntBASIC-0.85□□□□□ -2.55
RPUSD4Q96CM3 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.86□□□□□ -2.55
RPUSD4Q96CM3 AL691482.2-201ENST00000457453 84 ntBASIC-0.86□□□□□ -2.55
RPUSD4Q96CM3 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.86□□□□□ -2.55
RPUSD4Q96CM3 CYP3A54P-201ENST00000566950 75 ntBASIC-0.86□□□□□ -2.55
RPUSD4Q96CM3 MIR4324-201ENST00000584846 72 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms