Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.52□□□□□ -2.65
PTP4A1Q93096 MIR29B1-201ENST00000385015 81 ntBASIC-1.52□□□□□ -2.65
PTP4A1Q93096 MIR548I1-201ENST00000408810 149 ntBASIC-1.52□□□□□ -2.65
PTP4A1Q93096 AC026421.1-201ENST00000519101 163 ntBASIC-1.52□□□□□ -2.65
PTP4A1Q93096 MIR4777-201ENST00000583710 86 ntBASIC-1.52□□□□□ -2.65
PTP4A1Q93096 MIR409-201ENST00000362237 79 ntBASIC-1.53□□□□□ -2.65
PTP4A1Q93096 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.53□□□□□ -2.65
PTP4A1Q93096 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.53□□□□□ -2.65
PTP4A1Q93096 MIR3115-201ENST00000577915 68 ntBASIC-1.53□□□□□ -2.65
PTP4A1Q93096 RNU6-208P-201ENST00000362431 107 ntBASIC-1.54□□□□□ -2.66
PTP4A1Q93096 RNA5SP192-201ENST00000364404 120 ntBASIC-1.54□□□□□ -2.66
PTP4A1Q93096 RNA5SP292-201ENST00000390974 118 ntBASIC-1.54□□□□□ -2.66
PTP4A1Q93096 RNU6-795P-201ENST00000516323 103 ntBASIC-1.54□□□□□ -2.66
PTP4A1Q93096 RNU6-260P-201ENST00000384092 107 ntBASIC-1.55□□□□□ -2.66
PTP4A1Q93096 RNU6-880P-201ENST00000384526 107 ntBASIC-1.55□□□□□ -2.66
PTP4A1Q93096 SCARNA23-201ENST00000516060 130 ntBASIC-1.55□□□□□ -2.66
PTP4A1Q93096 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.56□□□□□ -2.66
PTP4A1Q93096 RNU6-10P-201ENST00000384036 107 ntBASIC-1.56□□□□□ -2.66
PTP4A1Q93096 MIR124-2-201ENST00000385081 109 ntBASIC-1.56□□□□□ -2.66
PTP4A1Q93096 RNU6-887P-201ENST00000410660 100 ntBASIC-1.56□□□□□ -2.66
PTP4A1Q93096 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.56□□□□□ -2.66
PTP4A1Q93096 MIR3165-201ENST00000579874 75 ntBASIC-1.56□□□□□ -2.66
PTP4A1Q93096 AC012531.4-201ENST00000616509 177 ntBASIC-1.56□□□□□ -2.66
PTP4A1Q93096 MIR4773-1-201ENST00000637203 78 ntBASIC-1.56□□□□□ -2.66
PTP4A1Q93096 RNU4-32P-201ENST00000363404 141 ntBASIC-1.57□□□□□ -2.66
PTP4A1Q93096 RNU6-382P-201ENST00000365181 106 ntBASIC-1.57□□□□□ -2.66
PTP4A1Q93096 SNORD58A-201ENST00000383875 65 ntBASIC-1.57□□□□□ -2.66
PTP4A1Q93096 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.57□□□□□ -2.66
PTP4A1Q93096 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
PTP4A1Q93096 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.57□□□□□ -2.66
PTP4A1Q93096 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.58□□□□□ -2.66
PTP4A1Q93096 MIR4464-201ENST00000580818 92 ntBASIC-1.58□□□□□ -2.66
PTP4A1Q93096 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.58□□□□□ -2.66
PTP4A1Q93096 RNU6-659P-201ENST00000516454 104 ntBASIC-1.59□□□□□ -2.66
PTP4A1Q93096 MIR6509-201ENST00000614603 85 ntBASIC-1.59□□□□□ -2.66
PTP4A1Q93096 SNORD116-10-201ENST00000363791 102 ntBASIC-1.6□□□□□ -2.67
PTP4A1Q93096 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.6□□□□□ -2.67
PTP4A1Q93096 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.6□□□□□ -2.67
PTP4A1Q93096 SNORA2.1-201ENST00000363089 137 ntBASIC-1.61□□□□□ -2.67
PTP4A1Q93096 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.61□□□□□ -2.67
PTP4A1Q93096 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.61□□□□□ -2.67
PTP4A1Q93096 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.61□□□□□ -2.67
PTP4A1Q93096 AL691482.2-201ENST00000457453 84 ntBASIC-1.61□□□□□ -2.67
PTP4A1Q93096 RNU7-134P-201ENST00000458997 64 ntBASIC-1.61□□□□□ -2.67
PTP4A1Q93096 RNU6-346P-201ENST00000516288 111 ntBASIC-1.61□□□□□ -2.67
PTP4A1Q93096 AL353803.5-201ENST00000599815 141 ntBASIC-1.61□□□□□ -2.67
PTP4A1Q93096 MIR6818-201ENST00000621576 65 ntBASIC-1.61□□□□□ -2.67
PTP4A1Q93096 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.62□□□□□ -2.67
PTP4A1Q93096 SNORD116-21-201ENST00000384507 92 ntBASIC-1.63□□□□□ -2.67
PTP4A1Q93096 snoU13.17-201ENST00000458802 104 ntBASIC-1.63□□□□□ -2.67
PTP4A1Q93096 RNU6-904P-201ENST00000516206 101 ntBASIC-1.63□□□□□ -2.67
PTP4A1Q93096 RNU6-907P-201ENST00000390924 102 ntBASIC-1.64□□□□□ -2.67
PTP4A1Q93096 SNORD57-201ENST00000448188 72 ntBASIC-1.64□□□□□ -2.67
PTP4A1Q93096 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.64□□□□□ -2.67
PTP4A1Q93096 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.65□□□□□ -2.67
PTP4A1Q93096 MIR527-201ENST00000385244 85 ntBASIC-1.65□□□□□ -2.67
PTP4A1Q93096 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.65□□□□□ -2.67
PTP4A1Q93096 AL445584.3-201ENST00000617173 78 ntBASIC-1.65□□□□□ -2.67
PTP4A1Q93096 SNORD90-201ENST00000391145 111 ntBASIC-1.66□□□□□ -2.68
PTP4A1Q93096 RNA5SP147-201ENST00000516493 109 ntBASIC-1.66□□□□□ -2.68
PTP4A1Q93096 RNU6-255P-201ENST00000516957 105 ntBASIC-1.66□□□□□ -2.68
PTP4A1Q93096 MIR4770-201ENST00000579149 58 ntBASIC-1.66□□□□□ -2.68
PTP4A1Q93096 MIR6888-201ENST00000621977 67 ntBASIC-1.66□□□□□ -2.68
PTP4A1Q93096 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.67□□□□□ -2.68
PTP4A1Q93096 RNU6-824P-201ENST00000363724 104 ntBASIC-1.67□□□□□ -2.68
PTP4A1Q93096 MIR1302-5-201ENST00000408164 150 ntBASIC-1.67□□□□□ -2.68
PTP4A1Q93096 MIR1236-201ENST00000408340 102 ntBASIC-1.67□□□□□ -2.68
PTP4A1Q93096 MIR3657-201ENST00000584818 117 ntBASIC-1.67□□□□□ -2.68
PTP4A1Q93096 RNU6-576P-201ENST00000390854 102 ntBASIC-1.68□□□□□ -2.68
PTP4A1Q93096 RNA5SP266-201ENST00000410273 108 ntBASIC-1.68□□□□□ -2.68
PTP4A1Q93096 HLA-S-202ENST00000425174 53 ntBASIC-1.68□□□□□ -2.68
PTP4A1Q93096 MIR4796-201ENST00000580742 81 ntBASIC-1.68□□□□□ -2.68
PTP4A1Q93096 RNU6-924P-201ENST00000362926 108 ntBASIC-1.69□□□□□ -2.68
PTP4A1Q93096 SNORD115-33-201ENST00000363723 82 ntBASIC-1.69□□□□□ -2.68
PTP4A1Q93096 SNORD116-14-201ENST00000383894 92 ntBASIC-1.69□□□□□ -2.68
PTP4A1Q93096 SNORD116-17-201ENST00000383929 92 ntBASIC-1.69□□□□□ -2.68
PTP4A1Q93096 RNU6-746P-201ENST00000384112 109 ntBASIC-1.69□□□□□ -2.68
PTP4A1Q93096 SNORD116-15-201ENST00000384445 92 ntBASIC-1.69□□□□□ -2.68
PTP4A1Q93096 SNORD116-19-201ENST00000384729 92 ntBASIC-1.69□□□□□ -2.68
PTP4A1Q93096 MIR203A-201ENST00000384836 110 ntBASIC-1.69□□□□□ -2.68
PTP4A1Q93096 MIR8485-201ENST00000401372 91 ntBASIC-1.69□□□□□ -2.68
PTP4A1Q93096 MIR5591-201ENST00000578248 65 ntBASIC-1.69□□□□□ -2.68
PTP4A1Q93096 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.7□□□□□ -2.68
PTP4A1Q93096 SNORA33.1-201ENST00000364957 130 ntBASIC-1.7□□□□□ -2.68
PTP4A1Q93096 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.7□□□□□ -2.68
PTP4A1Q93096 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.7□□□□□ -2.68
PTP4A1Q93096 SNORA26.4-201ENST00000391188 123 ntBASIC-1.7□□□□□ -2.68
PTP4A1Q93096 MIR1255B2-201ENST00000408618 67 ntBASIC-1.7□□□□□ -2.68
PTP4A1Q93096 SNORD63.1-201ENST00000516178 80 ntBASIC-1.7□□□□□ -2.68
PTP4A1Q93096 U6.81-201ENST00000612550 106 ntBASIC-1.7□□□□□ -2.68
PTP4A1Q93096 MIR6502-201ENST00000617296 76 ntBASIC-1.7□□□□□ -2.68
PTP4A1Q93096 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.71□□□□□ -2.68
PTP4A1Q93096 RNU6-752P-201ENST00000516376 102 ntBASIC-1.71□□□□□ -2.68
PTP4A1Q93096 RNU6-794P-201ENST00000517261 64 ntBASIC-1.71□□□□□ -2.68
PTP4A1Q93096 AC090425.1-201ENST00000610007 140 ntBASIC-1.71□□□□□ -2.68
PTP4A1Q93096 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.72□□□□□ -2.68
PTP4A1Q93096 RNU6-537P-201ENST00000517277 103 ntBASIC-1.72□□□□□ -2.68
PTP4A1Q93096 CYP3A54P-201ENST00000566950 75 ntBASIC-1.72□□□□□ -2.68
PTP4A1Q93096 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.72□□□□□ -2.68
PTP4A1Q93096 AC090617.8-201ENST00000623339 167 ntBASIC-1.72□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms