Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RNU6-644P-201ENST00000391155 98 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 RNU6-698P-201ENST00000363523 107 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 RNU6-34P-201ENST00000364874 107 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 AC130289.1-201ENST00000577321 73 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 U6.81-201ENST00000612550 106 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 MIR630-201ENST00000384957 97 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 AC025253.1-201ENST00000613623 543 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 RNU6-381P-201ENST00000391259 108 ntBASIC-1.51□□□□□ -2.65
ALMS1Q8TCU4 SNORD115-31-201ENST00000365318 82 ntBASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 RNU6-971P-201ENST00000516920 106 ntBASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 AC113139.1-201ENST00000605049 239 ntBASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 SNORD58A-201ENST00000383875 65 ntBASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 SNORD116-2-201ENST00000384274 95 ntBASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 AC006362.1-201ENST00000567392 174 ntBASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 SNORD113-3-201ENST00000364830 72 ntBASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 RNU6-130P-201ENST00000411112 103 ntBASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 MIR6844-201ENST00000637122 62 ntBASIC-1.52□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 MIR4796-201ENST00000580742 81 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 RNU6-668P-201ENST00000364180 107 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 RNU6-310P-201ENST00000384655 107 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 RNU6-768P-201ENST00000384683 107 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 SNORD90-201ENST00000391145 111 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 AL450471.1-201ENST00000447509 127 ntBASIC-1.53□□□□□ -2.65
ALMS1Q8TCU4 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.54□□□□□ -2.66
ALMS1Q8TCU4 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.54□□□□□ -2.66
ALMS1Q8TCU4 MIR1236-201ENST00000408340 102 ntBASIC-1.54□□□□□ -2.66
ALMS1Q8TCU4 MIR5690-201ENST00000583739 73 ntBASIC-1.54□□□□□ -2.66
ALMS1Q8TCU4 MIR548Z-201ENST00000584743 97 ntBASIC-1.54□□□□□ -2.66
ALMS1Q8TCU4 SNORD45.2-201ENST00000363552 72 ntBASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 SNORD116-16-201ENST00000384533 92 ntBASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 AC109635.3-201ENST00000529536 185 ntBASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 MIR4679-2-201ENST00000578358 77 ntBASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 SNORD116-10-201ENST00000363791 102 ntBASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 RNA5SP136-201ENST00000410906 107 ntBASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.55□□□□□ -2.66
ALMS1Q8TCU4 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 RNU6-598P-201ENST00000364017 105 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 MIR579-201ENST00000385221 98 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 MIR125B1-201ENST00000385236 88 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 AC080013.6-201ENST00000606185 215 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 RNY3P2-201ENST00000362918 102 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 RNU6-493P-201ENST00000391321 108 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 RNY3P8-201ENST00000411366 126 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 AL603755.1-201ENST00000619504 163 ntBASIC-1.56□□□□□ -2.66
ALMS1Q8TCU4 MIR1302-6-201ENST00000408466 90 ntBASIC-1.57□□□□□ -2.66
ALMS1Q8TCU4 SNORD63.2-201ENST00000516303 64 ntBASIC-1.57□□□□□ -2.66
ALMS1Q8TCU4 RNU6-345P-201ENST00000517001 107 ntBASIC-1.57□□□□□ -2.66
ALMS1Q8TCU4 SNORA75.5-201ENST00000391291 81 ntBASIC-1.57□□□□□ -2.66
ALMS1Q8TCU4 MIR4439-201ENST00000583746 80 ntBASIC-1.57□□□□□ -2.66
ALMS1Q8TCU4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.57□□□□□ -2.66
ALMS1Q8TCU4 RNU6-649P-201ENST00000384463 107 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 RNU7-121P-201ENST00000516604 62 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 AC103810.7-201ENST00000607821 91 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 MIR548P-201ENST00000408336 84 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 RNU6-982P-201ENST00000516216 102 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 RNU6-523P-201ENST00000516304 54 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 RNU6-176P-201ENST00000517196 105 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 SNORD45B-201ENST00000364617 72 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 RNU6-813P-201ENST00000384691 107 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 SNORD77.2-201ENST00000391045 68 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 RNY4P25-201ENST00000459254 96 ntBASIC-1.58□□□□□ -2.66
ALMS1Q8TCU4 RNU6-974P-201ENST00000384099 108 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 SNORA17.4-201ENST00000391287 132 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 RNU6-554P-201ENST00000410466 106 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 RNU6-781P-201ENST00000516377 101 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 SNORA40.15-201ENST00000516884 107 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 Z99129.1-201ENST00000612510 255 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 RNU6-624P-201ENST00000363411 107 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 SNORD116-29-201ENST00000384516 83 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 RNU6-780P-201ENST00000391030 104 ntBASIC-1.59□□□□□ -2.66
ALMS1Q8TCU4 RNU6-956P-201ENST00000458868 103 ntBASIC-1.59□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 244.4 ms