Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RNU6-838P-201ENST00000363399 108 ntBASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 RNU6-246P-201ENST00000384702 107 ntBASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 RNA5SP220-201ENST00000516298 104 ntBASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 MIR4421-201ENST00000578133 69 ntBASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 MIR548AG1-201ENST00000579932 66 ntBASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 RNA5SP268-201ENST00000516828 124 ntBASIC1.52□□□□□ -2.17
SNIP1Q8TAD8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
SNIP1Q8TAD8 MIR4490-201ENST00000582647 84 ntBASIC1.51□□□□□ -2.17
SNIP1Q8TAD8 SNORA70.25-201ENST00000612741 95 ntBASIC1.51□□□□□ -2.17
SNIP1Q8TAD8 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
SNIP1Q8TAD8 SNORD124-201ENST00000459577 104 ntBASIC1.5□□□□□ -2.17
SNIP1Q8TAD8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
SNIP1Q8TAD8 MIR18A-201ENST00000362310 71 ntBASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 Y_RNA.109-201ENST00000363215 102 ntBASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 MIR7107-201ENST00000611489 80 ntBASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 MIR6734-201ENST00000621166 68 ntBASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 MIR19B1-201ENST00000384829 87 ntBASIC1.48□□□□□ -2.17
SNIP1Q8TAD8 AC025627.3-201ENST00000582078 182 ntBASIC1.48□□□□□ -2.17
SNIP1Q8TAD8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 HMGN2P22-201ENST00000427588 175 ntBASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 AC244090.1-201ENST00000441884 93 ntBASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 RNU6-419P-201ENST00000517030 63 ntBASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 MIR4752-201ENST00000579672 72 ntBASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 AL353770.2-201ENST00000620024 78 ntBASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
SNIP1Q8TAD8 MIR20A-201ENST00000362279 71 ntBASIC1.46□□□□□ -2.18
SNIP1Q8TAD8 SNORD114-22-201ENST00000365423 72 ntBASIC1.46□□□□□ -2.18
SNIP1Q8TAD8 RNU6-337P-201ENST00000391243 106 ntBASIC1.46□□□□□ -2.18
SNIP1Q8TAD8 MIR200A-201ENST00000384875 90 ntBASIC1.45□□□□□ -2.18
SNIP1Q8TAD8 AC011195.1-201ENST00000578177 177 ntBASIC1.45□□□□□ -2.18
SNIP1Q8TAD8 SNORD115-25-201ENST00000362619 82 ntBASIC1.44□□□□□ -2.18
SNIP1Q8TAD8 SNORD114-26-201ENST00000363543 72 ntBASIC1.44□□□□□ -2.18
SNIP1Q8TAD8 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
SNIP1Q8TAD8 RNA5SP94-201ENST00000516917 108 ntBASIC1.44□□□□□ -2.18
SNIP1Q8TAD8 SNORD99-201ENST00000408612 74 ntBASIC1.43□□□□□ -2.18
SNIP1Q8TAD8 RNU7-154P-201ENST00000516194 62 ntBASIC1.43□□□□□ -2.18
SNIP1Q8TAD8 MIR6078-201ENST00000611069 100 ntBASIC1.43□□□□□ -2.18
SNIP1Q8TAD8 RNU6-247P-201ENST00000362636 107 ntBASIC1.42□□□□□ -2.18
SNIP1Q8TAD8 SNORD48-201ENST00000364953 64 ntBASIC1.42□□□□□ -2.18
SNIP1Q8TAD8 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
SNIP1Q8TAD8 MIR6773-201ENST00000612812 74 ntBASIC1.42□□□□□ -2.18
SNIP1Q8TAD8 AC022709.1-201ENST00000615967 87 ntBASIC1.42□□□□□ -2.18
SNIP1Q8TAD8 MIR429-201ENST00000362106 83 ntBASIC1.41□□□□□ -2.18
SNIP1Q8TAD8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SNIP1Q8TAD8 RNU6-458P-201ENST00000384179 107 ntBASIC1.41□□□□□ -2.18
SNIP1Q8TAD8 U6.58-201ENST00000613107 107 ntBASIC1.41□□□□□ -2.18
SNIP1Q8TAD8 RNU6-924P-201ENST00000362926 108 ntBASIC1.4□□□□□ -2.19
SNIP1Q8TAD8 MIR579-201ENST00000385221 98 ntBASIC1.4□□□□□ -2.19
SNIP1Q8TAD8 RNA5SP255-201ENST00000516370 107 ntBASIC1.4□□□□□ -2.19
SNIP1Q8TAD8 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
SNIP1Q8TAD8 SNORD2-201ENST00000459163 69 ntBASIC1.39□□□□□ -2.19
SNIP1Q8TAD8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SNIP1Q8TAD8 RNU4-45P-201ENST00000365469 141 ntBASIC1.38□□□□□ -2.19
SNIP1Q8TAD8 RNA5SP470-201ENST00000516463 106 ntBASIC1.38□□□□□ -2.19
SNIP1Q8TAD8 RNU1-29P-201ENST00000606574 126 ntBASIC1.38□□□□□ -2.19
SNIP1Q8TAD8 MIR6779-201ENST00000617283 64 ntBASIC1.38□□□□□ -2.19
SNIP1Q8TAD8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.37□□□□□ -2.19
SNIP1Q8TAD8 RNY1P8-201ENST00000383970 114 ntBASIC1.37□□□□□ -2.19
SNIP1Q8TAD8 SNORA49-201ENST00000386157 136 ntBASIC1.37□□□□□ -2.19
SNIP1Q8TAD8 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
SNIP1Q8TAD8 MIR6515-201ENST00000619843 57 ntBASIC1.37□□□□□ -2.19
SNIP1Q8TAD8 MIR96-201ENST00000362288 78 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 RNU1-93P-201ENST00000364704 169 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 SNORD114-24-201ENST00000365029 72 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 RNA5SP363-201ENST00000365072 115 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 MIR5706-201ENST00000579841 80 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 RNU6-598P-201ENST00000364017 105 ntBASIC1.35□□□□□ -2.19
SNIP1Q8TAD8 SNORD114-29-201ENST00000364819 70 ntBASIC1.35□□□□□ -2.19
SNIP1Q8TAD8 PVT1_3.1-201ENST00000620853 95 ntBASIC1.35□□□□□ -2.19
SNIP1Q8TAD8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
SNIP1Q8TAD8 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
SNIP1Q8TAD8 RNU6-1206P-201ENST00000516339 103 ntBASIC1.34□□□□□ -2.19
SNIP1Q8TAD8 RNU7-151P-201ENST00000516930 53 ntBASIC1.34□□□□□ -2.19
SNIP1Q8TAD8 RNU7-188P-201ENST00000517063 64 ntBASIC1.34□□□□□ -2.19
SNIP1Q8TAD8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 MIRLET7B-201ENST00000385140 83 ntBASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 RNA5SP222-201ENST00000411039 105 ntBASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 AC069271.1-201ENST00000445577 156 ntBASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 RNU7-160P-201ENST00000516660 62 ntBASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 U2.18-201ENST00000622185 84 ntBASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 Y_RNA.69-201ENST00000362885 109 ntBASIC1.32□□□□□ -2.2
SNIP1Q8TAD8 RNU6-986P-201ENST00000363133 102 ntBASIC1.32□□□□□ -2.2
SNIP1Q8TAD8 RNA5SP325-201ENST00000363756 130 ntBASIC1.32□□□□□ -2.2
SNIP1Q8TAD8 RNU6-1223P-201ENST00000517124 104 ntBASIC1.32□□□□□ -2.2
SNIP1Q8TAD8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SNIP1Q8TAD8 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
SNIP1Q8TAD8 RNU6-1250P-201ENST00000391218 107 ntBASIC1.31□□□□□ -2.2
SNIP1Q8TAD8 RNU6-782P-201ENST00000516852 104 ntBASIC1.31□□□□□ -2.2
SNIP1Q8TAD8 RNU6-175P-201ENST00000516896 107 ntBASIC1.31□□□□□ -2.2
SNIP1Q8TAD8 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 RNU6-502P-201ENST00000362419 108 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 MIR151B-201ENST00000584249 96 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms