Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RNU6-838P-201ENST00000363399 108 ntBASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 RNU6-246P-201ENST00000384702 107 ntBASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 RNA5SP220-201ENST00000516298 104 ntBASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 MIR4421-201ENST00000578133 69 ntBASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 MIR548AG1-201ENST00000579932 66 ntBASIC1.53□□□□□ -2.16
SNIP1Q8TAD8 RNA5SP268-201ENST00000516828 124 ntBASIC1.52□□□□□ -2.17
SNIP1Q8TAD8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
SNIP1Q8TAD8 MIR4490-201ENST00000582647 84 ntBASIC1.51□□□□□ -2.17
SNIP1Q8TAD8 SNORA70.25-201ENST00000612741 95 ntBASIC1.51□□□□□ -2.17
SNIP1Q8TAD8 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
SNIP1Q8TAD8 SNORD124-201ENST00000459577 104 ntBASIC1.5□□□□□ -2.17
SNIP1Q8TAD8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
SNIP1Q8TAD8 MIR18A-201ENST00000362310 71 ntBASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 Y_RNA.109-201ENST00000363215 102 ntBASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 MIR7107-201ENST00000611489 80 ntBASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 MIR6734-201ENST00000621166 68 ntBASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
SNIP1Q8TAD8 MIR19B1-201ENST00000384829 87 ntBASIC1.48□□□□□ -2.17
SNIP1Q8TAD8 AC025627.3-201ENST00000582078 182 ntBASIC1.48□□□□□ -2.17
SNIP1Q8TAD8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 HMGN2P22-201ENST00000427588 175 ntBASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 AC244090.1-201ENST00000441884 93 ntBASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 RNU6-419P-201ENST00000517030 63 ntBASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 MIR4752-201ENST00000579672 72 ntBASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 AL353770.2-201ENST00000620024 78 ntBASIC1.47□□□□□ -2.17
SNIP1Q8TAD8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
SNIP1Q8TAD8 MIR20A-201ENST00000362279 71 ntBASIC1.46□□□□□ -2.18
SNIP1Q8TAD8 SNORD114-22-201ENST00000365423 72 ntBASIC1.46□□□□□ -2.18
SNIP1Q8TAD8 RNU6-337P-201ENST00000391243 106 ntBASIC1.46□□□□□ -2.18
SNIP1Q8TAD8 MIR200A-201ENST00000384875 90 ntBASIC1.45□□□□□ -2.18
SNIP1Q8TAD8 AC011195.1-201ENST00000578177 177 ntBASIC1.45□□□□□ -2.18
SNIP1Q8TAD8 SNORD115-25-201ENST00000362619 82 ntBASIC1.44□□□□□ -2.18
SNIP1Q8TAD8 SNORD114-26-201ENST00000363543 72 ntBASIC1.44□□□□□ -2.18
SNIP1Q8TAD8 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
SNIP1Q8TAD8 RNA5SP94-201ENST00000516917 108 ntBASIC1.44□□□□□ -2.18
SNIP1Q8TAD8 SNORD99-201ENST00000408612 74 ntBASIC1.43□□□□□ -2.18
SNIP1Q8TAD8 RNU7-154P-201ENST00000516194 62 ntBASIC1.43□□□□□ -2.18
SNIP1Q8TAD8 MIR6078-201ENST00000611069 100 ntBASIC1.43□□□□□ -2.18
SNIP1Q8TAD8 RNU6-247P-201ENST00000362636 107 ntBASIC1.42□□□□□ -2.18
SNIP1Q8TAD8 SNORD48-201ENST00000364953 64 ntBASIC1.42□□□□□ -2.18
SNIP1Q8TAD8 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
SNIP1Q8TAD8 MIR6773-201ENST00000612812 74 ntBASIC1.42□□□□□ -2.18
SNIP1Q8TAD8 AC022709.1-201ENST00000615967 87 ntBASIC1.42□□□□□ -2.18
SNIP1Q8TAD8 MIR429-201ENST00000362106 83 ntBASIC1.41□□□□□ -2.18
SNIP1Q8TAD8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SNIP1Q8TAD8 RNU6-458P-201ENST00000384179 107 ntBASIC1.41□□□□□ -2.18
SNIP1Q8TAD8 U6.58-201ENST00000613107 107 ntBASIC1.41□□□□□ -2.18
SNIP1Q8TAD8 RNU6-924P-201ENST00000362926 108 ntBASIC1.4□□□□□ -2.19
SNIP1Q8TAD8 MIR579-201ENST00000385221 98 ntBASIC1.4□□□□□ -2.19
SNIP1Q8TAD8 RNA5SP255-201ENST00000516370 107 ntBASIC1.4□□□□□ -2.19
SNIP1Q8TAD8 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
SNIP1Q8TAD8 SNORD2-201ENST00000459163 69 ntBASIC1.39□□□□□ -2.19
SNIP1Q8TAD8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SNIP1Q8TAD8 RNU4-45P-201ENST00000365469 141 ntBASIC1.38□□□□□ -2.19
SNIP1Q8TAD8 RNA5SP470-201ENST00000516463 106 ntBASIC1.38□□□□□ -2.19
SNIP1Q8TAD8 RNU1-29P-201ENST00000606574 126 ntBASIC1.38□□□□□ -2.19
SNIP1Q8TAD8 MIR6779-201ENST00000617283 64 ntBASIC1.38□□□□□ -2.19
SNIP1Q8TAD8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.37□□□□□ -2.19
SNIP1Q8TAD8 RNY1P8-201ENST00000383970 114 ntBASIC1.37□□□□□ -2.19
SNIP1Q8TAD8 SNORA49-201ENST00000386157 136 ntBASIC1.37□□□□□ -2.19
SNIP1Q8TAD8 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
SNIP1Q8TAD8 MIR6515-201ENST00000619843 57 ntBASIC1.37□□□□□ -2.19
SNIP1Q8TAD8 MIR96-201ENST00000362288 78 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 RNU1-93P-201ENST00000364704 169 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 SNORD114-24-201ENST00000365029 72 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 RNA5SP363-201ENST00000365072 115 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 MIR5706-201ENST00000579841 80 ntBASIC1.36□□□□□ -2.19
SNIP1Q8TAD8 RNU6-598P-201ENST00000364017 105 ntBASIC1.35□□□□□ -2.19
SNIP1Q8TAD8 SNORD114-29-201ENST00000364819 70 ntBASIC1.35□□□□□ -2.19
SNIP1Q8TAD8 PVT1_3.1-201ENST00000620853 95 ntBASIC1.35□□□□□ -2.19
SNIP1Q8TAD8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
SNIP1Q8TAD8 SNORD26-201ENST00000384147 75 ntBASIC1.34□□□□□ -2.19
SNIP1Q8TAD8 RNU6-1206P-201ENST00000516339 103 ntBASIC1.34□□□□□ -2.19
SNIP1Q8TAD8 RNU7-151P-201ENST00000516930 53 ntBASIC1.34□□□□□ -2.19
SNIP1Q8TAD8 RNU7-188P-201ENST00000517063 64 ntBASIC1.34□□□□□ -2.19
SNIP1Q8TAD8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 MIRLET7B-201ENST00000385140 83 ntBASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 RNA5SP222-201ENST00000411039 105 ntBASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 AC069271.1-201ENST00000445577 156 ntBASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 RNU7-160P-201ENST00000516660 62 ntBASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 U2.18-201ENST00000622185 84 ntBASIC1.33□□□□□ -2.2
SNIP1Q8TAD8 Y_RNA.69-201ENST00000362885 109 ntBASIC1.32□□□□□ -2.2
SNIP1Q8TAD8 RNU6-986P-201ENST00000363133 102 ntBASIC1.32□□□□□ -2.2
SNIP1Q8TAD8 RNA5SP325-201ENST00000363756 130 ntBASIC1.32□□□□□ -2.2
SNIP1Q8TAD8 RNU6-1223P-201ENST00000517124 104 ntBASIC1.32□□□□□ -2.2
SNIP1Q8TAD8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SNIP1Q8TAD8 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
SNIP1Q8TAD8 RNU6-1250P-201ENST00000391218 107 ntBASIC1.31□□□□□ -2.2
SNIP1Q8TAD8 RNU6-782P-201ENST00000516852 104 ntBASIC1.31□□□□□ -2.2
SNIP1Q8TAD8 RNU6-175P-201ENST00000516896 107 ntBASIC1.31□□□□□ -2.2
SNIP1Q8TAD8 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 RNU6-502P-201ENST00000362419 108 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 RNA5SP404-201ENST00000517118 132 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 MIR151B-201ENST00000584249 96 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
SNIP1Q8TAD8 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 222.6 ms