Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC243829.3-201ENST00000622177 108 ntBASIC1.46□□□□□ -2.18
NEDD1Q8NHV4 U6.96-201ENST00000636425 70 ntBASIC1.46□□□□□ -2.18
NEDD1Q8NHV4 SNORA36.1-201ENST00000363424 132 ntBASIC1.45□□□□□ -2.18
NEDD1Q8NHV4 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
NEDD1Q8NHV4 MIR573-201ENST00000384964 99 ntBASIC1.44□□□□□ -2.18
NEDD1Q8NHV4 MIR527-201ENST00000385244 85 ntBASIC1.44□□□□□ -2.18
NEDD1Q8NHV4 MIR1255B2-201ENST00000408618 67 ntBASIC1.44□□□□□ -2.18
NEDD1Q8NHV4 RNU6-955P-201ENST00000410497 104 ntBASIC1.44□□□□□ -2.18
NEDD1Q8NHV4 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
NEDD1Q8NHV4 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
NEDD1Q8NHV4 MIR150-201ENST00000385048 84 ntBASIC1.43□□□□□ -2.18
NEDD1Q8NHV4 RNU6-172P-201ENST00000411000 93 ntBASIC1.43□□□□□ -2.18
NEDD1Q8NHV4 MIR4452-201ENST00000583004 71 ntBASIC1.43□□□□□ -2.18
NEDD1Q8NHV4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.43□□□□□ -2.18
NEDD1Q8NHV4 MIR1276-201ENST00000408707 83 ntBASIC1.42□□□□□ -2.18
NEDD1Q8NHV4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.42□□□□□ -2.18
NEDD1Q8NHV4 RNU6-419P-201ENST00000517030 63 ntBASIC1.42□□□□□ -2.18
NEDD1Q8NHV4 SNORA70.25-201ENST00000612741 95 ntBASIC1.42□□□□□ -2.18
NEDD1Q8NHV4 RNU6-924P-201ENST00000362926 108 ntBASIC1.41□□□□□ -2.18
NEDD1Q8NHV4 Y_RNA.109-201ENST00000363215 102 ntBASIC1.41□□□□□ -2.18
NEDD1Q8NHV4 RNU6-337P-201ENST00000391243 106 ntBASIC1.41□□□□□ -2.18
NEDD1Q8NHV4 SNORD110-201ENST00000408189 75 ntBASIC1.41□□□□□ -2.18
NEDD1Q8NHV4 AC006210.1-201ENST00000424882 111 ntBASIC1.41□□□□□ -2.18
NEDD1Q8NHV4 AC243829.6-201ENST00000612652 106 ntBASIC1.41□□□□□ -2.18
NEDD1Q8NHV4 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
NEDD1Q8NHV4 RNU6-246P-201ENST00000384702 107 ntBASIC1.4□□□□□ -2.19
NEDD1Q8NHV4 SNORA25-201ENST00000384384 134 ntBASIC1.39□□□□□ -2.19
NEDD1Q8NHV4 RNU6-939P-201ENST00000384634 107 ntBASIC1.39□□□□□ -2.19
NEDD1Q8NHV4 RNU6-1250P-201ENST00000391218 107 ntBASIC1.39□□□□□ -2.19
NEDD1Q8NHV4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
NEDD1Q8NHV4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
NEDD1Q8NHV4 RNU6-986P-201ENST00000363133 102 ntBASIC1.38□□□□□ -2.19
NEDD1Q8NHV4 MIR222-201ENST00000384992 110 ntBASIC1.38□□□□□ -2.19
NEDD1Q8NHV4 HMGN2P22-201ENST00000427588 175 ntBASIC1.38□□□□□ -2.19
NEDD1Q8NHV4 RNA5SP227-201ENST00000516184 113 ntBASIC1.38□□□□□ -2.19
NEDD1Q8NHV4 RNU1-29P-201ENST00000606574 126 ntBASIC1.38□□□□□ -2.19
NEDD1Q8NHV4 MIR7107-201ENST00000611489 80 ntBASIC1.38□□□□□ -2.19
NEDD1Q8NHV4 SNORA49-201ENST00000386157 136 ntBASIC1.36□□□□□ -2.19
NEDD1Q8NHV4 SNORD124-201ENST00000459577 104 ntBASIC1.36□□□□□ -2.19
NEDD1Q8NHV4 MIR4752-201ENST00000579672 72 ntBASIC1.36□□□□□ -2.19
NEDD1Q8NHV4 AC025627.3-201ENST00000582078 182 ntBASIC1.36□□□□□ -2.19
NEDD1Q8NHV4 MIR19B1-201ENST00000384829 87 ntBASIC1.35□□□□□ -2.19
NEDD1Q8NHV4 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
NEDD1Q8NHV4 FABP5P4-201ENST00000437203 171 ntBASIC1.35□□□□□ -2.19
NEDD1Q8NHV4 RNA5SP268-201ENST00000516828 124 ntBASIC1.35□□□□□ -2.19
NEDD1Q8NHV4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.35□□□□□ -2.19
NEDD1Q8NHV4 MIR18A-201ENST00000362310 71 ntBASIC1.34□□□□□ -2.19
NEDD1Q8NHV4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
NEDD1Q8NHV4 RNA5SP102-201ENST00000516865 106 ntBASIC1.34□□□□□ -2.19
NEDD1Q8NHV4 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
NEDD1Q8NHV4 SNORD115-25-201ENST00000362619 82 ntBASIC1.33□□□□□ -2.2
NEDD1Q8NHV4 RNU6-247P-201ENST00000362636 107 ntBASIC1.33□□□□□ -2.2
NEDD1Q8NHV4 AC244090.1-201ENST00000441884 93 ntBASIC1.32□□□□□ -2.2
NEDD1Q8NHV4 RNU7-154P-201ENST00000516194 62 ntBASIC1.32□□□□□ -2.2
NEDD1Q8NHV4 MIR6773-201ENST00000612812 74 ntBASIC1.32□□□□□ -2.2
NEDD1Q8NHV4 RNU6-458P-201ENST00000384179 107 ntBASIC1.31□□□□□ -2.2
NEDD1Q8NHV4 MIR579-201ENST00000385221 98 ntBASIC1.31□□□□□ -2.2
NEDD1Q8NHV4 RNA5SP94-201ENST00000516917 108 ntBASIC1.31□□□□□ -2.2
NEDD1Q8NHV4 U6.58-201ENST00000613107 107 ntBASIC1.31□□□□□ -2.2
NEDD1Q8NHV4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
NEDD1Q8NHV4 RNU6-724P-201ENST00000390958 105 ntBASIC1.3□□□□□ -2.2
NEDD1Q8NHV4 RNA5SP480-201ENST00000516840 109 ntBASIC1.3□□□□□ -2.2
NEDD1Q8NHV4 MIR4295-201ENST00000585286 85 ntBASIC1.3□□□□□ -2.2
NEDD1Q8NHV4 MIR20A-201ENST00000362279 71 ntBASIC1.29□□□□□ -2.2
NEDD1Q8NHV4 MIR96-201ENST00000362288 78 ntBASIC1.29□□□□□ -2.2
NEDD1Q8NHV4 RNU6-598P-201ENST00000364017 105 ntBASIC1.29□□□□□ -2.2
NEDD1Q8NHV4 SNORD114-22-201ENST00000365423 72 ntBASIC1.29□□□□□ -2.2
NEDD1Q8NHV4 U2.18-201ENST00000622185 84 ntBASIC1.29□□□□□ -2.2
NEDD1Q8NHV4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
NEDD1Q8NHV4 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
NEDD1Q8NHV4 Y_RNA.69-201ENST00000362885 109 ntBASIC1.27□□□□□ -2.21
NEDD1Q8NHV4 RNU6-1206P-201ENST00000516339 103 ntBASIC1.27□□□□□ -2.21
NEDD1Q8NHV4 RNU7-151P-201ENST00000516930 53 ntBASIC1.27□□□□□ -2.21
NEDD1Q8NHV4 AC011195.1-201ENST00000578177 177 ntBASIC1.27□□□□□ -2.21
NEDD1Q8NHV4 MIR6515-201ENST00000619843 57 ntBASIC1.27□□□□□ -2.21
NEDD1Q8NHV4 MIR200A-201ENST00000384875 90 ntBASIC1.26□□□□□ -2.21
NEDD1Q8NHV4 MIRLET7B-201ENST00000385140 83 ntBASIC1.26□□□□□ -2.21
NEDD1Q8NHV4 SNORD99-201ENST00000408612 74 ntBASIC1.26□□□□□ -2.21
NEDD1Q8NHV4 RNA5SP255-201ENST00000516370 107 ntBASIC1.26□□□□□ -2.21
NEDD1Q8NHV4 RNU6-175P-201ENST00000516896 107 ntBASIC1.26□□□□□ -2.21
NEDD1Q8NHV4 MIR548AL-201ENST00000578416 97 ntBASIC1.26□□□□□ -2.21
NEDD1Q8NHV4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
NEDD1Q8NHV4 RNY1P8-201ENST00000383970 114 ntBASIC1.24□□□□□ -2.21
NEDD1Q8NHV4 RNU7-160P-201ENST00000516660 62 ntBASIC1.24□□□□□ -2.21
NEDD1Q8NHV4 SNORD114-21-201ENST00000606412 72 ntBASIC1.24□□□□□ -2.21
NEDD1Q8NHV4 RNU6-502P-201ENST00000362419 108 ntBASIC1.23□□□□□ -2.21
NEDD1Q8NHV4 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
NEDD1Q8NHV4 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.23□□□□□ -2.21
NEDD1Q8NHV4 MIR6767-201ENST00000637302 66 ntBASIC1.23□□□□□ -2.21
NEDD1Q8NHV4 SNORD114-27-201ENST00000363766 70 ntBASIC1.22□□□□□ -2.21
NEDD1Q8NHV4 AC069271.1-201ENST00000445577 156 ntBASIC1.22□□□□□ -2.21
NEDD1Q8NHV4 RNA5SP470-201ENST00000516463 106 ntBASIC1.22□□□□□ -2.21
NEDD1Q8NHV4 SNORD114-26-201ENST00000363543 72 ntBASIC1.21□□□□□ -2.22
NEDD1Q8NHV4 RNU6-1232P-201ENST00000516299 86 ntBASIC1.21□□□□□ -2.22
NEDD1Q8NHV4 RNU7-188P-201ENST00000517063 64 ntBASIC1.21□□□□□ -2.22
NEDD1Q8NHV4 MIR5706-201ENST00000579841 80 ntBASIC1.21□□□□□ -2.22
NEDD1Q8NHV4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
NEDD1Q8NHV4 MIR125B1-201ENST00000385236 88 ntBASIC1.2□□□□□ -2.22
NEDD1Q8NHV4 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
NEDD1Q8NHV4 RNU6-782P-201ENST00000516852 104 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms