Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.91□□□□□ -2.72
CCDC112Q8NEF3 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.91□□□□□ -2.72
CCDC112Q8NEF3 MIR889-201ENST00000401280 79 ntBASIC-1.91□□□□□ -2.72
CCDC112Q8NEF3 AC008737.2-201ENST00000599446 118 ntBASIC-1.91□□□□□ -2.72
CCDC112Q8NEF3 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.92□□□□□ -2.72
CCDC112Q8NEF3 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.92□□□□□ -2.72
CCDC112Q8NEF3 RNU6-861P-201ENST00000516745 106 ntBASIC-1.92□□□□□ -2.72
CCDC112Q8NEF3 MIR6129-201ENST00000616087 109 ntBASIC-1.92□□□□□ -2.72
CCDC112Q8NEF3 RNU5F-1-201ENST00000362507 117 ntBASIC-1.93□□□□□ -2.72
CCDC112Q8NEF3 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.93□□□□□ -2.72
CCDC112Q8NEF3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.93□□□□□ -2.72
CCDC112Q8NEF3 RNU6-80P-201ENST00000384195 107 ntBASIC-1.93□□□□□ -2.72
CCDC112Q8NEF3 MIR568-201ENST00000385036 95 ntBASIC-1.93□□□□□ -2.72
CCDC112Q8NEF3 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.93□□□□□ -2.72
CCDC112Q8NEF3 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.93□□□□□ -2.72
CCDC112Q8NEF3 MIR6739-201ENST00000622461 75 ntBASIC-1.93□□□□□ -2.72
CCDC112Q8NEF3 AC091912.2-201ENST00000624798 167 ntBASIC-1.93□□□□□ -2.72
CCDC112Q8NEF3 MIR507-201ENST00000385234 94 ntBASIC-1.94□□□□□ -2.72
CCDC112Q8NEF3 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.94□□□□□ -2.72
CCDC112Q8NEF3 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.94□□□□□ -2.72
CCDC112Q8NEF3 MTND3P2-201ENST00000438452 342 ntBASIC-1.94□□□□□ -2.72
CCDC112Q8NEF3 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.94□□□□□ -2.72
CCDC112Q8NEF3 MIR548X2-201ENST00000579776 100 ntBASIC-1.94□□□□□ -2.72
CCDC112Q8NEF3 MIR4777-201ENST00000583710 86 ntBASIC-1.94□□□□□ -2.72
CCDC112Q8NEF3 U6.81-201ENST00000612550 106 ntBASIC-1.94□□□□□ -2.72
CCDC112Q8NEF3 MIR1246-201ENST00000636535 73 ntBASIC-1.94□□□□□ -2.72
CCDC112Q8NEF3 RNU6-682P-201ENST00000363843 106 ntBASIC-1.95□□□□□ -2.72
CCDC112Q8NEF3 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.95□□□□□ -2.72
CCDC112Q8NEF3 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.95□□□□□ -2.72
CCDC112Q8NEF3 MTCYBP9-201ENST00000431021 303 ntBASIC-1.95□□□□□ -2.72
CCDC112Q8NEF3 RNU6-518P-201ENST00000516056 96 ntBASIC-1.95□□□□□ -2.72
CCDC112Q8NEF3 MIR6502-201ENST00000617296 76 ntBASIC-1.95□□□□□ -2.72
CCDC112Q8NEF3 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.96□□□□□ -2.72
CCDC112Q8NEF3 MIR606-201ENST00000384851 96 ntBASIC-1.96□□□□□ -2.72
CCDC112Q8NEF3 SNORA19.1-201ENST00000410656 129 ntBASIC-1.96□□□□□ -2.72
CCDC112Q8NEF3 RNU6-732P-201ENST00000516033 103 ntBASIC-1.96□□□□□ -2.72
CCDC112Q8NEF3 AP002795.1-201ENST00000534879 84 ntBASIC-1.96□□□□□ -2.72
CCDC112Q8NEF3 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.97□□□□□ -2.72
CCDC112Q8NEF3 SNORD19-201ENST00000391191 68 ntBASIC-1.97□□□□□ -2.72
CCDC112Q8NEF3 RNU7-120P-201ENST00000459334 63 ntBASIC-1.97□□□□□ -2.72
CCDC112Q8NEF3 MIR4770-201ENST00000579149 58 ntBASIC-1.97□□□□□ -2.72
CCDC112Q8NEF3 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.97□□□□□ -2.72
CCDC112Q8NEF3 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.98□□□□□ -2.73
CCDC112Q8NEF3 MIR5009-201ENST00000578736 100 ntBASIC-1.98□□□□□ -2.73
CCDC112Q8NEF3 MIR6874-201ENST00000635894 71 ntBASIC-1.98□□□□□ -2.73
CCDC112Q8NEF3 AL021921.1-201ENST00000442774 93 ntBASIC-1.99□□□□□ -2.73
CCDC112Q8NEF3 RNU6-774P-201ENST00000363238 107 ntBASIC-2□□□□□ -2.73
CCDC112Q8NEF3 Y_RNA.307-201ENST00000365022 117 ntBASIC-2□□□□□ -2.73
CCDC112Q8NEF3 SNORD116-18-201ENST00000383961 92 ntBASIC-2□□□□□ -2.73
CCDC112Q8NEF3 Y_RNA.459-201ENST00000384251 102 ntBASIC-2□□□□□ -2.73
CCDC112Q8NEF3 MIR1302-3-201ENST00000408128 138 ntBASIC-2□□□□□ -2.73
CCDC112Q8NEF3 MIR5683-201ENST00000636514 76 ntBASIC-2□□□□□ -2.73
CCDC112Q8NEF3 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.01□□□□□ -2.73
CCDC112Q8NEF3 RNU6-246P-201ENST00000384702 107 ntBASIC-2.01□□□□□ -2.73
CCDC112Q8NEF3 AL078595.1-201ENST00000404458 226 ntBASIC-2.01□□□□□ -2.73
CCDC112Q8NEF3 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.01□□□□□ -2.73
CCDC112Q8NEF3 RNU6-394P-201ENST00000410735 107 ntBASIC-2.01□□□□□ -2.73
CCDC112Q8NEF3 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.01□□□□□ -2.73
CCDC112Q8NEF3 U7.5-201ENST00000517224 61 ntBASIC-2.01□□□□□ -2.73
CCDC112Q8NEF3 MIR548AG1-201ENST00000579932 66 ntBASIC-2.01□□□□□ -2.73
CCDC112Q8NEF3 MIR4490-201ENST00000582647 84 ntBASIC-2.01□□□□□ -2.73
CCDC112Q8NEF3 AC012531.4-201ENST00000616509 177 ntBASIC-2.01□□□□□ -2.73
CCDC112Q8NEF3 SNORD58A-201ENST00000383875 65 ntBASIC-2.02□□□□□ -2.73
CCDC112Q8NEF3 RNU6-738P-201ENST00000384531 106 ntBASIC-2.02□□□□□ -2.73
CCDC112Q8NEF3 MIR569-201ENST00000385228 96 ntBASIC-2.02□□□□□ -2.73
CCDC112Q8NEF3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.02□□□□□ -2.73
CCDC112Q8NEF3 AL118496.2-201ENST00000448300 230 ntBASIC-2.02□□□□□ -2.73
CCDC112Q8NEF3 RNU6-795P-201ENST00000516323 103 ntBASIC-2.02□□□□□ -2.73
CCDC112Q8NEF3 MIR4520-1-201ENST00000582609 70 ntBASIC-2.02□□□□□ -2.73
CCDC112Q8NEF3 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.03□□□□□ -2.73
CCDC112Q8NEF3 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.03□□□□□ -2.73
CCDC112Q8NEF3 RNU7-88P-201ENST00000458752 63 ntBASIC-2.03□□□□□ -2.73
CCDC112Q8NEF3 RNY4P27-201ENST00000363341 96 ntBASIC-2.04□□□□□ -2.74
CCDC112Q8NEF3 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.04□□□□□ -2.74
CCDC112Q8NEF3 MIR4796-201ENST00000580742 81 ntBASIC-2.04□□□□□ -2.74
CCDC112Q8NEF3 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.05□□□□□ -2.74
CCDC112Q8NEF3 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.05□□□□□ -2.74
CCDC112Q8NEF3 AC090616.4-201ENST00000448026 115 ntBASIC-2.05□□□□□ -2.74
CCDC112Q8NEF3 RNU6-772P-201ENST00000516042 105 ntBASIC-2.05□□□□□ -2.74
CCDC112Q8NEF3 RNU6-752P-201ENST00000516376 102 ntBASIC-2.05□□□□□ -2.74
CCDC112Q8NEF3 AL157777.2-201ENST00000258070 137 ntBASIC-2.06□□□□□ -2.74
CCDC112Q8NEF3 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.07□□□□□ -2.74
CCDC112Q8NEF3 RNU6-867P-201ENST00000364956 107 ntBASIC-2.07□□□□□ -2.74
CCDC112Q8NEF3 RPL35AP4-201ENST00000412007 102 ntBASIC-2.07□□□□□ -2.74
CCDC112Q8NEF3 RNU6-972P-201ENST00000391208 107 ntBASIC-2.08□□□□□ -2.74
CCDC112Q8NEF3 RNA5SP272-201ENST00000516095 111 ntBASIC-2.08□□□□□ -2.74
CCDC112Q8NEF3 RNU6-168P-201ENST00000516189 101 ntBASIC-2.08□□□□□ -2.74
CCDC112Q8NEF3 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.08□□□□□ -2.74
CCDC112Q8NEF3 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.08□□□□□ -2.74
CCDC112Q8NEF3 RNU6-797P-201ENST00000363101 109 ntBASIC-2.09□□□□□ -2.74
CCDC112Q8NEF3 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.09□□□□□ -2.74
CCDC112Q8NEF3 RNU6-656P-201ENST00000516785 107 ntBASIC-2.09□□□□□ -2.74
CCDC112Q8NEF3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.09□□□□□ -2.74
CCDC112Q8NEF3 U2.7-201ENST00000619197 100 ntBASIC-2.1□□□□□ -2.75
CCDC112Q8NEF3 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.11□□□□□ -2.75
CCDC112Q8NEF3 RNU6-804P-201ENST00000384286 107 ntBASIC-2.11□□□□□ -2.75
CCDC112Q8NEF3 RNU6-887P-201ENST00000410660 100 ntBASIC-2.11□□□□□ -2.75
CCDC112Q8NEF3 RNU6-412P-201ENST00000516434 106 ntBASIC-2.11□□□□□ -2.75
CCDC112Q8NEF3 RNU6-340P-201ENST00000364005 107 ntBASIC-2.12□□□□□ -2.75
CCDC112Q8NEF3 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.12□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms