Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RNU6-109P-201ENST00000516364 107 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 RNU6-184P-201ENST00000516514 107 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 MIR6509-201ENST00000614603 85 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 U7.3-201ENST00000616123 62 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 MIR203A-201ENST00000384836 110 ntBASIC-0.84□□□□□ -2.54
SKA3Q8IX90 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.84□□□□□ -2.54
SKA3Q8IX90 RNU6-274P-201ENST00000459566 107 ntBASIC-0.84□□□□□ -2.54
SKA3Q8IX90 RNA5SP147-201ENST00000516493 109 ntBASIC-0.84□□□□□ -2.54
SKA3Q8IX90 RNU6-81P-201ENST00000365608 104 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 MIR1236-201ENST00000408340 102 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 RNU6-721P-201ENST00000410155 105 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 RNU6-881P-201ENST00000516813 102 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 U6.81-201ENST00000612550 106 ntBASIC-0.85□□□□□ -2.55
SKA3Q8IX90 SNORA2.1-201ENST00000363089 137 ntBASIC-0.86□□□□□ -2.55
SKA3Q8IX90 RNU6-260P-201ENST00000384092 107 ntBASIC-0.86□□□□□ -2.55
SKA3Q8IX90 RNU6-905P-201ENST00000384434 107 ntBASIC-0.86□□□□□ -2.55
SKA3Q8IX90 RNU6-35P-201ENST00000384530 107 ntBASIC-0.86□□□□□ -2.55
SKA3Q8IX90 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.86□□□□□ -2.55
SKA3Q8IX90 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 MIR548M-201ENST00000408260 86 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 AP000533.3-201ENST00000447704 118 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 AL691482.2-201ENST00000457453 84 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 AC022137.1-201ENST00000483735 151 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 RNU6-589P-201ENST00000516485 107 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 MIR3657-201ENST00000584818 117 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 AC090617.8-201ENST00000623339 167 ntBASIC-0.87□□□□□ -2.55
SKA3Q8IX90 RNU6-766P-201ENST00000362478 107 ntBASIC-0.88□□□□□ -2.55
SKA3Q8IX90 SNORD74.6-201ENST00000364796 70 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 SNORA33.1-201ENST00000364957 130 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 MIR517B-201ENST00000385102 67 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 RNU6-758P-201ENST00000516292 89 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 YWHAEP3-201ENST00000582767 121 ntBASIC-0.89□□□□□ -2.55
SKA3Q8IX90 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.89□□□□□ -2.55
SKA3Q8IX90 RNU6-834P-201ENST00000362367 110 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 SNORA62.4-201ENST00000365504 151 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 AC108676.2-201ENST00000605225 163 ntBASIC-0.9□□□□□ -2.55
SKA3Q8IX90 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 SNORD95.1-201ENST00000364099 68 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 RNU6-22P-201ENST00000384355 107 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 MIR224-201ENST00000384889 81 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 Z95118.1-201ENST00000421372 247 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 RNU7-153P-201ENST00000516455 62 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 AL353803.5-201ENST00000599815 141 ntBASIC-0.91□□□□□ -2.56
SKA3Q8IX90 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.92□□□□□ -2.56
SKA3Q8IX90 SNORD115-27-201ENST00000364430 82 ntBASIC-0.92□□□□□ -2.56
SKA3Q8IX90 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.92□□□□□ -2.56
SKA3Q8IX90 AL450471.1-201ENST00000447509 127 ntBASIC-0.92□□□□□ -2.56
SKA3Q8IX90 RNU6-208P-201ENST00000362431 107 ntBASIC-0.93□□□□□ -2.56
SKA3Q8IX90 RNU6-158P-201ENST00000517104 100 ntBASIC-0.93□□□□□ -2.56
SKA3Q8IX90 MIR124-2-201ENST00000385081 109 ntBASIC-0.94□□□□□ -2.56
SKA3Q8IX90 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.94□□□□□ -2.56
SKA3Q8IX90 MIR1265-201ENST00000408444 86 ntBASIC-0.94□□□□□ -2.56
SKA3Q8IX90 SNORD18.2-201ENST00000459604 70 ntBASIC-0.94□□□□□ -2.56
SKA3Q8IX90 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.94□□□□□ -2.56
SKA3Q8IX90 MIR519C-201ENST00000385053 87 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 MT-TQ-201ENST00000387372 72 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 MIR1255B2-201ENST00000408618 67 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 RNU4-63P-201ENST00000411313 118 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 MTATP8P2-201ENST00000435212 202 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 RNU6-313P-201ENST00000516317 112 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 RNU6-752P-201ENST00000516376 102 ntBASIC-0.95□□□□□ -2.56
SKA3Q8IX90 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.96□□□□□ -2.56
SKA3Q8IX90 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.96□□□□□ -2.56
SKA3Q8IX90 AL031737.1-201ENST00000450125 223 ntBASIC-0.96□□□□□ -2.56
SKA3Q8IX90 RNU6-479P-201ENST00000516348 105 ntBASIC-0.96□□□□□ -2.56
SKA3Q8IX90 RNA5SP395-201ENST00000516567 118 ntBASIC-0.96□□□□□ -2.56
SKA3Q8IX90 MIR450A1-201ENST00000362262 91 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 RNY1P7-201ENST00000384743 110 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 RNA5SP25-201ENST00000410815 110 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 RNA5SP470-201ENST00000516463 106 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 MIR3681-201ENST00000580089 72 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 MIR4464-201ENST00000580818 92 ntBASIC-0.97□□□□□ -2.56
SKA3Q8IX90 SNORD77.2-201ENST00000391045 68 ntBASIC-0.98□□□□□ -2.57
SKA3Q8IX90 MIR2052-201ENST00000636055 55 ntBASIC-0.98□□□□□ -2.57
SKA3Q8IX90 CYP3A54P-201ENST00000566950 75 ntBASIC-0.99□□□□□ -2.57
SKA3Q8IX90 MIR4668-201ENST00000582284 70 ntBASIC-0.99□□□□□ -2.57
SKA3Q8IX90 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
SKA3Q8IX90 SNORD114-25-201ENST00000363742 72 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 SNORD115-37-201ENST00000363768 82 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 RNU6-340P-201ENST00000364005 107 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 MIR521-2-201ENST00000384818 87 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1□□□□□ -2.57
SKA3Q8IX90 RNU6-1246P-201ENST00000391064 107 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 AC132825.6-201ENST00000638861 357 ntBASIC-1□□□□□ -2.57
SKA3Q8IX90 RNU6-681P-201ENST00000364012 104 ntBASIC-1.01□□□□□ -2.57
SKA3Q8IX90 RNA5SP368-201ENST00000364298 116 ntBASIC-1.01□□□□□ -2.57
SKA3Q8IX90 MIR196A1-201ENST00000388006 70 ntBASIC-1.01□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms