Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MIR4752-201ENST00000579672 72 ntBASIC0.69□□□□□ -2.3
VRK3Q8IV63 AL109933.3-201ENST00000619095 188 ntBASIC0.69□□□□□ -2.3
VRK3Q8IV63 AC092634.7-201ENST00000621022 103 ntBASIC0.69□□□□□ -2.3
VRK3Q8IV63 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
VRK3Q8IV63 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
VRK3Q8IV63 SNORA36.2-201ENST00000384004 127 ntBASIC0.68□□□□□ -2.3
VRK3Q8IV63 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
VRK3Q8IV63 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
VRK3Q8IV63 RNU6-848P-201ENST00000515948 107 ntBASIC0.68□□□□□ -2.3
VRK3Q8IV63 RNU6-617P-201ENST00000516147 107 ntBASIC0.68□□□□□ -2.3
VRK3Q8IV63 RNU6-473P-201ENST00000516164 107 ntBASIC0.68□□□□□ -2.3
VRK3Q8IV63 RNU6-1049P-201ENST00000516414 107 ntBASIC0.68□□□□□ -2.3
VRK3Q8IV63 RNA5SP147-201ENST00000516493 109 ntBASIC0.68□□□□□ -2.3
VRK3Q8IV63 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.68□□□□□ -2.3
VRK3Q8IV63 MIR582-201ENST00000365731 98 ntBASIC0.67□□□□□ -2.3
VRK3Q8IV63 SNORA40.8-201ENST00000411034 126 ntBASIC0.67□□□□□ -2.3
VRK3Q8IV63 MIR4653-201ENST00000585107 83 ntBASIC0.67□□□□□ -2.3
VRK3Q8IV63 Y_RNA.125-201ENST00000363371 111 ntBASIC0.66□□□□□ -2.3
VRK3Q8IV63 RNA5SP325-201ENST00000363756 130 ntBASIC0.66□□□□□ -2.3
VRK3Q8IV63 RNU6-669P-201ENST00000365575 107 ntBASIC0.66□□□□□ -2.3
VRK3Q8IV63 SNORA15B-2-201ENST00000384058 135 ntBASIC0.66□□□□□ -2.3
VRK3Q8IV63 SNORA15B-1-201ENST00000384334 135 ntBASIC0.66□□□□□ -2.3
VRK3Q8IV63 RNU6-1162P-201ENST00000384443 104 ntBASIC0.66□□□□□ -2.3
VRK3Q8IV63 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
VRK3Q8IV63 RNU6-542P-201ENST00000516405 103 ntBASIC0.66□□□□□ -2.3
VRK3Q8IV63 MIR4473-201ENST00000583731 91 ntBASIC0.66□□□□□ -2.3
VRK3Q8IV63 uc_338.10-201ENST00000621872 182 ntBASIC0.66□□□□□ -2.3
VRK3Q8IV63 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.65□□□□□ -2.31
VRK3Q8IV63 RNA5SP215-201ENST00000363440 122 ntBASIC0.65□□□□□ -2.31
VRK3Q8IV63 MIR518A1-201ENST00000385068 85 ntBASIC0.65□□□□□ -2.31
VRK3Q8IV63 MIR548E-201ENST00000408287 88 ntBASIC0.65□□□□□ -2.31
VRK3Q8IV63 AC110620.1-201ENST00000416042 228 ntBASIC0.65□□□□□ -2.31
VRK3Q8IV63 PSMC1P5-201ENST00000512850 177 ntBASIC0.65□□□□□ -2.31
VRK3Q8IV63 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.31
VRK3Q8IV63 SNORA63.6-201ENST00000364921 119 ntBASIC0.64□□□□□ -2.31
VRK3Q8IV63 MIR216A-201ENST00000385063 110 ntBASIC0.64□□□□□ -2.31
VRK3Q8IV63 snoU13.13-201ENST00000458842 104 ntBASIC0.64□□□□□ -2.31
VRK3Q8IV63 RNU6-1089P-201ENST00000516473 104 ntBASIC0.64□□□□□ -2.31
VRK3Q8IV63 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
VRK3Q8IV63 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
VRK3Q8IV63 SNORA25.18-201ENST00000607153 114 ntBASIC0.64□□□□□ -2.31
VRK3Q8IV63 MIR9-2-201ENST00000384838 87 ntBASIC0.63□□□□□ -2.31
VRK3Q8IV63 AC098934.3-201ENST00000430450 190 ntBASIC0.63□□□□□ -2.31
VRK3Q8IV63 AC021146.9-201ENST00000512503 156 ntBASIC0.63□□□□□ -2.31
VRK3Q8IV63 RN7SL793P-201ENST00000583259 296 ntBASIC0.63□□□□□ -2.31
VRK3Q8IV63 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
VRK3Q8IV63 SNORA2A-201ENST00000383885 135 ntBASIC0.62□□□□□ -2.31
VRK3Q8IV63 AC244090.1-201ENST00000441884 93 ntBASIC0.62□□□□□ -2.31
VRK3Q8IV63 U7.6-201ENST00000610841 64 ntBASIC0.62□□□□□ -2.31
VRK3Q8IV63 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
VRK3Q8IV63 AL157398.1-201ENST00000452981 186 ntBASIC0.61□□□□□ -2.31
VRK3Q8IV63 RNU6-1232P-201ENST00000516299 86 ntBASIC0.61□□□□□ -2.31
VRK3Q8IV63 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
VRK3Q8IV63 MIR20A-201ENST00000362279 71 ntBASIC0.6□□□□□ -2.31
VRK3Q8IV63 SNORD71-201ENST00000411292 86 ntBASIC0.6□□□□□ -2.31
VRK3Q8IV63 MIR6755-201ENST00000619993 66 ntBASIC0.6□□□□□ -2.31
VRK3Q8IV63 SNORA33.1-201ENST00000364957 130 ntBASIC0.59□□□□□ -2.31
VRK3Q8IV63 RNU6-863P-201ENST00000515989 104 ntBASIC0.59□□□□□ -2.31
VRK3Q8IV63 SCARNA21.1-201ENST00000515996 128 ntBASIC0.59□□□□□ -2.31
VRK3Q8IV63 RNU6-229P-201ENST00000516614 102 ntBASIC0.59□□□□□ -2.31
VRK3Q8IV63 U2.7-201ENST00000619197 100 ntBASIC0.59□□□□□ -2.31
VRK3Q8IV63 Y_RNA.423-201ENST00000384057 113 ntBASIC0.58□□□□□ -2.32
VRK3Q8IV63 RNA5SP299-201ENST00000391203 116 ntBASIC0.58□□□□□ -2.32
VRK3Q8IV63 MIR548AD-201ENST00000584780 82 ntBASIC0.58□□□□□ -2.32
VRK3Q8IV63 RNA5SP499-201ENST00000363982 119 ntBASIC0.57□□□□□ -2.32
VRK3Q8IV63 MIR516B1-201ENST00000385211 90 ntBASIC0.57□□□□□ -2.32
VRK3Q8IV63 MIR501-201ENST00000390204 84 ntBASIC0.57□□□□□ -2.32
VRK3Q8IV63 MIR4677-201ENST00000584153 80 ntBASIC0.57□□□□□ -2.32
VRK3Q8IV63 MIR6513-201ENST00000621188 64 ntBASIC0.57□□□□□ -2.32
VRK3Q8IV63 SNORD114-29-201ENST00000364819 70 ntBASIC0.56□□□□□ -2.32
VRK3Q8IV63 RNU7-174P-201ENST00000516248 59 ntBASIC0.56□□□□□ -2.32
VRK3Q8IV63 SNORD44.1-201ENST00000363202 61 ntBASIC0.55□□□□□ -2.32
VRK3Q8IV63 SNORA25.5-201ENST00000363782 126 ntBASIC0.55□□□□□ -2.32
VRK3Q8IV63 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
VRK3Q8IV63 SNORD2-201ENST00000459163 69 ntBASIC0.55□□□□□ -2.32
VRK3Q8IV63 RNU6-175P-201ENST00000516896 107 ntBASIC0.55□□□□□ -2.32
VRK3Q8IV63 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
VRK3Q8IV63 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
VRK3Q8IV63 RNU6-698P-201ENST00000363523 107 ntBASIC0.54□□□□□ -2.32
VRK3Q8IV63 RNU6-34P-201ENST00000364874 107 ntBASIC0.54□□□□□ -2.32
VRK3Q8IV63 RNU6-302P-201ENST00000365249 107 ntBASIC0.54□□□□□ -2.32
VRK3Q8IV63 RNU6-499P-201ENST00000365615 107 ntBASIC0.54□□□□□ -2.32
VRK3Q8IV63 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
VRK3Q8IV63 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
VRK3Q8IV63 MIR193B-201ENST00000384907 83 ntBASIC0.53□□□□□ -2.32
VRK3Q8IV63 MIR517B-201ENST00000385102 67 ntBASIC0.53□□□□□ -2.32
VRK3Q8IV63 SNORA49-201ENST00000386157 136 ntBASIC0.53□□□□□ -2.32
VRK3Q8IV63 MIR936-201ENST00000401264 98 ntBASIC0.53□□□□□ -2.32
VRK3Q8IV63 RNU7-188P-201ENST00000517063 64 ntBASIC0.53□□□□□ -2.32
VRK3Q8IV63 CYP3A54P-201ENST00000566950 75 ntBASIC0.53□□□□□ -2.32
VRK3Q8IV63 RNA5SP128-201ENST00000365305 116 ntBASIC0.52□□□□□ -2.33
VRK3Q8IV63 RNU6-945P-201ENST00000383947 107 ntBASIC0.52□□□□□ -2.33
VRK3Q8IV63 MIR876-201ENST00000401147 81 ntBASIC0.52□□□□□ -2.33
VRK3Q8IV63 MIR548V-201ENST00000584165 80 ntBASIC0.52□□□□□ -2.33
VRK3Q8IV63 RNU6-92P-201ENST00000605893 104 ntBASIC0.52□□□□□ -2.33
VRK3Q8IV63 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
VRK3Q8IV63 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
VRK3Q8IV63 AC090617.8-201ENST00000623339 167 ntBASIC0.52□□□□□ -2.33
VRK3Q8IV63 SNORD114-23-201ENST00000363536 72 ntBASIC0.51□□□□□ -2.33
VRK3Q8IV63 MIR760-201ENST00000390220 80 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms