Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.88□□□□□ -2.71
CSPG4Q6UVK1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.88□□□□□ -2.71
CSPG4Q6UVK1 RNU6-645P-201ENST00000364649 106 ntBASIC-1.88□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.88□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.88□□□□□ -2.71
CSPG4Q6UVK1 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.88□□□□□ -2.71
CSPG4Q6UVK1 SNORD116-2-201ENST00000384274 95 ntBASIC-1.89□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.89□□□□□ -2.71
CSPG4Q6UVK1 MIR630-201ENST00000384957 97 ntBASIC-1.89□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.89□□□□□ -2.71
CSPG4Q6UVK1 RPS29P30-201ENST00000600975 111 ntBASIC-1.89□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.89□□□□□ -2.71
CSPG4Q6UVK1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.89□□□□□ -2.71
CSPG4Q6UVK1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.89□□□□□ -2.71
CSPG4Q6UVK1 MIR6844-201ENST00000637122 62 ntBASIC-1.89□□□□□ -2.71
CSPG4Q6UVK1 MIR581-201ENST00000384895 96 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 RNU6-493P-201ENST00000391321 108 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 RNU7-152P-201ENST00000458982 64 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 U6.81-201ENST00000612550 106 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 AC090582.1-201ENST00000636321 199 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 AC104996.3-201ENST00000590718 94 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 AL603755.1-201ENST00000619504 163 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 AL160413.1-201ENST00000622780 310 ntBASIC-1.9□□□□□ -2.71
CSPG4Q6UVK1 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.91□□□□□ -2.71
CSPG4Q6UVK1 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.91□□□□□ -2.71
CSPG4Q6UVK1 MIR559-201ENST00000385188 96 ntBASIC-1.91□□□□□ -2.71
CSPG4Q6UVK1 RNU6-816P-201ENST00000390914 107 ntBASIC-1.91□□□□□ -2.71
CSPG4Q6UVK1 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.91□□□□□ -2.71
CSPG4Q6UVK1 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.91□□□□□ -2.71
CSPG4Q6UVK1 RNU4-14P-201ENST00000410858 122 ntBASIC-1.91□□□□□ -2.71
CSPG4Q6UVK1 Y_RNA.797-201ENST00000515977 94 ntBASIC-1.91□□□□□ -2.71
CSPG4Q6UVK1 MIR4796-201ENST00000580742 81 ntBASIC-1.91□□□□□ -2.71
CSPG4Q6UVK1 RNU6-834P-201ENST00000362367 110 ntBASIC-1.91□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.91□□□□□ -2.72
CSPG4Q6UVK1 SNORD63.2-201ENST00000516303 64 ntBASIC-1.91□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.91□□□□□ -2.72
CSPG4Q6UVK1 AC012531.4-201ENST00000616509 177 ntBASIC-1.91□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.92□□□□□ -2.72
CSPG4Q6UVK1 SNORD45B-201ENST00000364617 72 ntBASIC-1.92□□□□□ -2.72
CSPG4Q6UVK1 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.92□□□□□ -2.72
CSPG4Q6UVK1 SNORD90-201ENST00000391145 111 ntBASIC-1.92□□□□□ -2.72
CSPG4Q6UVK1 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.92□□□□□ -2.72
CSPG4Q6UVK1 RNU6-912P-201ENST00000363800 104 ntBASIC-1.92□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.92□□□□□ -2.72
CSPG4Q6UVK1 MIR548C-201ENST00000384815 97 ntBASIC-1.92□□□□□ -2.72
CSPG4Q6UVK1 RNY3P8-201ENST00000411366 126 ntBASIC-1.92□□□□□ -2.72
CSPG4Q6UVK1 MTND5P22-201ENST00000458380 195 ntBASIC-1.92□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.93□□□□□ -2.72
CSPG4Q6UVK1 RNU6-770P-201ENST00000363929 105 ntBASIC-1.93□□□□□ -2.72
CSPG4Q6UVK1 RNU6-669P-201ENST00000365575 107 ntBASIC-1.93□□□□□ -2.72
CSPG4Q6UVK1 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.93□□□□□ -2.72
CSPG4Q6UVK1 MTND1P19-201ENST00000511780 315 ntBASIC-1.93□□□□□ -2.72
CSPG4Q6UVK1 RNU6-523P-201ENST00000516304 54 ntBASIC-1.93□□□□□ -2.72
CSPG4Q6UVK1 RNU6-310P-201ENST00000384655 107 ntBASIC-1.94□□□□□ -2.72
CSPG4Q6UVK1 RNU6-982P-201ENST00000516216 102 ntBASIC-1.94□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.94□□□□□ -2.72
CSPG4Q6UVK1 MIR4439-201ENST00000583746 80 ntBASIC-1.94□□□□□ -2.72
CSPG4Q6UVK1 RNY3P2-201ENST00000362918 102 ntBASIC-1.94□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.94□□□□□ -2.72
CSPG4Q6UVK1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.94□□□□□ -2.72
CSPG4Q6UVK1 MIR125B1-201ENST00000385236 88 ntBASIC-1.94□□□□□ -2.72
CSPG4Q6UVK1 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 RNY4P25-201ENST00000459254 96 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 RNY3P15-201ENST00000516297 97 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 SNORD116.3-201ENST00000517176 78 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 MIR3144-201ENST00000579460 79 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 MIR620-201ENST00000385232 95 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 SNORD113-2-201ENST00000391082 72 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 SNORA75.5-201ENST00000391291 81 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.95□□□□□ -2.72
CSPG4Q6UVK1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.96□□□□□ -2.72
CSPG4Q6UVK1 RNU6-974P-201ENST00000384099 108 ntBASIC-1.96□□□□□ -2.72
CSPG4Q6UVK1 RNU6-129P-201ENST00000391022 107 ntBASIC-1.96□□□□□ -2.72
CSPG4Q6UVK1 RNU6-554P-201ENST00000410466 106 ntBASIC-1.96□□□□□ -2.72
CSPG4Q6UVK1 RNU6-956P-201ENST00000458868 103 ntBASIC-1.96□□□□□ -2.72
CSPG4Q6UVK1 AC130289.1-201ENST00000577321 73 ntBASIC-1.96□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.97□□□□□ -2.72
CSPG4Q6UVK1 SNORA27.2-201ENST00000363365 126 ntBASIC-1.97□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.97□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.97□□□□□ -2.72
CSPG4Q6UVK1 Y_RNA.434-201ENST00000384090 100 ntBASIC-1.97□□□□□ -2.72
CSPG4Q6UVK1 MIR1302-6-201ENST00000408466 90 ntBASIC-1.97□□□□□ -2.72
CSPG4Q6UVK1 MIR4694-201ENST00000578534 80 ntBASIC-1.97□□□□□ -2.72
CSPG4Q6UVK1 AC002553.4-201ENST00000616896 331 ntBASIC-1.97□□□□□ -2.72
CSPG4Q6UVK1 SNORD116-10-201ENST00000363791 102 ntBASIC-1.97□□□□□ -2.73
CSPG4Q6UVK1 RNU6-644P-201ENST00000391155 98 ntBASIC-1.97□□□□□ -2.73
CSPG4Q6UVK1 RNU6-587P-201ENST00000391282 106 ntBASIC-1.97□□□□□ -2.73
CSPG4Q6UVK1 RNU6-361P-201ENST00000364454 107 ntBASIC-1.98□□□□□ -2.73
CSPG4Q6UVK1 SNORD60-201ENST00000383903 83 ntBASIC-1.98□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.98□□□□□ -2.73
CSPG4Q6UVK1 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.98□□□□□ -2.73
CSPG4Q6UVK1 MIR3675-201ENST00000583661 73 ntBASIC-1.98□□□□□ -2.73
CSPG4Q6UVK1 AC103810.7-201ENST00000607821 91 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms