Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 RNU4-32P-201ENST00000363404 141 ntBASIC-0.86□□□□□ -2.55
RPUSD3Q6P087 SNORD115-33-201ENST00000363723 82 ntBASIC-0.86□□□□□ -2.55
RPUSD3Q6P087 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.86□□□□□ -2.55
RPUSD3Q6P087 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.86□□□□□ -2.55
RPUSD3Q6P087 MIR487B-201ENST00000385021 84 ntBASIC-0.86□□□□□ -2.55
RPUSD3Q6P087 RNU6-772P-201ENST00000516042 105 ntBASIC-0.86□□□□□ -2.55
RPUSD3Q6P087 MIR4320-201ENST00000636981 65 ntBASIC-0.86□□□□□ -2.55
RPUSD3Q6P087 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.86□□□□□ -2.55
RPUSD3Q6P087 RNU6-704P-201ENST00000364162 103 ntBASIC-0.87□□□□□ -2.55
RPUSD3Q6P087 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.87□□□□□ -2.55
RPUSD3Q6P087 MIR1255B2-201ENST00000408618 67 ntBASIC-0.87□□□□□ -2.55
RPUSD3Q6P087 HLA-S-202ENST00000425174 53 ntBASIC-0.87□□□□□ -2.55
RPUSD3Q6P087 RNU7-24P-201ENST00000458867 62 ntBASIC-0.87□□□□□ -2.55
RPUSD3Q6P087 FGF7P7-201ENST00000514120 227 ntBASIC-0.87□□□□□ -2.55
RPUSD3Q6P087 SNORA63.2-201ENST00000362603 126 ntBASIC-0.88□□□□□ -2.55
RPUSD3Q6P087 RNU6-832P-201ENST00000363319 107 ntBASIC-0.88□□□□□ -2.55
RPUSD3Q6P087 SNORD50.2-201ENST00000365465 70 ntBASIC-0.88□□□□□ -2.55
RPUSD3Q6P087 RNA5SP272-201ENST00000516095 111 ntBASIC-0.88□□□□□ -2.55
RPUSD3Q6P087 RNU6-824P-201ENST00000363724 104 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 RNU6-164P-201ENST00000364604 103 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 RNU6-382P-201ENST00000365181 106 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 RNU6-80P-201ENST00000384195 107 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 RNA5SP292-201ENST00000390974 118 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 AC090616.4-201ENST00000448026 115 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 SNORD57-201ENST00000448188 72 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 RNU7-200P-201ENST00000516105 62 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 MIR4770-201ENST00000579149 58 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 MIR3613-201ENST00000579844 87 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 MIR3064-201ENST00000581130 66 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 U6.96-201ENST00000636425 70 ntBASIC-0.89□□□□□ -2.55
RPUSD3Q6P087 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.9□□□□□ -2.55
RPUSD3Q6P087 SNORD45B-201ENST00000364617 72 ntBASIC-0.9□□□□□ -2.55
RPUSD3Q6P087 MIR519A2-201ENST00000384990 87 ntBASIC-0.9□□□□□ -2.55
RPUSD3Q6P087 MIR548A1-201ENST00000385041 97 ntBASIC-0.9□□□□□ -2.55
RPUSD3Q6P087 RNU6-732P-201ENST00000516033 103 ntBASIC-0.9□□□□□ -2.55
RPUSD3Q6P087 MIR3165-201ENST00000579874 75 ntBASIC-0.9□□□□□ -2.55
RPUSD3Q6P087 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 RNU6-576P-201ENST00000390854 102 ntBASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 RPL35AP4-201ENST00000412007 102 ntBASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 RNA5SP180-201ENST00000516181 101 ntBASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 RNA5SP147-201ENST00000516493 109 ntBASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 CYP3A54P-201ENST00000566950 75 ntBASIC-0.91□□□□□ -2.56
RPUSD3Q6P087 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.92□□□□□ -2.56
RPUSD3Q6P087 MIR203A-201ENST00000384836 110 ntBASIC-0.92□□□□□ -2.56
RPUSD3Q6P087 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
RPUSD3Q6P087 snosnR66.1-201ENST00000391095 99 ntBASIC-0.92□□□□□ -2.56
RPUSD3Q6P087 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.92□□□□□ -2.56
RPUSD3Q6P087 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.92□□□□□ -2.56
RPUSD3Q6P087 RNU6-168P-201ENST00000516189 101 ntBASIC-0.92□□□□□ -2.56
RPUSD3Q6P087 AL513043.2-201ENST00000573941 143 ntBASIC-0.92□□□□□ -2.56
RPUSD3Q6P087 MIR3657-201ENST00000584818 117 ntBASIC-0.92□□□□□ -2.56
RPUSD3Q6P087 RNU6-79P-201ENST00000362511 107 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 MIR520D-201ENST00000385002 87 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 MIR507-201ENST00000385234 94 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 MIR548U-201ENST00000390728 81 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 RNA5SP266-201ENST00000410273 108 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 RNU7-154P-201ENST00000516194 62 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 AC104996.3-201ENST00000590718 94 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.93□□□□□ -2.56
RPUSD3Q6P087 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.94□□□□□ -2.56
RPUSD3Q6P087 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.94□□□□□ -2.56
RPUSD3Q6P087 AL353691.2-201ENST00000443795 59 ntBASIC-0.94□□□□□ -2.56
RPUSD3Q6P087 SNORD4B-201ENST00000459083 72 ntBASIC-0.94□□□□□ -2.56
RPUSD3Q6P087 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.94□□□□□ -2.56
RPUSD3Q6P087 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.94□□□□□ -2.56
RPUSD3Q6P087 U7.5-201ENST00000517224 61 ntBASIC-0.94□□□□□ -2.56
RPUSD3Q6P087 MIR1246-201ENST00000636535 73 ntBASIC-0.94□□□□□ -2.56
RPUSD3Q6P087 RNU6-228P-201ENST00000362700 106 ntBASIC-0.95□□□□□ -2.56
RPUSD3Q6P087 RNU6-924P-201ENST00000362926 108 ntBASIC-0.95□□□□□ -2.56
RPUSD3Q6P087 RNU6-608P-201ENST00000383927 104 ntBASIC-0.95□□□□□ -2.56
RPUSD3Q6P087 RNU6-260P-201ENST00000384092 107 ntBASIC-0.95□□□□□ -2.56
RPUSD3Q6P087 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.95□□□□□ -2.56
RPUSD3Q6P087 RNU6-257P-201ENST00000410238 98 ntBASIC-0.95□□□□□ -2.56
RPUSD3Q6P087 RNU4-61P-201ENST00000411243 107 ntBASIC-0.95□□□□□ -2.56
RPUSD3Q6P087 U6.95-201ENST00000636931 70 ntBASIC-0.95□□□□□ -2.56
RPUSD3Q6P087 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 RNU6-478P-201ENST00000363904 110 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 RNY1P5-201ENST00000383890 115 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 SNORA19.1-201ENST00000410656 129 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 RNU7-88P-201ENST00000458752 63 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 MIR4756-201ENST00000577874 78 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 MIR5009-201ENST00000578736 100 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 AL035470.1-201ENST00000622571 220 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 MIR5683-201ENST00000636514 76 ntBASIC-0.96□□□□□ -2.56
RPUSD3Q6P087 RNU6-644P-201ENST00000391155 98 ntBASIC-0.97□□□□□ -2.56
RPUSD3Q6P087 AC108019.1-201ENST00000512540 175 ntBASIC-0.97□□□□□ -2.56
RPUSD3Q6P087 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.97□□□□□ -2.56
RPUSD3Q6P087 MIR548Z-201ENST00000584743 97 ntBASIC-0.97□□□□□ -2.56
RPUSD3Q6P087 U6.81-201ENST00000612550 106 ntBASIC-0.97□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms