Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 MIR6773-201ENST00000612812 74 ntBASIC-0.14□□□□□ -2.43
CKAP4Q07065 MIR8064-201ENST00000612863 90 ntBASIC-0.14□□□□□ -2.43
CKAP4Q07065 MIR6515-201ENST00000619843 57 ntBASIC-0.14□□□□□ -2.43
CKAP4Q07065 AL391099.1-201ENST00000624635 187 ntBASIC-0.14□□□□□ -2.43
CKAP4Q07065 MIR548BB-201ENST00000626714 66 ntBASIC-0.14□□□□□ -2.43
CKAP4Q07065 SNORD115-25-201ENST00000362619 82 ntBASIC-0.15□□□□□ -2.43
CKAP4Q07065 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.15□□□□□ -2.43
CKAP4Q07065 MIR5704-201ENST00000584029 77 ntBASIC-0.15□□□□□ -2.43
CKAP4Q07065 MIR6851-201ENST00000617060 67 ntBASIC-0.15□□□□□ -2.43
CKAP4Q07065 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.15□□□□□ -2.43
CKAP4Q07065 MIR330-201ENST00000362196 94 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 RNU6-208P-201ENST00000362431 107 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 RNU6-478P-201ENST00000363904 110 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 RNU6-973P-201ENST00000364690 107 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 SNORA63.6-201ENST00000364921 119 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 SNORD14C-201ENST00000365382 88 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 SNORD114-12-201ENST00000365400 75 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 SNORD77.2-201ENST00000391045 68 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 AL450471.1-201ENST00000447509 127 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 MIR1273G-201ENST00000577677 100 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 MIR4432-201ENST00000581823 84 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 RN7SL793P-201ENST00000583259 296 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
CKAP4Q07065 MIR4773-1-201ENST00000637203 78 ntBASIC-0.16□□□□□ -2.44
CKAP4Q07065 RNU6-340P-201ENST00000364005 107 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 RNU6-721P-201ENST00000410155 105 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 SNORD126-201ENST00000459475 77 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 RNU6-320P-201ENST00000516511 106 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 SNORD38.3-201ENST00000516599 73 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 RNU6-881P-201ENST00000516813 102 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 RNU6-557P-201ENST00000516842 110 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 AP000676.1-201ENST00000533307 52 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 MIR5190-201ENST00000581537 80 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 YWHAEP3-201ENST00000582767 121 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 MIR3657-201ENST00000584818 117 ntBASIC-0.17□□□□□ -2.44
CKAP4Q07065 RNU6-330P-201ENST00000363015 107 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 RNA5SP275-201ENST00000363936 118 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 SNORA33.1-201ENST00000364957 130 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 RNU6-260P-201ENST00000384092 107 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
CKAP4Q07065 MIR1287-201ENST00000408492 90 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.18□□□□□ -2.44
CKAP4Q07065 RNU6-274P-201ENST00000459566 107 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 MIR8087-201ENST00000612745 78 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 MIR6888-201ENST00000621977 67 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 MIR6739-201ENST00000622461 75 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 AC006160.2-201ENST00000637708 154 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 MIR4788-201ENST00000639104 80 ntBASIC-0.18□□□□□ -2.44
CKAP4Q07065 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 RNY4P30-201ENST00000410216 95 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 AC074348.1-201ENST00000426503 132 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 RNU6-752P-201ENST00000516376 102 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 RNU6-656P-201ENST00000516785 107 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 RNA5SP66-201ENST00000517178 101 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 MIR3681-201ENST00000580089 72 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.19□□□□□ -2.44
CKAP4Q07065 SNORD114-14-201ENST00000362723 75 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 SNORA2.1-201ENST00000363089 137 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 RNU6-681P-201ENST00000364012 104 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 RNU6-787P-201ENST00000384032 107 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 MIR203A-201ENST00000384836 110 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 MIR7-2-201ENST00000384970 110 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 RNU6-284P-201ENST00000411105 106 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 AL691482.2-201ENST00000457453 84 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 MIR6509-201ENST00000614603 85 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 AL445584.3-201ENST00000617173 78 ntBASIC-0.2□□□□□ -2.44
CKAP4Q07065 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.21□□□□□ -2.44
CKAP4Q07065 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.21□□□□□ -2.44
CKAP4Q07065 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.21□□□□□ -2.44
CKAP4Q07065 RNU6-979P-201ENST00000383896 107 ntBASIC-0.21□□□□□ -2.44
CKAP4Q07065 SNORA32.3-201ENST00000384772 121 ntBASIC-0.21□□□□□ -2.44
CKAP4Q07065 MIR521-2-201ENST00000384818 87 ntBASIC-0.21□□□□□ -2.44
CKAP4Q07065 RPS29P8-201ENST00000445109 171 ntBASIC-0.21□□□□□ -2.44
CKAP4Q07065 AC021146.9-201ENST00000512503 156 ntBASIC-0.21□□□□□ -2.44
CKAP4Q07065 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.21□□□□□ -2.44
CKAP4Q07065 uc_338.36-201ENST00000622331 158 ntBASIC-0.21□□□□□ -2.44
CKAP4Q07065 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 RNU6-431P-201ENST00000383874 107 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 RNU6-246P-201ENST00000384702 107 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 MIR519A2-201ENST00000384990 87 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 RNA5SP147-201ENST00000516493 109 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 IGLVI-20-201ENST00000519296 130 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 CYP3A54P-201ENST00000566950 75 ntBASIC-0.22□□□□□ -2.44
CKAP4Q07065 MIR4263-201ENST00000584745 83 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms