Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 Y_RNA.325-201ENST00000365171 122 ntBASIC1.23□□□□□ -2.21
NFKB2Q00653 MIR644A-201ENST00000385262 94 ntBASIC1.23□□□□□ -2.21
NFKB2Q00653 SNORD116.2-201ENST00000391251 93 ntBASIC1.23□□□□□ -2.21
NFKB2Q00653 MIR548L-201ENST00000408303 86 ntBASIC1.23□□□□□ -2.21
NFKB2Q00653 RNA5SP255-201ENST00000516370 107 ntBASIC1.23□□□□□ -2.21
NFKB2Q00653 RNU5B-6P-201ENST00000516765 68 ntBASIC1.23□□□□□ -2.21
NFKB2Q00653 MIR548X-201ENST00000580069 75 ntBASIC1.23□□□□□ -2.21
NFKB2Q00653 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.23□□□□□ -2.21
NFKB2Q00653 SNORD28-201ENST00000384706 75 ntBASIC1.22□□□□□ -2.21
NFKB2Q00653 AC025627.3-201ENST00000582078 182 ntBASIC1.22□□□□□ -2.21
NFKB2Q00653 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NFKB2Q00653 SNORA9.1-201ENST00000362412 131 ntBASIC1.21□□□□□ -2.22
NFKB2Q00653 RNU6-726P-201ENST00000364680 107 ntBASIC1.21□□□□□ -2.22
NFKB2Q00653 SNORA63.6-201ENST00000364921 119 ntBASIC1.21□□□□□ -2.22
NFKB2Q00653 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
NFKB2Q00653 AC002350.1-201ENST00000490759 375 ntBASIC1.21□□□□□ -2.22
NFKB2Q00653 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
NFKB2Q00653 RNU6-838P-201ENST00000363399 108 ntBASIC1.2□□□□□ -2.22
NFKB2Q00653 SNORD116-16-201ENST00000384533 92 ntBASIC1.2□□□□□ -2.22
NFKB2Q00653 MIR545-201ENST00000385085 106 ntBASIC1.2□□□□□ -2.22
NFKB2Q00653 RNU6-1246P-201ENST00000391064 107 ntBASIC1.2□□□□□ -2.22
NFKB2Q00653 RNU6-469P-201ENST00000516253 101 ntBASIC1.2□□□□□ -2.22
NFKB2Q00653 MIR7110-201ENST00000612638 86 ntBASIC1.2□□□□□ -2.22
NFKB2Q00653 Y_RNA.178-201ENST00000363832 102 ntBASIC1.19□□□□□ -2.22
NFKB2Q00653 SNORA8.2-201ENST00000384372 139 ntBASIC1.19□□□□□ -2.22
NFKB2Q00653 RNU6-269P-201ENST00000391077 97 ntBASIC1.19□□□□□ -2.22
NFKB2Q00653 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.19□□□□□ -2.22
NFKB2Q00653 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
NFKB2Q00653 RNU6-716P-201ENST00000365621 103 ntBASIC1.18□□□□□ -2.22
NFKB2Q00653 RNA5SP484-201ENST00000458857 111 ntBASIC1.18□□□□□ -2.22
NFKB2Q00653 SCARNA17.3-201ENST00000516381 125 ntBASIC1.18□□□□□ -2.22
NFKB2Q00653 RN7SL793P-201ENST00000583259 296 ntBASIC1.18□□□□□ -2.22
NFKB2Q00653 Y_RNA.74-201ENST00000362911 99 ntBASIC1.17□□□□□ -2.22
NFKB2Q00653 SNORD18A-201ENST00000363753 72 ntBASIC1.17□□□□□ -2.22
NFKB2Q00653 SNORA40B-201ENST00000385573 128 ntBASIC1.17□□□□□ -2.22
NFKB2Q00653 RNA5SP47-201ENST00000517230 109 ntBASIC1.17□□□□□ -2.22
NFKB2Q00653 SNORD105-201ENST00000386910 85 ntBASIC1.16□□□□□ -2.22
NFKB2Q00653 AL021921.1-201ENST00000442774 93 ntBASIC1.16□□□□□ -2.22
NFKB2Q00653 CYP3A54P-201ENST00000566950 75 ntBASIC1.16□□□□□ -2.22
NFKB2Q00653 Y_RNA.407-201ENST00000383986 113 ntBASIC1.15□□□□□ -2.23
NFKB2Q00653 MIR216A-201ENST00000385063 110 ntBASIC1.15□□□□□ -2.23
NFKB2Q00653 MIR652-201ENST00000385278 98 ntBASIC1.15□□□□□ -2.23
NFKB2Q00653 MIR548E-201ENST00000408287 88 ntBASIC1.15□□□□□ -2.23
NFKB2Q00653 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.15□□□□□ -2.23
NFKB2Q00653 RNU6-810P-201ENST00000364001 107 ntBASIC1.14□□□□□ -2.23
NFKB2Q00653 MIR582-201ENST00000365731 98 ntBASIC1.14□□□□□ -2.23
NFKB2Q00653 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.14□□□□□ -2.23
NFKB2Q00653 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
NFKB2Q00653 RNU6-518P-201ENST00000516056 96 ntBASIC1.14□□□□□ -2.23
NFKB2Q00653 RNU6-247P-201ENST00000362636 107 ntBASIC1.13□□□□□ -2.23
NFKB2Q00653 Y_RNA.282-201ENST00000364793 102 ntBASIC1.13□□□□□ -2.23
NFKB2Q00653 MIR527-201ENST00000385244 85 ntBASIC1.13□□□□□ -2.23
NFKB2Q00653 U6.96-201ENST00000636425 70 ntBASIC1.13□□□□□ -2.23
NFKB2Q00653 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NFKB2Q00653 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
NFKB2Q00653 SCARNA16.5-201ENST00000517114 183 ntBASIC1.12□□□□□ -2.23
NFKB2Q00653 AL162376.1-201ENST00000624117 175 ntBASIC1.12□□□□□ -2.23
NFKB2Q00653 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.12□□□□□ -2.23
NFKB2Q00653 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
NFKB2Q00653 RNU6-246P-201ENST00000384702 107 ntBASIC1.11□□□□□ -2.23
NFKB2Q00653 RNU6-172P-201ENST00000411000 93 ntBASIC1.11□□□□□ -2.23
NFKB2Q00653 RNU6-419P-201ENST00000517030 63 ntBASIC1.11□□□□□ -2.23
NFKB2Q00653 MIR5000-201ENST00000577717 103 ntBASIC1.11□□□□□ -2.23
NFKB2Q00653 MIR3678-201ENST00000578455 94 ntBASIC1.11□□□□□ -2.23
NFKB2Q00653 MIR548AE1-201ENST00000583292 70 ntBASIC1.11□□□□□ -2.23
NFKB2Q00653 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
NFKB2Q00653 SNORD1B-201ENST00000363091 84 ntBASIC1.1□□□□□ -2.23
NFKB2Q00653 MIR516B1-201ENST00000385211 90 ntBASIC1.1□□□□□ -2.23
NFKB2Q00653 RNU6-1250P-201ENST00000391218 107 ntBASIC1.1□□□□□ -2.23
NFKB2Q00653 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
NFKB2Q00653 AL353765.1-201ENST00000605514 183 ntBASIC1.1□□□□□ -2.23
NFKB2Q00653 AC090617.8-201ENST00000623339 167 ntBASIC1.1□□□□□ -2.23
NFKB2Q00653 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
NFKB2Q00653 MIR608-201ENST00000384820 100 ntBASIC1.09□□□□□ -2.23
NFKB2Q00653 MIR519A2-201ENST00000384990 87 ntBASIC1.09□□□□□ -2.23
NFKB2Q00653 SNORD99-201ENST00000408612 74 ntBASIC1.09□□□□□ -2.23
NFKB2Q00653 MIR4490-201ENST00000582647 84 ntBASIC1.09□□□□□ -2.23
NFKB2Q00653 MIR4473-201ENST00000583731 91 ntBASIC1.09□□□□□ -2.23
NFKB2Q00653 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
NFKB2Q00653 AC243829.6-201ENST00000612652 106 ntBASIC1.08□□□□□ -2.24
NFKB2Q00653 AC243829.3-201ENST00000622177 108 ntBASIC1.08□□□□□ -2.24
NFKB2Q00653 MIR6828-201ENST00000636181 60 ntBASIC1.08□□□□□ -2.24
NFKB2Q00653 MIR1255B2-201ENST00000408618 67 ntBASIC1.07□□□□□ -2.24
NFKB2Q00653 AC006210.1-201ENST00000424882 111 ntBASIC1.07□□□□□ -2.24
NFKB2Q00653 ACA64.5-201ENST00000516207 127 ntBASIC1.07□□□□□ -2.24
NFKB2Q00653 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.07□□□□□ -2.24
NFKB2Q00653 RNU6-724P-201ENST00000390958 105 ntBASIC1.06□□□□□ -2.24
NFKB2Q00653 SNORD110-201ENST00000408189 75 ntBASIC1.06□□□□□ -2.24
NFKB2Q00653 AC211469.2-201ENST00000605461 205 ntBASIC1.06□□□□□ -2.24
NFKB2Q00653 Y_RNA.109-201ENST00000363215 102 ntBASIC1.05□□□□□ -2.24
NFKB2Q00653 MIR573-201ENST00000384964 99 ntBASIC1.05□□□□□ -2.24
NFKB2Q00653 MIR3612-201ENST00000579753 87 ntBASIC1.05□□□□□ -2.24
NFKB2Q00653 MIR429-201ENST00000362106 83 ntBASIC1.04□□□□□ -2.24
NFKB2Q00653 RNU6-924P-201ENST00000362926 108 ntBASIC1.04□□□□□ -2.24
NFKB2Q00653 RNA5SP227-201ENST00000516184 113 ntBASIC1.04□□□□□ -2.24
NFKB2Q00653 RNU7-154P-201ENST00000516194 62 ntBASIC1.04□□□□□ -2.24
NFKB2Q00653 AC011195.1-201ENST00000578177 177 ntBASIC1.04□□□□□ -2.24
NFKB2Q00653 MIR548AG1-201ENST00000579932 66 ntBASIC1.04□□□□□ -2.24
NFKB2Q00653 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
NFKB2Q00653 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 236 ms