Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.99□□□□□ -2.73
PRKDCP78527 RNU6-483P-201ENST00000384088 108 ntBASIC-1.99□□□□□ -2.73
PRKDCP78527 RNU7-30P-201ENST00000516835 62 ntBASIC-1.99□□□□□ -2.73
PRKDCP78527 MIR1255B1-201ENST00000636325 63 ntBASIC-1.99□□□□□ -2.73
PRKDCP78527 RNU6-259P-201ENST00000383999 107 ntBASIC-1.99□□□□□ -2.73
PRKDCP78527 RNU6-381P-201ENST00000391259 108 ntBASIC-1.99□□□□□ -2.73
PRKDCP78527 RNA5SP136-201ENST00000410906 107 ntBASIC-1.99□□□□□ -2.73
PRKDCP78527 RNU6-151P-201ENST00000364158 107 ntBASIC-2□□□□□ -2.73
PRKDCP78527 RNU6-578P-201ENST00000390980 103 ntBASIC-2□□□□□ -2.73
PRKDCP78527 RNU6-345P-201ENST00000517001 107 ntBASIC-2□□□□□ -2.73
PRKDCP78527 RNU6-698P-201ENST00000363523 107 ntBASIC-2□□□□□ -2.73
PRKDCP78527 RNU6-34P-201ENST00000364874 107 ntBASIC-2□□□□□ -2.73
PRKDCP78527 SNORD116-6-201ENST00000384711 96 ntBASIC-2□□□□□ -2.73
PRKDCP78527 Y_RNA.652-201ENST00000458902 102 ntBASIC-2□□□□□ -2.73
PRKDCP78527 RNU6-1289P-201ENST00000384431 106 ntBASIC-2□□□□□ -2.73
PRKDCP78527 MIR548AJ2-201ENST00000408539 92 ntBASIC-2□□□□□ -2.73
PRKDCP78527 RNU6-908P-201ENST00000410160 94 ntBASIC-2□□□□□ -2.73
PRKDCP78527 MIR548Z-201ENST00000584743 97 ntBASIC-2□□□□□ -2.73
PRKDCP78527 MIR6844-201ENST00000637122 62 ntBASIC-2□□□□□ -2.73
PRKDCP78527 AC138305.3-201ENST00000624988 240 ntBASIC-2.01□□□□□ -2.73
PRKDCP78527 SNORD116-10-201ENST00000363791 102 ntBASIC-2.01□□□□□ -2.73
PRKDCP78527 RNU6-972P-201ENST00000391208 107 ntBASIC-2.01□□□□□ -2.73
PRKDCP78527 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-2.01□□□□□ -2.73
PRKDCP78527 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.02□□□□□ -2.73
PRKDCP78527 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.02□□□□□ -2.73
PRKDCP78527 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.02□□□□□ -2.73
PRKDCP78527 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.02□□□□□ -2.73
PRKDCP78527 AL450471.1-201ENST00000447509 127 ntBASIC-2.02□□□□□ -2.73
PRKDCP78527 MIR581-201ENST00000384895 96 ntBASIC-2.02□□□□□ -2.73
PRKDCP78527 MIR1236-201ENST00000408340 102 ntBASIC-2.02□□□□□ -2.73
PRKDCP78527 RNU7-151P-201ENST00000516930 53 ntBASIC-2.02□□□□□ -2.73
PRKDCP78527 AC025253.1-201ENST00000613623 543 ntBASIC-2.02□□□□□ -2.73
PRKDCP78527 MIR559-201ENST00000385188 96 ntBASIC-2.03□□□□□ -2.73
PRKDCP78527 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.03□□□□□ -2.73
PRKDCP78527 MTND1P29-201ENST00000448112 647 ntBASIC-2.03□□□□□ -2.73
PRKDCP78527 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.03□□□□□ -2.73
PRKDCP78527 RNU6-768P-201ENST00000384683 107 ntBASIC-2.03□□□□□ -2.73
PRKDCP78527 RNU6-130P-201ENST00000411112 103 ntBASIC-2.03□□□□□ -2.73
PRKDCP78527 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.03□□□□□ -2.73
PRKDCP78527 SNORA40.14-201ENST00000516543 86 ntBASIC-2.03□□□□□ -2.73
PRKDCP78527 SNORD116.3-201ENST00000517176 78 ntBASIC-2.03□□□□□ -2.73
PRKDCP78527 RNU6-644P-201ENST00000391155 98 ntBASIC-2.03□□□□□ -2.74
PRKDCP78527 SNORD45B-201ENST00000364617 72 ntBASIC-2.04□□□□□ -2.74
PRKDCP78527 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.04□□□□□ -2.74
PRKDCP78527 RNU6-890P-201ENST00000384121 107 ntBASIC-2.04□□□□□ -2.74
PRKDCP78527 MIR363-201ENST00000384840 75 ntBASIC-2.04□□□□□ -2.74
PRKDCP78527 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.04□□□□□ -2.74
PRKDCP78527 AC080013.6-201ENST00000606185 215 ntBASIC-2.04□□□□□ -2.74
PRKDCP78527 SNORD45.2-201ENST00000363552 72 ntBASIC-2.05□□□□□ -2.74
PRKDCP78527 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.05□□□□□ -2.74
PRKDCP78527 U6.81-201ENST00000612550 106 ntBASIC-2.05□□□□□ -2.74
PRKDCP78527 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.05□□□□□ -2.74
PRKDCP78527 MIR122-201ENST00000385044 85 ntBASIC-2.05□□□□□ -2.74
PRKDCP78527 RNU6-587P-201ENST00000391282 106 ntBASIC-2.05□□□□□ -2.74
PRKDCP78527 RNU6-737P-201ENST00000365370 107 ntBASIC-2.05□□□□□ -2.74
PRKDCP78527 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.05□□□□□ -2.74
PRKDCP78527 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.05□□□□□ -2.74
PRKDCP78527 MIR8053-201ENST00000613344 75 ntBASIC-2.05□□□□□ -2.74
PRKDCP78527 MIR3144-201ENST00000579460 79 ntBASIC-2.06□□□□□ -2.74
PRKDCP78527 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.06□□□□□ -2.74
PRKDCP78527 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.06□□□□□ -2.74
PRKDCP78527 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.06□□□□□ -2.74
PRKDCP78527 SNORD58A-201ENST00000383875 65 ntBASIC-2.06□□□□□ -2.74
PRKDCP78527 SNORA40.15-201ENST00000516884 107 ntBASIC-2.06□□□□□ -2.74
PRKDCP78527 Y_RNA.496-201ENST00000384444 101 ntBASIC-2.07□□□□□ -2.74
PRKDCP78527 SNORD116-16-201ENST00000384533 92 ntBASIC-2.07□□□□□ -2.74
PRKDCP78527 RNU6-523P-201ENST00000516304 54 ntBASIC-2.07□□□□□ -2.74
PRKDCP78527 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.07□□□□□ -2.74
PRKDCP78527 MIR5009-201ENST00000578736 100 ntBASIC-2.07□□□□□ -2.74
PRKDCP78527 RNU6-816P-201ENST00000390914 107 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 MIR5690-201ENST00000583739 73 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 MIR579-201ENST00000385221 98 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 RNU6-176P-201ENST00000517196 105 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 RNU6-822P-201ENST00000362707 106 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 RNU6-310P-201ENST00000384655 107 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 SNORA75.5-201ENST00000391291 81 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 MIR1302-6-201ENST00000408466 90 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.08□□□□□ -2.74
PRKDCP78527 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 AC109635.3-201ENST00000529536 185 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 RNU6-508P-201ENST00000363231 103 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 RNU6-668P-201ENST00000364180 107 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 RNU6-649P-201ENST00000384463 107 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 RNU6-665P-201ENST00000384639 107 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 RNU6-554P-201ENST00000410466 106 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 Y_RNA.604-201ENST00000410574 102 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 MIR4796-201ENST00000580742 81 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.09□□□□□ -2.74
PRKDCP78527 AC104985.2-201ENST00000620598 500 ntBASIC-2.09□□□□□ -2.74
PRKDCP78527 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.1□□□□□ -2.74
PRKDCP78527 SNORD63.2-201ENST00000516303 64 ntBASIC-2.1□□□□□ -2.74
PRKDCP78527 AC006362.1-201ENST00000567392 174 ntBASIC-2.1□□□□□ -2.74
PRKDCP78527 MIR4679-2-201ENST00000578358 77 ntBASIC-2.1□□□□□ -2.74
PRKDCP78527 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.1□□□□□ -2.75
PRKDCP78527 SNORD37.2-201ENST00000391075 66 ntBASIC-2.1□□□□□ -2.75
PRKDCP78527 RNU6-493P-201ENST00000391321 108 ntBASIC-2.1□□□□□ -2.75
PRKDCP78527 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-2.1□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms