Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 snoU13.13-201ENST00000458842 104 ntBASIC-0.45□□□□□ -2.48
CX3CL1P78423 RNU7-55P-201ENST00000459426 62 ntBASIC-0.45□□□□□ -2.48
CX3CL1P78423 AC021146.9-201ENST00000512503 156 ntBASIC-0.45□□□□□ -2.48
CX3CL1P78423 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.45□□□□□ -2.48
CX3CL1P78423 SNORD114-11-201ENST00000363738 75 ntBASIC-0.46□□□□□ -2.48
CX3CL1P78423 SNORD116-22-201ENST00000384430 92 ntBASIC-0.46□□□□□ -2.48
CX3CL1P78423 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
CX3CL1P78423 RNU6-274P-201ENST00000459566 107 ntBASIC-0.46□□□□□ -2.48
CX3CL1P78423 MIR548AZ-201ENST00000616567 95 ntBASIC-0.46□□□□□ -2.48
CX3CL1P78423 MIR6759-201ENST00000638110 65 ntBASIC-0.46□□□□□ -2.48
CX3CL1P78423 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.47□□□□□ -2.48
CX3CL1P78423 SNORD56B-201ENST00000384713 71 ntBASIC-0.47□□□□□ -2.48
CX3CL1P78423 AL450471.1-201ENST00000447509 127 ntBASIC-0.47□□□□□ -2.48
CX3CL1P78423 RNA5SP66-201ENST00000517178 101 ntBASIC-0.47□□□□□ -2.48
CX3CL1P78423 SNORD115-37-201ENST00000363768 82 ntBASIC-0.48□□□□□ -2.49
CX3CL1P78423 RNU6-219P-201ENST00000364728 107 ntBASIC-0.48□□□□□ -2.49
CX3CL1P78423 RNU6-901P-201ENST00000384593 106 ntBASIC-0.48□□□□□ -2.49
CX3CL1P78423 RNU6-402P-201ENST00000410678 103 ntBASIC-0.48□□□□□ -2.49
CX3CL1P78423 MIR6773-201ENST00000612812 74 ntBASIC-0.48□□□□□ -2.49
CX3CL1P78423 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.48□□□□□ -2.49
CX3CL1P78423 MIR6509-201ENST00000614603 85 ntBASIC-0.48□□□□□ -2.49
CX3CL1P78423 RNU6-208P-201ENST00000362431 107 ntBASIC-0.49□□□□□ -2.49
CX3CL1P78423 SNORA32.3-201ENST00000384772 121 ntBASIC-0.49□□□□□ -2.49
CX3CL1P78423 MIR203A-201ENST00000384836 110 ntBASIC-0.49□□□□□ -2.49
CX3CL1P78423 AL445193.1-201ENST00000441183 141 ntBASIC-0.49□□□□□ -2.49
CX3CL1P78423 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.49□□□□□ -2.49
CX3CL1P78423 MIR4802-201ENST00000581881 80 ntBASIC-0.49□□□□□ -2.49
CX3CL1P78423 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.49□□□□□ -2.49
CX3CL1P78423 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.5□□□□□ -2.49
CX3CL1P78423 SNORD14C-201ENST00000365382 88 ntBASIC-0.5□□□□□ -2.49
CX3CL1P78423 RNU6-260P-201ENST00000384092 107 ntBASIC-0.5□□□□□ -2.49
CX3CL1P78423 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.5□□□□□ -2.49
CX3CL1P78423 RNU6-592P-201ENST00000411333 103 ntBASIC-0.5□□□□□ -2.49
CX3CL1P78423 AL691482.2-201ENST00000457453 84 ntBASIC-0.5□□□□□ -2.49
CX3CL1P78423 AP001180.6-201ENST00000584918 159 ntBASIC-0.5□□□□□ -2.49
CX3CL1P78423 uc_338.36-201ENST00000622331 158 ntBASIC-0.5□□□□□ -2.49
CX3CL1P78423 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 RNU6-973P-201ENST00000364690 107 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 RNY1P7-201ENST00000384743 110 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 MIR196A2-201ENST00000385189 110 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 SNORD77.2-201ENST00000391045 68 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 SNORD126-201ENST00000459475 77 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.51□□□□□ -2.49
CX3CL1P78423 RNU6-168P-201ENST00000516189 101 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 RNU6-267P-201ENST00000516714 103 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 MIR3657-201ENST00000584818 117 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 AC093726.3-201ENST00000637588 150 ntBASIC-0.51□□□□□ -2.49
CX3CL1P78423 SNORA2.1-201ENST00000363089 137 ntBASIC-0.52□□□□□ -2.49
CX3CL1P78423 RNU6-497P-201ENST00000365316 104 ntBASIC-0.52□□□□□ -2.49
CX3CL1P78423 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.52□□□□□ -2.49
CX3CL1P78423 RNA5SP451-201ENST00000410588 110 ntBASIC-0.52□□□□□ -2.49
CX3CL1P78423 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.53□□□□□ -2.49
CX3CL1P78423 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.53□□□□□ -2.49
CX3CL1P78423 MIRLET7B-201ENST00000385140 83 ntBASIC-0.53□□□□□ -2.49
CX3CL1P78423 RNU6-337P-201ENST00000391243 106 ntBASIC-0.53□□□□□ -2.49
CX3CL1P78423 SNORD75.1-201ENST00000408373 60 ntBASIC-0.53□□□□□ -2.49
CX3CL1P78423 AC093729.1-201ENST00000513074 128 ntBASIC-0.53□□□□□ -2.49
CX3CL1P78423 RNA5SP147-201ENST00000516493 109 ntBASIC-0.53□□□□□ -2.49
CX3CL1P78423 AL391099.1-201ENST00000624635 187 ntBASIC-0.53□□□□□ -2.49
CX3CL1P78423 RNU6-340P-201ENST00000364005 107 ntBASIC-0.54□□□□□ -2.5
CX3CL1P78423 RNA5SP89-201ENST00000410300 108 ntBASIC-0.54□□□□□ -2.5
CX3CL1P78423 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.54□□□□□ -2.5
CX3CL1P78423 RPS29P8-201ENST00000445109 171 ntBASIC-0.54□□□□□ -2.5
CX3CL1P78423 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.54□□□□□ -2.5
CX3CL1P78423 RNU6-752P-201ENST00000516376 102 ntBASIC-0.54□□□□□ -2.5
CX3CL1P78423 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.54□□□□□ -2.5
CX3CL1P78423 U6.96-201ENST00000636425 70 ntBASIC-0.54□□□□□ -2.5
CX3CL1P78423 MIR101-1-201ENST00000362265 75 ntBASIC-0.55□□□□□ -2.5
CX3CL1P78423 RNU6-844P-201ENST00000517175 102 ntBASIC-0.55□□□□□ -2.5
CX3CL1P78423 AC140658.3-201ENST00000567603 271 ntBASIC-0.55□□□□□ -2.5
CX3CL1P78423 MIR4432-201ENST00000581823 84 ntBASIC-0.55□□□□□ -2.5
CX3CL1P78423 MIR4280-201ENST00000582178 76 ntBASIC-0.55□□□□□ -2.5
CX3CL1P78423 MIR548BB-201ENST00000626714 66 ntBASIC-0.55□□□□□ -2.5
CX3CL1P78423 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.56□□□□□ -2.5
CX3CL1P78423 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.56□□□□□ -2.5
CX3CL1P78423 MIR5589-201ENST00000579442 60 ntBASIC-0.56□□□□□ -2.5
CX3CL1P78423 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
CX3CL1P78423 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.56□□□□□ -2.5
CX3CL1P78423 RNU6-624P-201ENST00000363411 107 ntBASIC-0.57□□□□□ -2.5
CX3CL1P78423 RNU6-681P-201ENST00000364012 104 ntBASIC-0.57□□□□□ -2.5
CX3CL1P78423 RNU6-153P-201ENST00000364422 104 ntBASIC-0.57□□□□□ -2.5
CX3CL1P78423 RNU6-675P-201ENST00000384236 104 ntBASIC-0.57□□□□□ -2.5
CX3CL1P78423 MIR6851-201ENST00000617060 67 ntBASIC-0.57□□□□□ -2.5
CX3CL1P78423 snoR1.1-201ENST00000628177 80 ntBASIC-0.57□□□□□ -2.5
CX3CL1P78423 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.58□□□□□ -2.5
CX3CL1P78423 SNORD115-23-201ENST00000364461 82 ntBASIC-0.58□□□□□ -2.5
CX3CL1P78423 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.58□□□□□ -2.5
CX3CL1P78423 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.58□□□□□ -2.5
CX3CL1P78423 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.58□□□□□ -2.5
CX3CL1P78423 YWHAEP3-201ENST00000582767 121 ntBASIC-0.58□□□□□ -2.5
CX3CL1P78423 MIR4493-201ENST00000584016 73 ntBASIC-0.58□□□□□ -2.5
CX3CL1P78423 MIR5704-201ENST00000584029 77 ntBASIC-0.58□□□□□ -2.5
CX3CL1P78423 SNORA33.1-201ENST00000364957 130 ntBASIC-0.59□□□□□ -2.5
CX3CL1P78423 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.59□□□□□ -2.5
CX3CL1P78423 RNU6-284P-201ENST00000411105 106 ntBASIC-0.59□□□□□ -2.5
CX3CL1P78423 AC114755.3-201ENST00000481111 251 ntBASIC-0.59□□□□□ -2.5
CX3CL1P78423 RNA5SP169-201ENST00000517268 117 ntBASIC-0.59□□□□□ -2.5
CX3CL1P78423 AC090617.8-201ENST00000623339 167 ntBASIC-0.59□□□□□ -2.5
CX3CL1P78423 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms