Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.03□□□□□ -2.57
RHBDL3P58872 MT-TR-201ENST00000387439 65 ntBASIC-1.03□□□□□ -2.57
RHBDL3P58872 AC097510.1-201ENST00000510945 133 ntBASIC-1.03□□□□□ -2.57
RHBDL3P58872 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.04□□□□□ -2.58
RHBDL3P58872 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.04□□□□□ -2.58
RHBDL3P58872 RNA5SP292-201ENST00000390974 118 ntBASIC-1.04□□□□□ -2.58
RHBDL3P58872 MIR1468-201ENST00000410600 86 ntBASIC-1.04□□□□□ -2.58
RHBDL3P58872 RNU6-881P-201ENST00000516813 102 ntBASIC-1.04□□□□□ -2.58
RHBDL3P58872 snoR1.1-201ENST00000628177 80 ntBASIC-1.04□□□□□ -2.58
RHBDL3P58872 RNU6-502P-201ENST00000362419 108 ntBASIC-1.05□□□□□ -2.58
RHBDL3P58872 RNU4-32P-201ENST00000363404 141 ntBASIC-1.05□□□□□ -2.58
RHBDL3P58872 MIR590-201ENST00000385008 97 ntBASIC-1.05□□□□□ -2.58
RHBDL3P58872 MIR518B-201ENST00000385127 83 ntBASIC-1.05□□□□□ -2.58
RHBDL3P58872 MIR196A1-201ENST00000388006 70 ntBASIC-1.05□□□□□ -2.58
RHBDL3P58872 AL365222.1-201ENST00000614661 98 ntBASIC-1.05□□□□□ -2.58
RHBDL3P58872 MIR3179-1-201ENST00000578940 84 ntBASIC-1.06□□□□□ -2.58
RHBDL3P58872 MIR3179-2-201ENST00000579107 84 ntBASIC-1.06□□□□□ -2.58
RHBDL3P58872 MIR3179-3-201ENST00000579566 84 ntBASIC-1.06□□□□□ -2.58
RHBDL3P58872 MIR3179-4-201ENST00000617599 84 ntBASIC-1.06□□□□□ -2.58
RHBDL3P58872 RNU6-721P-201ENST00000410155 105 ntBASIC-1.08□□□□□ -2.58
RHBDL3P58872 RNU6-537P-201ENST00000517277 103 ntBASIC-1.08□□□□□ -2.58
RHBDL3P58872 MIR5704-201ENST00000584029 77 ntBASIC-1.08□□□□□ -2.58
RHBDL3P58872 MIR198-201ENST00000637333 62 ntBASIC-1.08□□□□□ -2.58
RHBDL3P58872 RNU7-61P-201ENST00000515897 61 ntBASIC-1.09□□□□□ -2.58
RHBDL3P58872 MIR4320-201ENST00000636981 65 ntBASIC-1.09□□□□□ -2.58
RHBDL3P58872 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.09□□□□□ -2.58
RHBDL3P58872 RNU6-106P-201ENST00000384405 107 ntBASIC-1.1□□□□□ -2.59
RHBDL3P58872 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.1□□□□□ -2.59
RHBDL3P58872 MIR1236-201ENST00000408340 102 ntBASIC-1.1□□□□□ -2.59
RHBDL3P58872 RNU6-554P-201ENST00000410466 106 ntBASIC-1.1□□□□□ -2.59
RHBDL3P58872 SCARNA17-201ENST00000516183 144 ntBASIC-1.1□□□□□ -2.59
RHBDL3P58872 SNORD22.1-201ENST00000516331 125 ntBASIC-1.1□□□□□ -2.59
RHBDL3P58872 MIR6854-201ENST00000614935 69 ntBASIC-1.1□□□□□ -2.59
RHBDL3P58872 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.11□□□□□ -2.59
RHBDL3P58872 MIR6773-201ENST00000612812 74 ntBASIC-1.11□□□□□ -2.59
RHBDL3P58872 RNU6-22P-201ENST00000384355 107 ntBASIC-1.12□□□□□ -2.59
RHBDL3P58872 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.12□□□□□ -2.59
RHBDL3P58872 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
RHBDL3P58872 AC021146.9-201ENST00000512503 156 ntBASIC-1.12□□□□□ -2.59
RHBDL3P58872 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.12□□□□□ -2.59
RHBDL3P58872 AC026421.1-201ENST00000519101 163 ntBASIC-1.12□□□□□ -2.59
RHBDL3P58872 MIR6129-201ENST00000616087 109 ntBASIC-1.12□□□□□ -2.59
RHBDL3P58872 MIR6738-201ENST00000619620 64 ntBASIC-1.12□□□□□ -2.59
RHBDL3P58872 SNORD83B-201ENST00000386745 93 ntBASIC-1.13□□□□□ -2.59
RHBDL3P58872 RNU6-479P-201ENST00000516348 105 ntBASIC-1.13□□□□□ -2.59
RHBDL3P58872 RNU6-766P-201ENST00000362478 107 ntBASIC-1.14□□□□□ -2.59
RHBDL3P58872 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.14□□□□□ -2.59
RHBDL3P58872 AC022137.1-201ENST00000483735 151 ntBASIC-1.14□□□□□ -2.59
RHBDL3P58872 RNU6-589P-201ENST00000516485 107 ntBASIC-1.14□□□□□ -2.59
RHBDL3P58872 MIR4796-201ENST00000580742 81 ntBASIC-1.14□□□□□ -2.59
RHBDL3P58872 MIR8068-201ENST00000618032 68 ntBASIC-1.14□□□□□ -2.59
RHBDL3P58872 RNU6-10P-201ENST00000384036 107 ntBASIC-1.15□□□□□ -2.59
RHBDL3P58872 RNU6-313P-201ENST00000516317 112 ntBASIC-1.15□□□□□ -2.59
RHBDL3P58872 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.16□□□□□ -2.6
RHBDL3P58872 SNORD74.6-201ENST00000364796 70 ntBASIC-1.16□□□□□ -2.6
RHBDL3P58872 MIR517B-201ENST00000385102 67 ntBASIC-1.16□□□□□ -2.6
RHBDL3P58872 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.16□□□□□ -2.6
RHBDL3P58872 RNU6-592P-201ENST00000411333 103 ntBASIC-1.16□□□□□ -2.6
RHBDL3P58872 AP000533.3-201ENST00000447704 118 ntBASIC-1.16□□□□□ -2.6
RHBDL3P58872 MIR2052-201ENST00000636055 55 ntBASIC-1.16□□□□□ -2.6
RHBDL3P58872 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.17□□□□□ -2.6
RHBDL3P58872 RNU6-158P-201ENST00000517104 100 ntBASIC-1.17□□□□□ -2.6
RHBDL3P58872 AC132825.6-201ENST00000638861 357 ntBASIC-1.17□□□□□ -2.6
RHBDL3P58872 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.18□□□□□ -2.6
RHBDL3P58872 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.18□□□□□ -2.6
RHBDL3P58872 RNU6-382P-201ENST00000365181 106 ntBASIC-1.18□□□□□ -2.6
RHBDL3P58872 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.18□□□□□ -2.6
RHBDL3P58872 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.18□□□□□ -2.6
RHBDL3P58872 MIRLET7B-201ENST00000385140 83 ntBASIC-1.18□□□□□ -2.6
RHBDL3P58872 MIR601-201ENST00000385256 79 ntBASIC-1.18□□□□□ -2.6
RHBDL3P58872 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
RHBDL3P58872 RNU6-274P-201ENST00000459566 107 ntBASIC-1.18□□□□□ -2.6
RHBDL3P58872 MIR4773-1-201ENST00000637203 78 ntBASIC-1.18□□□□□ -2.6
RHBDL3P58872 SNORD115-23-201ENST00000364461 82 ntBASIC-1.19□□□□□ -2.6
RHBDL3P58872 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.19□□□□□ -2.6
RHBDL3P58872 U7.3-201ENST00000616123 62 ntBASIC-1.19□□□□□ -2.6
RHBDL3P58872 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.19□□□□□ -2.6
RHBDL3P58872 U6.96-201ENST00000636425 70 ntBASIC-1.19□□□□□ -2.6
RHBDL3P58872 RNU6-990P-201ENST00000364385 104 ntBASIC-1.2□□□□□ -2.6
RHBDL3P58872 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.2□□□□□ -2.6
RHBDL3P58872 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.2□□□□□ -2.6
RHBDL3P58872 RNU6-905P-201ENST00000384434 107 ntBASIC-1.2□□□□□ -2.6
RHBDL3P58872 SNORD90-201ENST00000391145 111 ntBASIC-1.2□□□□□ -2.6
RHBDL3P58872 RNU6-337P-201ENST00000391243 106 ntBASIC-1.2□□□□□ -2.6
RHBDL3P58872 RNU6-109P-201ENST00000516364 107 ntBASIC-1.2□□□□□ -2.6
RHBDL3P58872 RNU6-184P-201ENST00000516514 107 ntBASIC-1.2□□□□□ -2.6
RHBDL3P58872 SNORD114-25-201ENST00000363742 72 ntBASIC-1.21□□□□□ -2.6
RHBDL3P58872 RNU6-260P-201ENST00000384092 107 ntBASIC-1.21□□□□□ -2.6
RHBDL3P58872 SNORA19-201ENST00000384737 128 ntBASIC-1.21□□□□□ -2.6
RHBDL3P58872 AL500527.2-201ENST00000454105 95 ntBASIC-1.21□□□□□ -2.6
RHBDL3P58872 SNORD18.2-201ENST00000459604 70 ntBASIC-1.22□□□□□ -2.6
RHBDL3P58872 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.22□□□□□ -2.6
RHBDL3P58872 MIR4723-201ENST00000585070 81 ntBASIC-1.22□□□□□ -2.6
RHBDL3P58872 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.23□□□□□ -2.61
RHBDL3P58872 MIR4324-201ENST00000584846 72 ntBASIC-1.23□□□□□ -2.61
RHBDL3P58872 AL031737.1-201ENST00000450125 223 ntBASIC-1.24□□□□□ -2.61
RHBDL3P58872 AL691482.2-201ENST00000457453 84 ntBASIC-1.24□□□□□ -2.61
RHBDL3P58872 RNU6-162P-201ENST00000516228 103 ntBASIC-1.24□□□□□ -2.61
RHBDL3P58872 MIR6509-201ENST00000614603 85 ntBASIC-1.24□□□□□ -2.61
RHBDL3P58872 SNORA2.1-201ENST00000363089 137 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 307.6 ms