Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU6-382P-201ENST00000365181 106 ntBASIC-1.22□□□□□ -2.6
VSX2P58304 RNU6-886P-201ENST00000384319 105 ntBASIC-1.22□□□□□ -2.6
VSX2P58304 MT-TG-201ENST00000387429 68 ntBASIC-1.22□□□□□ -2.6
VSX2P58304 RNU6-519P-201ENST00000410590 108 ntBASIC-1.22□□□□□ -2.6
VSX2P58304 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.22□□□□□ -2.6
VSX2P58304 MIR4464-201ENST00000580818 92 ntBASIC-1.22□□□□□ -2.6
VSX2P58304 SNORD114-17-201ENST00000364699 75 ntBASIC-1.23□□□□□ -2.61
VSX2P58304 MIR29B1-201ENST00000385015 81 ntBASIC-1.23□□□□□ -2.61
VSX2P58304 snoU13.17-201ENST00000458802 104 ntBASIC-1.23□□□□□ -2.61
VSX2P58304 RNU6-260P-201ENST00000384092 107 ntBASIC-1.24□□□□□ -2.61
VSX2P58304 MIR203A-201ENST00000384836 110 ntBASIC-1.24□□□□□ -2.61
VSX2P58304 HLA-S-202ENST00000425174 53 ntBASIC-1.24□□□□□ -2.61
VSX2P58304 RNA5SP147-201ENST00000516493 109 ntBASIC-1.24□□□□□ -2.61
VSX2P58304 RNU6-182P-201ENST00000516970 105 ntBASIC-1.24□□□□□ -2.61
VSX2P58304 AL353621.2-201ENST00000605340 133 ntBASIC-1.24□□□□□ -2.61
VSX2P58304 SNORA40-201ENST00000388090 126 ntBASIC-1.25□□□□□ -2.61
VSX2P58304 RNU6-62P-201ENST00000516526 102 ntBASIC-1.25□□□□□ -2.61
VSX2P58304 AL353803.5-201ENST00000599815 141 ntBASIC-1.25□□□□□ -2.61
VSX2P58304 MIR6129-201ENST00000616087 109 ntBASIC-1.25□□□□□ -2.61
VSX2P58304 RNU6-824P-201ENST00000363724 104 ntBASIC-1.26□□□□□ -2.61
VSX2P58304 SNORA62.4-201ENST00000365504 151 ntBASIC-1.26□□□□□ -2.61
VSX2P58304 MIR6888-201ENST00000621977 67 ntBASIC-1.26□□□□□ -2.61
VSX2P58304 AC099654.10-201ENST00000640395 161 ntBASIC-1.26□□□□□ -2.61
VSX2P58304 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.27□□□□□ -2.61
VSX2P58304 RNU7-200P-201ENST00000516105 62 ntBASIC-1.27□□□□□ -2.61
VSX2P58304 RNU6-971P-201ENST00000516920 106 ntBASIC-1.27□□□□□ -2.61
VSX2P58304 SNORA33.1-201ENST00000364957 130 ntBASIC-1.28□□□□□ -2.61
VSX2P58304 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
VSX2P58304 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.28□□□□□ -2.61
VSX2P58304 MTATP6P29-201ENST00000415057 132 ntBASIC-1.28□□□□□ -2.61
VSX2P58304 SNORD33.1-201ENST00000516213 88 ntBASIC-1.28□□□□□ -2.61
VSX2P58304 RNU6-346P-201ENST00000516288 111 ntBASIC-1.28□□□□□ -2.61
VSX2P58304 MIR4773-1-201ENST00000637203 78 ntBASIC-1.28□□□□□ -2.61
VSX2P58304 MIR3914-2-201ENST00000637339 95 ntBASIC-1.28□□□□□ -2.61
VSX2P58304 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.29□□□□□ -2.62
VSX2P58304 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.29□□□□□ -2.62
VSX2P58304 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.29□□□□□ -2.62
VSX2P58304 MIR548I1-201ENST00000408810 149 ntBASIC-1.29□□□□□ -2.62
VSX2P58304 RNU6-158P-201ENST00000517104 100 ntBASIC-1.29□□□□□ -2.62
VSX2P58304 MIR5591-201ENST00000578248 65 ntBASIC-1.29□□□□□ -2.62
VSX2P58304 AC006254.2-201ENST00000603259 279 ntBASIC-1.29□□□□□ -2.62
VSX2P58304 AL445584.3-201ENST00000617173 78 ntBASIC-1.29□□□□□ -2.62
VSX2P58304 SNORD58A-201ENST00000383875 65 ntBASIC-1.3□□□□□ -2.62
VSX2P58304 MIR1255B2-201ENST00000408618 67 ntBASIC-1.3□□□□□ -2.62
VSX2P58304 SNORA19.1-201ENST00000410656 129 ntBASIC-1.3□□□□□ -2.62
VSX2P58304 RNA5SP180-201ENST00000516181 101 ntBASIC-1.3□□□□□ -2.62
VSX2P58304 MIR6509-201ENST00000614603 85 ntBASIC-1.3□□□□□ -2.62
VSX2P58304 MIR6818-201ENST00000621576 65 ntBASIC-1.3□□□□□ -2.62
VSX2P58304 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.31□□□□□ -2.62
VSX2P58304 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.31□□□□□ -2.62
VSX2P58304 MIR889-201ENST00000401280 79 ntBASIC-1.31□□□□□ -2.62
VSX2P58304 CYP3A54P-201ENST00000566950 75 ntBASIC-1.31□□□□□ -2.62
VSX2P58304 MIR1246-201ENST00000636535 73 ntBASIC-1.31□□□□□ -2.62
VSX2P58304 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.32□□□□□ -2.62
VSX2P58304 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.32□□□□□ -2.62
VSX2P58304 MIR3657-201ENST00000584818 117 ntBASIC-1.32□□□□□ -2.62
VSX2P58304 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.33□□□□□ -2.62
VSX2P58304 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.33□□□□□ -2.62
VSX2P58304 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.33□□□□□ -2.62
VSX2P58304 MIR548A3-201ENST00000385297 97 ntBASIC-1.33□□□□□ -2.62
VSX2P58304 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.33□□□□□ -2.62
VSX2P58304 MIR198-201ENST00000637333 62 ntBASIC-1.33□□□□□ -2.62
VSX2P58304 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.34□□□□□ -2.62
VSX2P58304 MIR1285-2-201ENST00000408311 88 ntBASIC-1.34□□□□□ -2.62
VSX2P58304 MIR1468-201ENST00000410600 86 ntBASIC-1.34□□□□□ -2.62
VSX2P58304 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.34□□□□□ -2.62
VSX2P58304 MIR527-201ENST00000385244 85 ntBASIC-1.35□□□□□ -2.63
VSX2P58304 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.35□□□□□ -2.63
VSX2P58304 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.35□□□□□ -2.63
VSX2P58304 RNU6-659P-201ENST00000516454 104 ntBASIC-1.35□□□□□ -2.63
VSX2P58304 MIR4520-1-201ENST00000582609 70 ntBASIC-1.35□□□□□ -2.63
VSX2P58304 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.35□□□□□ -2.63
VSX2P58304 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.36□□□□□ -2.63
VSX2P58304 RNU6-746P-201ENST00000384112 109 ntBASIC-1.36□□□□□ -2.63
VSX2P58304 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.36□□□□□ -2.63
VSX2P58304 AL691482.2-201ENST00000457453 84 ntBASIC-1.36□□□□□ -2.63
VSX2P58304 SCARNA23-201ENST00000516060 130 ntBASIC-1.36□□□□□ -2.63
VSX2P58304 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.36□□□□□ -2.63
VSX2P58304 RNU6-255P-201ENST00000516957 105 ntBASIC-1.36□□□□□ -2.63
VSX2P58304 MIR4770-201ENST00000579149 58 ntBASIC-1.36□□□□□ -2.63
VSX2P58304 MIR6502-201ENST00000617296 76 ntBASIC-1.36□□□□□ -2.63
VSX2P58304 SNORA2.1-201ENST00000363089 137 ntBASIC-1.37□□□□□ -2.63
VSX2P58304 SNORD115-33-201ENST00000363723 82 ntBASIC-1.37□□□□□ -2.63
VSX2P58304 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.37□□□□□ -2.63
VSX2P58304 RNU6-80P-201ENST00000384195 107 ntBASIC-1.37□□□□□ -2.63
VSX2P58304 RNU6-540P-201ENST00000384622 101 ntBASIC-1.37□□□□□ -2.63
VSX2P58304 SNORD63.1-201ENST00000516178 80 ntBASIC-1.37□□□□□ -2.63
VSX2P58304 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.38□□□□□ -2.63
VSX2P58304 RNU6-576P-201ENST00000390854 102 ntBASIC-1.38□□□□□ -2.63
VSX2P58304 SNORA26.4-201ENST00000391188 123 ntBASIC-1.38□□□□□ -2.63
VSX2P58304 RNU6-972P-201ENST00000391208 107 ntBASIC-1.38□□□□□ -2.63
VSX2P58304 RNU6-887P-201ENST00000410660 100 ntBASIC-1.38□□□□□ -2.63
VSX2P58304 RNU6-904P-201ENST00000516206 101 ntBASIC-1.38□□□□□ -2.63
VSX2P58304 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.38□□□□□ -2.63
VSX2P58304 RNA5SP26-201ENST00000362406 119 ntBASIC-1.39□□□□□ -2.63
VSX2P58304 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.39□□□□□ -2.63
VSX2P58304 RNU2-51P-201ENST00000410708 197 ntBASIC-1.39□□□□□ -2.63
VSX2P58304 U6.95-201ENST00000636931 70 ntBASIC-1.39□□□□□ -2.63
VSX2P58304 RNU5F-1-201ENST00000362507 117 ntBASIC-1.4□□□□□ -2.63
VSX2P58304 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms