Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RNA5SP476-201ENST00000516613 103 ntBASIC0.3□□□□□ -2.36
PER3P56645 SCARNA17.3-201ENST00000516381 125 ntBASIC0.29□□□□□ -2.36
PER3P56645 RNU6-782P-201ENST00000516852 104 ntBASIC0.29□□□□□ -2.36
PER3P56645 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
PER3P56645 RNU6-228P-201ENST00000362700 106 ntBASIC0.28□□□□□ -2.36
PER3P56645 Y_RNA.219-201ENST00000364232 113 ntBASIC0.28□□□□□ -2.36
PER3P56645 MIR548H2-201ENST00000408874 88 ntBASIC0.28□□□□□ -2.36
PER3P56645 MIR3202-2-201ENST00000635980 79 ntBASIC0.28□□□□□ -2.36
PER3P56645 MIR4315-1-201ENST00000636800 73 ntBASIC0.28□□□□□ -2.36
PER3P56645 MIR4315-2-201ENST00000640925 73 ntBASIC0.28□□□□□ -2.36
PER3P56645 SNORD114-4-201ENST00000363962 75 ntBASIC0.27□□□□□ -2.37
PER3P56645 RNU6-1039P-201ENST00000383931 107 ntBASIC0.27□□□□□ -2.37
PER3P56645 RNU6-1124P-201ENST00000384169 107 ntBASIC0.27□□□□□ -2.37
PER3P56645 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.27□□□□□ -2.37
PER3P56645 MIR876-201ENST00000401147 81 ntBASIC0.27□□□□□ -2.37
PER3P56645 SNORA72.7-201ENST00000516349 94 ntBASIC0.27□□□□□ -2.37
PER3P56645 RNU7-188P-201ENST00000517063 64 ntBASIC0.27□□□□□ -2.37
PER3P56645 SNORA40.17-201ENST00000517256 115 ntBASIC0.27□□□□□ -2.37
PER3P56645 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.27□□□□□ -2.37
PER3P56645 AC084368.1-201ENST00000620935 65 ntBASIC0.27□□□□□ -2.37
PER3P56645 MIR6086-201ENST00000638065 55 ntBASIC0.27□□□□□ -2.37
PER3P56645 MIR643-201ENST00000385267 97 ntBASIC0.26□□□□□ -2.37
PER3P56645 AC074348.1-201ENST00000426503 132 ntBASIC0.26□□□□□ -2.37
PER3P56645 RNU6-274P-201ENST00000459566 107 ntBASIC0.26□□□□□ -2.37
PER3P56645 RNU6-303P-201ENST00000517091 106 ntBASIC0.26□□□□□ -2.37
PER3P56645 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
PER3P56645 RNU6-681P-201ENST00000364012 104 ntBASIC0.25□□□□□ -2.37
PER3P56645 RNU6-990P-201ENST00000364385 104 ntBASIC0.25□□□□□ -2.37
PER3P56645 MIR582-201ENST00000365731 98 ntBASIC0.25□□□□□ -2.37
PER3P56645 RNA5SP299-201ENST00000391203 116 ntBASIC0.25□□□□□ -2.37
PER3P56645 RNU6-175P-201ENST00000516896 107 ntBASIC0.25□□□□□ -2.37
PER3P56645 SCARNA11.2-201ENST00000517183 154 ntBASIC0.25□□□□□ -2.37
PER3P56645 RN7SL660P-201ENST00000614852 299 ntBASIC0.25□□□□□ -2.37
PER3P56645 MIR329-2-201ENST00000385029 84 ntBASIC0.24□□□□□ -2.37
PER3P56645 MIR1255A-201ENST00000408338 113 ntBASIC0.24□□□□□ -2.37
PER3P56645 RNU6-330P-201ENST00000363015 107 ntBASIC0.23□□□□□ -2.37
PER3P56645 SNORD78.1-201ENST00000390866 65 ntBASIC0.23□□□□□ -2.37
PER3P56645 MIR548E-201ENST00000408287 88 ntBASIC0.23□□□□□ -2.37
PER3P56645 AL691482.2-201ENST00000457453 84 ntBASIC0.23□□□□□ -2.37
PER3P56645 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
PER3P56645 MIR6509-201ENST00000614603 85 ntBASIC0.23□□□□□ -2.37
PER3P56645 MIR20A-201ENST00000362279 71 ntBASIC0.22□□□□□ -2.37
PER3P56645 SNORD114-29-201ENST00000364819 70 ntBASIC0.22□□□□□ -2.37
PER3P56645 RNU6-260P-201ENST00000384092 107 ntBASIC0.22□□□□□ -2.37
PER3P56645 MIR203A-201ENST00000384836 110 ntBASIC0.22□□□□□ -2.37
PER3P56645 SNORA42.1-201ENST00000363515 137 ntBASIC0.21□□□□□ -2.38
PER3P56645 AC244090.1-201ENST00000441884 93 ntBASIC0.21□□□□□ -2.38
PER3P56645 RNU6-752P-201ENST00000516376 102 ntBASIC0.21□□□□□ -2.38
PER3P56645 MIR4484-201ENST00000582855 83 ntBASIC0.21□□□□□ -2.38
PER3P56645 RNU6-1094P-201ENST00000362416 104 ntBASIC0.2□□□□□ -2.38
PER3P56645 SNORA75.1-201ENST00000391130 148 ntBASIC0.2□□□□□ -2.38
PER3P56645 MIR1265-201ENST00000408444 86 ntBASIC0.2□□□□□ -2.38
PER3P56645 MIR3657-201ENST00000584818 117 ntBASIC0.2□□□□□ -2.38
PER3P56645 AC104408.1-201ENST00000605241 170 ntBASIC0.2□□□□□ -2.38
PER3P56645 RNA5SP214-201ENST00000363378 118 ntBASIC0.19□□□□□ -2.38
PER3P56645 SCARNA18B-201ENST00000458806 135 ntBASIC0.19□□□□□ -2.38
PER3P56645 MIR1297-201ENST00000637311 77 ntBASIC0.19□□□□□ -2.38
PER3P56645 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.19□□□□□ -2.38
PER3P56645 SNORD114-9-201ENST00000364370 72 ntBASIC0.18□□□□□ -2.38
PER3P56645 RNU6-380P-201ENST00000410207 107 ntBASIC0.18□□□□□ -2.38
PER3P56645 MIR4636-201ENST00000582271 80 ntBASIC0.18□□□□□ -2.38
PER3P56645 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.17□□□□□ -2.38
PER3P56645 SNORA49-201ENST00000386157 136 ntBASIC0.17□□□□□ -2.38
PER3P56645 RNU6-279P-201ENST00000391297 101 ntBASIC0.17□□□□□ -2.38
PER3P56645 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.17□□□□□ -2.38
PER3P56645 RNA5SP225-201ENST00000410874 135 ntBASIC0.17□□□□□ -2.38
PER3P56645 MIR593-201ENST00000384856 100 ntBASIC0.16□□□□□ -2.38
PER3P56645 RNU6-807P-201ENST00000516805 107 ntBASIC0.16□□□□□ -2.38
PER3P56645 MIR4768-201ENST00000585270 74 ntBASIC0.16□□□□□ -2.38
PER3P56645 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
PER3P56645 MIR6759-201ENST00000638110 65 ntBASIC0.16□□□□□ -2.38
PER3P56645 MIR610-201ENST00000385139 96 ntBASIC0.15□□□□□ -2.39
PER3P56645 snoU13.13-201ENST00000458842 104 ntBASIC0.15□□□□□ -2.39
PER3P56645 RNU6-857P-201ENST00000515893 110 ntBASIC0.15□□□□□ -2.39
PER3P56645 RNU6-180P-201ENST00000516697 61 ntBASIC0.15□□□□□ -2.39
PER3P56645 MIR5190-201ENST00000581537 80 ntBASIC0.15□□□□□ -2.39
PER3P56645 MIR3675-201ENST00000583661 73 ntBASIC0.15□□□□□ -2.39
PER3P56645 Y_RNA.788-201ENST00000622394 112 ntBASIC0.15□□□□□ -2.39
PER3P56645 SNORA2.1-201ENST00000363089 137 ntBASIC0.14□□□□□ -2.39
PER3P56645 SNORA8.1-201ENST00000384250 140 ntBASIC0.14□□□□□ -2.39
PER3P56645 MIR106A-201ENST00000384870 81 ntBASIC0.14□□□□□ -2.39
PER3P56645 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
PER3P56645 RNA5SP163-201ENST00000410304 99 ntBASIC0.14□□□□□ -2.39
PER3P56645 Y_RNA.633-201ENST00000459107 95 ntBASIC0.14□□□□□ -2.39
PER3P56645 RNA5SP147-201ENST00000516493 109 ntBASIC0.14□□□□□ -2.39
PER3P56645 MIR5589-201ENST00000579442 60 ntBASIC0.14□□□□□ -2.39
PER3P56645 MIR4802-201ENST00000581881 80 ntBASIC0.14□□□□□ -2.39
PER3P56645 SNORA63.6-201ENST00000364921 119 ntBASIC0.13□□□□□ -2.39
PER3P56645 MIR145-201ENST00000384967 88 ntBASIC0.13□□□□□ -2.39
PER3P56645 MIR4743-201ENST00000584576 69 ntBASIC0.13□□□□□ -2.39
PER3P56645 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
PER3P56645 RNU6-1036P-201ENST00000383959 104 ntBASIC0.12□□□□□ -2.39
PER3P56645 RNU6-1275P-201ENST00000391087 107 ntBASIC0.12□□□□□ -2.39
PER3P56645 MIR892B-201ENST00000401279 77 ntBASIC0.12□□□□□ -2.39
PER3P56645 Y_RNA.685-201ENST00000516532 108 ntBASIC0.12□□□□□ -2.39
PER3P56645 AC145423.2-201ENST00000610631 239 ntBASIC0.12□□□□□ -2.39
PER3P56645 MIR6514-201ENST00000622549 70 ntBASIC0.12□□□□□ -2.39
PER3P56645 MIR664A-201ENST00000626086 82 ntBASIC0.12□□□□□ -2.39
PER3P56645 SNORD114-5-201ENST00000362928 70 ntBASIC0.11□□□□□ -2.39
PER3P56645 Y_RNA.185-201ENST00000363894 100 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms