Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MIRLET7B-201ENST00000385140 83 ntBASIC-0.58□□□□□ -2.5
PEX3P56589 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.58□□□□□ -2.5
PEX3P56589 SNORD115-23-201ENST00000364461 82 ntBASIC-0.59□□□□□ -2.5
PEX3P56589 RNU6-592P-201ENST00000411333 103 ntBASIC-0.59□□□□□ -2.5
PEX3P56589 RNU7-153P-201ENST00000516455 62 ntBASIC-0.59□□□□□ -2.5
PEX3P56589 AP001318.4-201ENST00000616637 121 ntBASIC-0.59□□□□□ -2.5
PEX3P56589 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.59□□□□□ -2.5
PEX3P56589 MIR2052-201ENST00000636055 55 ntBASIC-0.59□□□□□ -2.5
PEX3P56589 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.6□□□□□ -2.51
PEX3P56589 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.6□□□□□ -2.51
PEX3P56589 RNU6-901P-201ENST00000384593 106 ntBASIC-0.6□□□□□ -2.51
PEX3P56589 AL606753.1-201ENST00000427435 87 ntBASIC-0.6□□□□□ -2.51
PEX3P56589 RPS29P8-201ENST00000445109 171 ntBASIC-0.6□□□□□ -2.51
PEX3P56589 AC021146.9-201ENST00000512503 156 ntBASIC-0.6□□□□□ -2.51
PEX3P56589 SNORD75.1-201ENST00000408373 60 ntBASIC-0.61□□□□□ -2.51
PEX3P56589 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.61□□□□□ -2.51
PEX3P56589 SNORD38.3-201ENST00000516599 73 ntBASIC-0.61□□□□□ -2.51
PEX3P56589 MIR4636-201ENST00000582271 80 ntBASIC-0.61□□□□□ -2.51
PEX3P56589 AL391099.1-201ENST00000624635 187 ntBASIC-0.61□□□□□ -2.51
PEX3P56589 RNU6-215P-201ENST00000365169 102 ntBASIC-0.62□□□□□ -2.51
PEX3P56589 RNU6-497P-201ENST00000365316 104 ntBASIC-0.62□□□□□ -2.51
PEX3P56589 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
PEX3P56589 MIR5704-201ENST00000584029 77 ntBASIC-0.62□□□□□ -2.51
PEX3P56589 MIR4773-1-201ENST00000637203 78 ntBASIC-0.62□□□□□ -2.51
PEX3P56589 SNORD114-14-201ENST00000362723 75 ntBASIC-0.63□□□□□ -2.51
PEX3P56589 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.63□□□□□ -2.51
PEX3P56589 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.63□□□□□ -2.51
PEX3P56589 RNU6-260P-201ENST00000384092 107 ntBASIC-0.63□□□□□ -2.51
PEX3P56589 RNU6-789P-201ENST00000517105 102 ntBASIC-0.63□□□□□ -2.51
PEX3P56589 MIR4493-201ENST00000584016 73 ntBASIC-0.63□□□□□ -2.51
PEX3P56589 MIR4436A-201ENST00000585278 85 ntBASIC-0.63□□□□□ -2.51
PEX3P56589 MIR101-1-201ENST00000362265 75 ntBASIC-0.64□□□□□ -2.51
PEX3P56589 RNU6-633P-201ENST00000362612 103 ntBASIC-0.64□□□□□ -2.51
PEX3P56589 SNORA2.1-201ENST00000363089 137 ntBASIC-0.64□□□□□ -2.51
PEX3P56589 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.64□□□□□ -2.51
PEX3P56589 MIR519C-201ENST00000385053 87 ntBASIC-0.64□□□□□ -2.51
PEX3P56589 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.64□□□□□ -2.51
PEX3P56589 MIR3657-201ENST00000584818 117 ntBASIC-0.64□□□□□ -2.51
PEX3P56589 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.65□□□□□ -2.51
PEX3P56589 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.65□□□□□ -2.51
PEX3P56589 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.65□□□□□ -2.51
PEX3P56589 SNORA3B-201ENST00000391305 131 ntBASIC-0.65□□□□□ -2.51
PEX3P56589 MIR4668-201ENST00000582284 70 ntBASIC-0.65□□□□□ -2.51
PEX3P56589 MALAT1.1-201ENST00000618249 95 ntBASIC-0.65□□□□□ -2.51
PEX3P56589 AC090617.8-201ENST00000623339 167 ntBASIC-0.65□□□□□ -2.51
PEX3P56589 RNU6-640P-201ENST00000363693 105 ntBASIC-0.66□□□□□ -2.52
PEX3P56589 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.66□□□□□ -2.52
PEX3P56589 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.66□□□□□ -2.52
PEX3P56589 MIR6509-201ENST00000614603 85 ntBASIC-0.66□□□□□ -2.52
PEX3P56589 MIR8068-201ENST00000618032 68 ntBASIC-0.66□□□□□ -2.52
PEX3P56589 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.67□□□□□ -2.52
PEX3P56589 RNU6-219P-201ENST00000364728 107 ntBASIC-0.67□□□□□ -2.52
PEX3P56589 RNU6-274P-201ENST00000459566 107 ntBASIC-0.67□□□□□ -2.52
PEX3P56589 SNORA40.13-201ENST00000516379 120 ntBASIC-0.67□□□□□ -2.52
PEX3P56589 YWHAEP3-201ENST00000582767 121 ntBASIC-0.67□□□□□ -2.52
PEX3P56589 SNORA13-201ENST00000458790 133 ntBASIC-0.68□□□□□ -2.52
PEX3P56589 RNU6-752P-201ENST00000516376 102 ntBASIC-0.68□□□□□ -2.52
PEX3P56589 RNU6-208P-201ENST00000362431 107 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 SNORA63.4-201ENST00000362763 126 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 MIR488-201ENST00000365739 83 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 RNU6-147P-201ENST00000383983 107 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 RNU6-905P-201ENST00000384434 107 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 SNORD20-201ENST00000384550 80 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 MIR203A-201ENST00000384836 110 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 MIR204-201ENST00000385200 110 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 RNA5SP451-201ENST00000410588 110 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 RNU4-61P-201ENST00000411243 107 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 RNU6-919P-201ENST00000516731 104 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
PEX3P56589 MIR6854-201ENST00000614935 69 ntBASIC-0.69□□□□□ -2.52
PEX3P56589 RNU6-624P-201ENST00000363411 107 ntBASIC-0.7□□□□□ -2.52
PEX3P56589 RNU6-340P-201ENST00000364005 107 ntBASIC-0.7□□□□□ -2.52
PEX3P56589 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.7□□□□□ -2.52
PEX3P56589 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.7□□□□□ -2.52
PEX3P56589 SNORD77.2-201ENST00000391045 68 ntBASIC-0.7□□□□□ -2.52
PEX3P56589 AL450471.1-201ENST00000447509 127 ntBASIC-0.7□□□□□ -2.52
PEX3P56589 AL691482.2-201ENST00000457453 84 ntBASIC-0.7□□□□□ -2.52
PEX3P56589 U6.96-201ENST00000636425 70 ntBASIC-0.7□□□□□ -2.52
PEX3P56589 SNORA33.1-201ENST00000364957 130 ntBASIC-0.71□□□□□ -2.52
PEX3P56589 RNU6-32P-201ENST00000383948 107 ntBASIC-0.71□□□□□ -2.52
PEX3P56589 RNU6-13P-201ENST00000384248 107 ntBASIC-0.71□□□□□ -2.52
PEX3P56589 RNU6-12P-201ENST00000384604 107 ntBASIC-0.71□□□□□ -2.52
PEX3P56589 RNU6-41P-201ENST00000384741 107 ntBASIC-0.71□□□□□ -2.52
PEX3P56589 RNA5SP147-201ENST00000516493 109 ntBASIC-0.71□□□□□ -2.52
PEX3P56589 RNU6-35P-201ENST00000384530 107 ntBASIC-0.72□□□□□ -2.52
PEX3P56589 MIR604-201ENST00000384880 94 ntBASIC-0.72□□□□□ -2.52
PEX3P56589 SNORD116-22-201ENST00000384430 92 ntBASIC-0.73□□□□□ -2.53
PEX3P56589 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.73□□□□□ -2.53
PEX3P56589 MIR518B-201ENST00000385127 83 ntBASIC-0.73□□□□□ -2.53
PEX3P56589 RNU6-721P-201ENST00000410155 105 ntBASIC-0.73□□□□□ -2.53
PEX3P56589 AC140658.3-201ENST00000567603 271 ntBASIC-0.73□□□□□ -2.53
PEX3P56589 snoR1.1-201ENST00000628177 80 ntBASIC-0.73□□□□□ -2.53
PEX3P56589 RNU6-402P-201ENST00000410678 103 ntBASIC-0.74□□□□□ -2.53
PEX3P56589 MIR3681-201ENST00000580089 72 ntBASIC-0.74□□□□□ -2.53
PEX3P56589 MIR6739-201ENST00000622461 75 ntBASIC-0.74□□□□□ -2.53
PEX3P56589 MIR224-201ENST00000384889 81 ntBASIC-0.75□□□□□ -2.53
PEX3P56589 AL035461.1-201ENST00000421490 332 ntBASIC-0.75□□□□□ -2.53
PEX3P56589 AC093729.1-201ENST00000513074 128 ntBASIC-0.75□□□□□ -2.53
PEX3P56589 AC021146.6-201ENST00000514659 117 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms