Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AL157398.1-201ENST00000452981 186 ntBASIC0.98□□□□□ -2.25
EPHA4P54764 MIR6767-201ENST00000637302 66 ntBASIC0.98□□□□□ -2.25
EPHA4P54764 MIR518A1-201ENST00000385068 85 ntBASIC0.97□□□□□ -2.25
EPHA4P54764 MIR548E-201ENST00000408287 88 ntBASIC0.97□□□□□ -2.25
EPHA4P54764 SNORD114-29-201ENST00000364819 70 ntBASIC0.96□□□□□ -2.26
EPHA4P54764 Y_RNA.423-201ENST00000384057 113 ntBASIC0.96□□□□□ -2.26
EPHA4P54764 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
EPHA4P54764 AC110620.1-201ENST00000416042 228 ntBASIC0.96□□□□□ -2.26
EPHA4P54764 PSMC1P5-201ENST00000512850 177 ntBASIC0.96□□□□□ -2.26
EPHA4P54764 RNU6-848P-201ENST00000515948 107 ntBASIC0.96□□□□□ -2.26
EPHA4P54764 RNU6-617P-201ENST00000516147 107 ntBASIC0.96□□□□□ -2.26
EPHA4P54764 RNU6-473P-201ENST00000516164 107 ntBASIC0.96□□□□□ -2.26
EPHA4P54764 RNU6-1049P-201ENST00000516414 107 ntBASIC0.96□□□□□ -2.26
EPHA4P54764 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
EPHA4P54764 RNU6-669P-201ENST00000365575 107 ntBASIC0.95□□□□□ -2.26
EPHA4P54764 Y_RNA.633-201ENST00000459107 95 ntBASIC0.95□□□□□ -2.26
EPHA4P54764 RNU6-42P-201ENST00000384165 107 ntBASIC0.94□□□□□ -2.26
EPHA4P54764 SCARNA21.1-201ENST00000515996 128 ntBASIC0.94□□□□□ -2.26
EPHA4P54764 MIR548V-201ENST00000584165 80 ntBASIC0.94□□□□□ -2.26
EPHA4P54764 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
EPHA4P54764 SNORA33.1-201ENST00000364957 130 ntBASIC0.93□□□□□ -2.26
EPHA4P54764 MIR582-201ENST00000365731 98 ntBASIC0.93□□□□□ -2.26
EPHA4P54764 MIR520E-201ENST00000384867 87 ntBASIC0.93□□□□□ -2.26
EPHA4P54764 RNA5SP220-201ENST00000516298 104 ntBASIC0.93□□□□□ -2.26
EPHA4P54764 RNU1-29P-201ENST00000606574 126 ntBASIC0.93□□□□□ -2.26
EPHA4P54764 U6.96-201ENST00000636425 70 ntBASIC0.93□□□□□ -2.26
EPHA4P54764 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.92□□□□□ -2.26
EPHA4P54764 SNORA25.5-201ENST00000363782 126 ntBASIC0.91□□□□□ -2.26
EPHA4P54764 MIR517B-201ENST00000385102 67 ntBASIC0.91□□□□□ -2.26
EPHA4P54764 MIR516B1-201ENST00000385211 90 ntBASIC0.91□□□□□ -2.26
EPHA4P54764 RNU6-863P-201ENST00000515989 104 ntBASIC0.91□□□□□ -2.26
EPHA4P54764 RPS29P1-201ENST00000465274 159 ntBASIC0.9□□□□□ -2.27
EPHA4P54764 MIR6788-201ENST00000618842 66 ntBASIC0.9□□□□□ -2.27
EPHA4P54764 MIR373-201ENST00000362273 69 ntBASIC0.89□□□□□ -2.27
EPHA4P54764 RNU6-940P-201ENST00000363433 104 ntBASIC0.89□□□□□ -2.27
EPHA4P54764 SNORD113-2-201ENST00000391082 72 ntBASIC0.89□□□□□ -2.27
EPHA4P54764 MIR151B-201ENST00000584249 96 ntBASIC0.89□□□□□ -2.27
EPHA4P54764 MIR760-201ENST00000390220 80 ntBASIC0.88□□□□□ -2.27
EPHA4P54764 AC098934.3-201ENST00000430450 190 ntBASIC0.88□□□□□ -2.27
EPHA4P54764 AC243829.6-201ENST00000612652 106 ntBASIC0.88□□□□□ -2.27
EPHA4P54764 Y_RNA.540-201ENST00000384638 111 ntBASIC0.87□□□□□ -2.27
EPHA4P54764 RNU4-54P-201ENST00000516428 129 ntBASIC0.87□□□□□ -2.27
EPHA4P54764 AC022709.1-201ENST00000615967 87 ntBASIC0.87□□□□□ -2.27
EPHA4P54764 AC084368.1-201ENST00000620935 65 ntBASIC0.87□□□□□ -2.27
EPHA4P54764 RNU6-499P-201ENST00000365615 107 ntBASIC0.86□□□□□ -2.27
EPHA4P54764 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
EPHA4P54764 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.86□□□□□ -2.27
EPHA4P54764 MIR548J-201ENST00000408833 112 ntBASIC0.86□□□□□ -2.27
EPHA4P54764 RNU6-1223P-201ENST00000517124 104 ntBASIC0.86□□□□□ -2.27
EPHA4P54764 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
EPHA4P54764 RNU6-92P-201ENST00000605893 104 ntBASIC0.86□□□□□ -2.27
EPHA4P54764 U2.7-201ENST00000619197 100 ntBASIC0.86□□□□□ -2.27
EPHA4P54764 MIR6734-201ENST00000621166 68 ntBASIC0.86□□□□□ -2.27
EPHA4P54764 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
EPHA4P54764 RNU6-698P-201ENST00000363523 107 ntBASIC0.85□□□□□ -2.27
EPHA4P54764 RNU6-34P-201ENST00000364874 107 ntBASIC0.85□□□□□ -2.27
EPHA4P54764 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
EPHA4P54764 RNU7-188P-201ENST00000517063 64 ntBASIC0.85□□□□□ -2.27
EPHA4P54764 MIR4677-201ENST00000584153 80 ntBASIC0.85□□□□□ -2.27
EPHA4P54764 RNA5SP192-201ENST00000364404 120 ntBASIC0.83□□□□□ -2.28
EPHA4P54764 MIR630-201ENST00000384957 97 ntBASIC0.83□□□□□ -2.28
EPHA4P54764 RNU7-129P-201ENST00000516128 62 ntBASIC0.83□□□□□ -2.28
EPHA4P54764 RNU7-174P-201ENST00000516248 59 ntBASIC0.83□□□□□ -2.28
EPHA4P54764 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
EPHA4P54764 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
EPHA4P54764 RNA5SP128-201ENST00000365305 116 ntBASIC0.82□□□□□ -2.28
EPHA4P54764 MIR501-201ENST00000390204 84 ntBASIC0.82□□□□□ -2.28
EPHA4P54764 CYP3A137P-201ENST00000562436 69 ntBASIC0.82□□□□□ -2.28
EPHA4P54764 CYP3A54P-201ENST00000566950 75 ntBASIC0.82□□□□□ -2.28
EPHA4P54764 MIR6755-201ENST00000619993 66 ntBASIC0.82□□□□□ -2.28
EPHA4P54764 RNU6-945P-201ENST00000383947 107 ntBASIC0.81□□□□□ -2.28
EPHA4P54764 AL021921.1-201ENST00000442774 93 ntBASIC0.81□□□□□ -2.28
EPHA4P54764 MIR548AD-201ENST00000584780 82 ntBASIC0.81□□□□□ -2.28
EPHA4P54764 MIR4698-201ENST00000577795 80 ntBASIC0.8□□□□□ -2.28
EPHA4P54764 MIR466-201ENST00000580653 84 ntBASIC0.8□□□□□ -2.28
EPHA4P54764 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
EPHA4P54764 RNU6-1232P-201ENST00000516299 86 ntBASIC0.79□□□□□ -2.28
EPHA4P54764 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
EPHA4P54764 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
EPHA4P54764 MTND4LP19-201ENST00000403051 166 ntBASIC0.78□□□□□ -2.28
EPHA4P54764 MIR5000-201ENST00000577717 103 ntBASIC0.78□□□□□ -2.28
EPHA4P54764 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
EPHA4P54764 RNA5SP121-201ENST00000516537 101 ntBASIC0.77□□□□□ -2.29
EPHA4P54764 RNU6-122P-201ENST00000516818 107 ntBASIC0.77□□□□□ -2.29
EPHA4P54764 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
EPHA4P54764 Y_RNA.246-201ENST00000364495 108 ntBASIC0.76□□□□□ -2.29
EPHA4P54764 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
EPHA4P54764 SNORA75.1-201ENST00000391130 148 ntBASIC0.76□□□□□ -2.29
EPHA4P54764 RNU6-518P-201ENST00000516056 96 ntBASIC0.76□□□□□ -2.29
EPHA4P54764 RNA5SP480-201ENST00000516840 109 ntBASIC0.76□□□□□ -2.29
EPHA4P54764 SNORD114-26-201ENST00000363543 72 ntBASIC0.75□□□□□ -2.29
EPHA4P54764 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.75□□□□□ -2.29
EPHA4P54764 PVT1_3.1-201ENST00000620853 95 ntBASIC0.75□□□□□ -2.29
EPHA4P54764 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
EPHA4P54764 SNORA9.1-201ENST00000362412 131 ntBASIC0.74□□□□□ -2.29
EPHA4P54764 MIR598-201ENST00000384868 97 ntBASIC0.74□□□□□ -2.29
EPHA4P54764 AC243829.3-201ENST00000622177 108 ntBASIC0.74□□□□□ -2.29
EPHA4P54764 SNORD44.1-201ENST00000363202 61 ntBASIC0.73□□□□□ -2.29
EPHA4P54764 RNU6-1036P-201ENST00000383959 104 ntBASIC0.73□□□□□ -2.29
EPHA4P54764 MIR633-201ENST00000384821 98 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms