Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SNORA70.25-201ENST00000612741 95 ntBASIC1.87□□□□□ -2.11
NUBP1P53384 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NUBP1P53384 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
NUBP1P53384 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
NUBP1P53384 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
NUBP1P53384 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.86□□□□□ -2.11
NUBP1P53384 AC090617.8-201ENST00000623339 167 ntBASIC1.85□□□□□ -2.11
NUBP1P53384 RNA5SP470-201ENST00000516463 106 ntBASIC1.84□□□□□ -2.11
NUBP1P53384 SNORD114-29-201ENST00000364819 70 ntBASIC1.83□□□□□ -2.12
NUBP1P53384 RNU7-154P-201ENST00000516194 62 ntBASIC1.83□□□□□ -2.12
NUBP1P53384 MIR6734-201ENST00000621166 68 ntBASIC1.83□□□□□ -2.12
NUBP1P53384 HMGN2P22-201ENST00000427588 175 ntBASIC1.82□□□□□ -2.12
NUBP1P53384 RNU6-717P-201ENST00000459076 104 ntBASIC1.82□□□□□ -2.12
NUBP1P53384 U7.6-201ENST00000610841 64 ntBASIC1.82□□□□□ -2.12
NUBP1P53384 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
NUBP1P53384 RNU1-124P-201ENST00000363861 145 ntBASIC1.81□□□□□ -2.12
NUBP1P53384 RNU6-810P-201ENST00000364001 107 ntBASIC1.81□□□□□ -2.12
NUBP1P53384 MIR5002-201ENST00000584713 97 ntBASIC1.81□□□□□ -2.12
NUBP1P53384 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
NUBP1P53384 SNORD26-201ENST00000384147 75 ntBASIC1.8□□□□□ -2.12
NUBP1P53384 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
NUBP1P53384 RNU6-172P-201ENST00000411000 93 ntBASIC1.8□□□□□ -2.12
NUBP1P53384 RNA5SP222-201ENST00000411039 105 ntBASIC1.8□□□□□ -2.12
NUBP1P53384 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
NUBP1P53384 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.8□□□□□ -2.12
NUBP1P53384 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
NUBP1P53384 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.79□□□□□ -2.12
NUBP1P53384 SNORD53B-201ENST00000577887 78 ntBASIC1.79□□□□□ -2.12
NUBP1P53384 MIR4752-201ENST00000579672 72 ntBASIC1.79□□□□□ -2.12
NUBP1P53384 RNA5SP102-201ENST00000516865 106 ntBASIC1.78□□□□□ -2.12
NUBP1P53384 RNA5SP404-201ENST00000517118 132 ntBASIC1.78□□□□□ -2.12
NUBP1P53384 MIR8081-201ENST00000611533 95 ntBASIC1.78□□□□□ -2.12
NUBP1P53384 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
NUBP1P53384 SNORD115-25-201ENST00000362619 82 ntBASIC1.77□□□□□ -2.13
NUBP1P53384 MIR6779-201ENST00000617283 64 ntBASIC1.77□□□□□ -2.13
NUBP1P53384 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.76□□□□□ -2.13
NUBP1P53384 MIR3122-201ENST00000577243 73 ntBASIC1.76□□□□□ -2.13
NUBP1P53384 MIR6773-201ENST00000612812 74 ntBASIC1.75□□□□□ -2.13
NUBP1P53384 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NUBP1P53384 SNORD1B-201ENST00000363091 84 ntBASIC1.74□□□□□ -2.13
NUBP1P53384 AC022709.1-201ENST00000615967 87 ntBASIC1.74□□□□□ -2.13
NUBP1P53384 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.74□□□□□ -2.13
NUBP1P53384 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
NUBP1P53384 RNA5SP325-201ENST00000363756 130 ntBASIC1.73□□□□□ -2.13
NUBP1P53384 RPS29P23-201ENST00000458635 123 ntBASIC1.73□□□□□ -2.13
NUBP1P53384 Y_RNA.109-201ENST00000363215 102 ntBASIC1.72□□□□□ -2.13
NUBP1P53384 RNU6-337P-201ENST00000391243 106 ntBASIC1.72□□□□□ -2.13
NUBP1P53384 MIR548F3-201ENST00000408509 87 ntBASIC1.72□□□□□ -2.13
NUBP1P53384 RNY1P8-201ENST00000383970 114 ntBASIC1.71□□□□□ -2.14
NUBP1P53384 RNU6-838P-201ENST00000363399 108 ntBASIC1.7□□□□□ -2.14
NUBP1P53384 SNORD114-22-201ENST00000365423 72 ntBASIC1.7□□□□□ -2.14
NUBP1P53384 SNORA2A-201ENST00000383885 135 ntBASIC1.7□□□□□ -2.14
NUBP1P53384 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NUBP1P53384 MIR4421-201ENST00000578133 69 ntBASIC1.7□□□□□ -2.14
NUBP1P53384 SNORA67.6-201ENST00000391093 99 ntBASIC1.69□□□□□ -2.14
NUBP1P53384 MIR6515-201ENST00000619843 57 ntBASIC1.69□□□□□ -2.14
NUBP1P53384 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NUBP1P53384 MIR26B-201ENST00000362251 77 ntBASIC1.68□□□□□ -2.14
NUBP1P53384 RNA5SP160-201ENST00000364866 120 ntBASIC1.68□□□□□ -2.14
NUBP1P53384 RNU6-458P-201ENST00000384179 107 ntBASIC1.68□□□□□ -2.14
NUBP1P53384 AC069271.1-201ENST00000445577 156 ntBASIC1.68□□□□□ -2.14
NUBP1P53384 U6.58-201ENST00000613107 107 ntBASIC1.68□□□□□ -2.14
NUBP1P53384 RNU1-42P-201ENST00000364033 160 ntBASIC1.67□□□□□ -2.14
NUBP1P53384 SNORA36.2-201ENST00000384004 127 ntBASIC1.67□□□□□ -2.14
NUBP1P53384 RNU6-229P-201ENST00000516614 102 ntBASIC1.67□□□□□ -2.14
NUBP1P53384 RNU6-419P-201ENST00000517030 63 ntBASIC1.67□□□□□ -2.14
NUBP1P53384 RNU7-188P-201ENST00000517063 64 ntBASIC1.67□□□□□ -2.14
NUBP1P53384 AL353765.1-201ENST00000605514 183 ntBASIC1.67□□□□□ -2.14
NUBP1P53384 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.67□□□□□ -2.14
NUBP1P53384 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
NUBP1P53384 MIR4490-201ENST00000582647 84 ntBASIC1.66□□□□□ -2.14
NUBP1P53384 RNU1-29P-201ENST00000606574 126 ntBASIC1.66□□□□□ -2.14
NUBP1P53384 RNA5SP517-201ENST00000364724 117 ntBASIC1.65□□□□□ -2.15
NUBP1P53384 AL353770.2-201ENST00000620024 78 ntBASIC1.65□□□□□ -2.15
NUBP1P53384 PVT1_3.1-201ENST00000620853 95 ntBASIC1.65□□□□□ -2.15
NUBP1P53384 RNU6-247P-201ENST00000362636 107 ntBASIC1.64□□□□□ -2.15
NUBP1P53384 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
NUBP1P53384 MIR598-201ENST00000384868 97 ntBASIC1.64□□□□□ -2.15
NUBP1P53384 MIRLET7B-201ENST00000385140 83 ntBASIC1.64□□□□□ -2.15
NUBP1P53384 RNU7-160P-201ENST00000516660 62 ntBASIC1.64□□□□□ -2.15
NUBP1P53384 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
NUBP1P53384 MIR548AG1-201ENST00000579932 66 ntBASIC1.63□□□□□ -2.15
NUBP1P53384 MIR6078-201ENST00000611069 100 ntBASIC1.63□□□□□ -2.15
NUBP1P53384 RNU6-1223P-201ENST00000517124 104 ntBASIC1.62□□□□□ -2.15
NUBP1P53384 MIR140-201ENST00000385282 100 ntBASIC1.6□□□□□ -2.15
NUBP1P53384 SNORA49-201ENST00000386157 136 ntBASIC1.6□□□□□ -2.15
NUBP1P53384 AL354695.1-201ENST00000427935 228 ntBASIC1.6□□□□□ -2.15
NUBP1P53384 RNU6-782P-201ENST00000516852 104 ntBASIC1.6□□□□□ -2.15
NUBP1P53384 Y_RNA.374-201ENST00000365606 101 ntBASIC1.59□□□□□ -2.15
NUBP1P53384 SNORA25.18-201ENST00000607153 114 ntBASIC1.59□□□□□ -2.15
NUBP1P53384 AC084368.1-201ENST00000620935 65 ntBASIC1.59□□□□□ -2.15
NUBP1P53384 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.59□□□□□ -2.15
NUBP1P53384 RNU6-502P-201ENST00000362419 108 ntBASIC1.58□□□□□ -2.16
NUBP1P53384 MIR545-201ENST00000385085 106 ntBASIC1.58□□□□□ -2.16
NUBP1P53384 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.58□□□□□ -2.16
NUBP1P53384 SNORD71-201ENST00000411292 86 ntBASIC1.58□□□□□ -2.16
NUBP1P53384 MIR4419B-201ENST00000577260 68 ntBASIC1.58□□□□□ -2.16
NUBP1P53384 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
NUBP1P53384 SNORD118-201ENST00000363593 134 ntBASIC1.57□□□□□ -2.16
NUBP1P53384 RNU1-93P-201ENST00000364704 169 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 577.6 ms