Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MIR369-201ENST00000362155 70 ntBASIC-2.26□□□□□ -2.77
NUP98P52948 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.26□□□□□ -2.77
NUP98P52948 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.27□□□□□ -2.77
NUP98P52948 RNU6-766P-201ENST00000362478 107 ntBASIC-2.28□□□□□ -2.77
NUP98P52948 SNORD115-31-201ENST00000365318 82 ntBASIC-2.28□□□□□ -2.77
NUP98P52948 MIR548D2-201ENST00000384955 97 ntBASIC-2.28□□□□□ -2.77
NUP98P52948 AL021921.1-201ENST00000442774 93 ntBASIC-2.28□□□□□ -2.77
NUP98P52948 AC005520.4-201ENST00000604337 90 ntBASIC-2.28□□□□□ -2.77
NUP98P52948 SNORD42.2-201ENST00000365570 69 ntBASIC-2.28□□□□□ -2.78
NUP98P52948 MIR577-201ENST00000385196 96 ntBASIC-2.28□□□□□ -2.78
NUP98P52948 MIR1302-6-201ENST00000408466 90 ntBASIC-2.28□□□□□ -2.78
NUP98P52948 RNU6-238P-201ENST00000363313 106 ntBASIC-2.29□□□□□ -2.78
NUP98P52948 RNU6-832P-201ENST00000363319 107 ntBASIC-2.29□□□□□ -2.78
NUP98P52948 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.3□□□□□ -2.78
NUP98P52948 RNU6-478P-201ENST00000363904 110 ntBASIC-2.3□□□□□ -2.78
NUP98P52948 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.3□□□□□ -2.78
NUP98P52948 RNY3P1-201ENST00000365085 102 ntBASIC-2.3□□□□□ -2.78
NUP98P52948 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.3□□□□□ -2.78
NUP98P52948 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.3□□□□□ -2.78
NUP98P52948 AC026407.1-201ENST00000518369 204 ntBASIC-2.3□□□□□ -2.78
NUP98P52948 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.3□□□□□ -2.78
NUP98P52948 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.31□□□□□ -2.78
NUP98P52948 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.31□□□□□ -2.78
NUP98P52948 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.31□□□□□ -2.78
NUP98P52948 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.31□□□□□ -2.78
NUP98P52948 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.31□□□□□ -2.78
NUP98P52948 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.31□□□□□ -2.78
NUP98P52948 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.31□□□□□ -2.78
NUP98P52948 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.31□□□□□ -2.78
NUP98P52948 RNU6-987P-201ENST00000384759 104 ntBASIC-2.31□□□□□ -2.78
NUP98P52948 MIR548Z-201ENST00000584743 97 ntBASIC-2.31□□□□□ -2.78
NUP98P52948 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.32□□□□□ -2.78
NUP98P52948 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.32□□□□□ -2.78
NUP98P52948 RNU6-382P-201ENST00000365181 106 ntBASIC-2.32□□□□□ -2.78
NUP98P52948 SNORD4B-201ENST00000459083 72 ntBASIC-2.32□□□□□ -2.78
NUP98P52948 MIR548AG1-201ENST00000579932 66 ntBASIC-2.32□□□□□ -2.78
NUP98P52948 AC013734.1-201ENST00000619329 111 ntBASIC-2.32□□□□□ -2.78
NUP98P52948 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.32□□□□□ -2.78
NUP98P52948 AC097484.2-201ENST00000509147 251 ntBASIC-2.33□□□□□ -2.78
NUP98P52948 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.33□□□□□ -2.78
NUP98P52948 RNU6-861P-201ENST00000516745 106 ntBASIC-2.33□□□□□ -2.78
NUP98P52948 MIR520D-201ENST00000385002 87 ntBASIC-2.34□□□□□ -2.78
NUP98P52948 RNU6-518P-201ENST00000516056 96 ntBASIC-2.34□□□□□ -2.78
NUP98P52948 MIR3064-201ENST00000581130 66 ntBASIC-2.34□□□□□ -2.78
NUP98P52948 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.34□□□□□ -2.78
NUP98P52948 U6.97-201ENST00000636904 101 ntBASIC-2.34□□□□□ -2.78
NUP98P52948 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.35□□□□□ -2.79
NUP98P52948 RNU6-713P-201ENST00000384761 107 ntBASIC-2.35□□□□□ -2.79
NUP98P52948 RNU6-988P-201ENST00000519081 107 ntBASIC-2.35□□□□□ -2.79
NUP98P52948 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.35□□□□□ -2.79
NUP98P52948 RNU6-1283P-201ENST00000365314 105 ntBASIC-2.36□□□□□ -2.79
NUP98P52948 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.36□□□□□ -2.79
NUP98P52948 AC130289.1-201ENST00000577321 73 ntBASIC-2.36□□□□□ -2.79
NUP98P52948 RBMX2P4-201ENST00000441256 376 ntBASIC-2.37□□□□□ -2.79
NUP98P52948 RNU6-151P-201ENST00000364158 107 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 AL160413.1-201ENST00000622780 310 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 SNORD18C-201ENST00000362704 69 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 RNU6-824P-201ENST00000363724 104 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 RNU6-694P-201ENST00000364071 147 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 RNU6-458P-201ENST00000384179 107 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 Y_RNA.511-201ENST00000384514 103 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 SNORD116-4-201ENST00000384733 96 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 MIR1263-201ENST00000408324 86 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 U6.58-201ENST00000613107 107 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 MIR4773-1-201ENST00000637203 78 ntBASIC-2.38□□□□□ -2.79
NUP98P52948 RNU6-239P-201ENST00000390990 99 ntBASIC-2.39□□□□□ -2.79
NUP98P52948 SNORA18.5-201ENST00000516616 101 ntBASIC-2.39□□□□□ -2.79
NUP98P52948 MIR4439-201ENST00000583746 80 ntBASIC-2.39□□□□□ -2.79
NUP98P52948 RNU6-682P-201ENST00000363843 106 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 RNA5SP292-201ENST00000390974 118 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 Y_RNA.512-201ENST00000384518 102 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 MIR548A3-201ENST00000385297 97 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 SNORD127-201ENST00000458892 86 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 RNU6-875P-201ENST00000516488 106 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 AC139792.2-201ENST00000624218 587 ntBASIC-2.4□□□□□ -2.79
NUP98P52948 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.41□□□□□ -2.8
NUP98P52948 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.41□□□□□ -2.8
NUP98P52948 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.41□□□□□ -2.8
NUP98P52948 RNU6-644P-201ENST00000391155 98 ntBASIC-2.41□□□□□ -2.8
NUP98P52948 U6atac.1-201ENST00000616025 117 ntBASIC-2.41□□□□□ -2.8
NUP98P52948 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.41□□□□□ -2.8
NUP98P52948 SNORD37.2-201ENST00000391075 66 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 MIR3170-201ENST00000582699 77 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 MIR548AA1-201ENST00000384971 97 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.42□□□□□ -2.8
NUP98P52948 RNU6-816P-201ENST00000390914 107 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 AL118496.2-201ENST00000448300 230 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 AC104996.3-201ENST00000590718 94 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 U6.104-201ENST00000637979 90 ntBASIC-2.42□□□□□ -2.8
NUP98P52948 AL589823.1-201ENST00000429577 183 ntBASIC-2.43□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 194.5 ms