Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 SNORD116-4-201ENST00000384733 96 ntBASIC-2.66□□□□□ -2.84
SDC4P31431 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.66□□□□□ -2.84
SDC4P31431 AL118496.2-201ENST00000448300 230 ntBASIC-2.66□□□□□ -2.84
SDC4P31431 RNU7-121P-201ENST00000516604 62 ntBASIC-2.66□□□□□ -2.84
SDC4P31431 RNU6-1153P-201ENST00000516760 105 ntBASIC-2.66□□□□□ -2.84
SDC4P31431 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-2.66□□□□□ -2.84
SDC4P31431 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.67□□□□□ -2.84
SDC4P31431 RNU6-239P-201ENST00000390990 99 ntBASIC-2.67□□□□□ -2.84
SDC4P31431 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.67□□□□□ -2.84
SDC4P31431 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.68□□□□□ -2.84
SDC4P31431 SNORD42.2-201ENST00000365570 69 ntBASIC-2.68□□□□□ -2.84
SDC4P31431 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.68□□□□□ -2.84
SDC4P31431 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.68□□□□□ -2.84
SDC4P31431 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.68□□□□□ -2.84
SDC4P31431 RNU6-752P-201ENST00000516376 102 ntBASIC-2.68□□□□□ -2.84
SDC4P31431 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.68□□□□□ -2.84
SDC4P31431 U2.18-201ENST00000622185 84 ntBASIC-2.68□□□□□ -2.84
SDC4P31431 RNA5SP405-201ENST00000363059 114 ntBASIC-2.69□□□□□ -2.84
SDC4P31431 Y_RNA.282-201ENST00000364793 102 ntBASIC-2.69□□□□□ -2.84
SDC4P31431 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.69□□□□□ -2.84
SDC4P31431 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.69□□□□□ -2.84
SDC4P31431 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.69□□□□□ -2.84
SDC4P31431 RNU7-197P-201ENST00000458836 62 ntBASIC-2.69□□□□□ -2.84
SDC4P31431 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.69□□□□□ -2.84
SDC4P31431 AP000770.2-201ENST00000623694 100 ntBASIC-2.69□□□□□ -2.84
SDC4P31431 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.7□□□□□ -2.84
SDC4P31431 RNU6-194P-201ENST00000363862 105 ntBASIC-2.7□□□□□ -2.84
SDC4P31431 SNORD45B-201ENST00000364617 72 ntBASIC-2.7□□□□□ -2.84
SDC4P31431 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.7□□□□□ -2.84
SDC4P31431 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.7□□□□□ -2.84
SDC4P31431 MIR548A3-201ENST00000385297 97 ntBASIC-2.7□□□□□ -2.84
SDC4P31431 MTND2P23-201ENST00000422990 651 ntBASIC-2.7□□□□□ -2.84
SDC4P31431 RNU6-861P-201ENST00000516745 106 ntBASIC-2.7□□□□□ -2.84
SDC4P31431 MIR4796-201ENST00000580742 81 ntBASIC-2.7□□□□□ -2.84
SDC4P31431 RNU6-645P-201ENST00000364649 106 ntBASIC-2.71□□□□□ -2.84
SDC4P31431 RNU6-880P-201ENST00000384526 107 ntBASIC-2.71□□□□□ -2.84
SDC4P31431 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.71□□□□□ -2.84
SDC4P31431 MIR4777-201ENST00000583710 86 ntBASIC-2.71□□□□□ -2.84
SDC4P31431 AL035470.1-201ENST00000622571 220 ntBASIC-2.71□□□□□ -2.84
SDC4P31431 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.72□□□□□ -2.84
SDC4P31431 AL035461.1-201ENST00000421490 332 ntBASIC-2.72□□□□□ -2.84
SDC4P31431 RNU7-174P-201ENST00000516248 59 ntBASIC-2.72□□□□□ -2.84
SDC4P31431 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.72□□□□□ -2.84
SDC4P31431 MIR3170-201ENST00000582699 77 ntBASIC-2.72□□□□□ -2.84
SDC4P31431 RNU6-766P-201ENST00000362478 107 ntBASIC-2.73□□□□□ -2.85
SDC4P31431 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.73□□□□□ -2.85
SDC4P31431 SNORD115-31-201ENST00000365318 82 ntBASIC-2.73□□□□□ -2.85
SDC4P31431 RNU6-474P-201ENST00000384243 107 ntBASIC-2.73□□□□□ -2.85
SDC4P31431 RNU6-118P-201ENST00000516552 102 ntBASIC-2.73□□□□□ -2.85
SDC4P31431 MIR4680-201ENST00000580906 66 ntBASIC-2.73□□□□□ -2.85
SDC4P31431 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.73□□□□□ -2.85
SDC4P31431 RNY4P27-201ENST00000363341 96 ntBASIC-2.74□□□□□ -2.85
SDC4P31431 RNU6-340P-201ENST00000364005 107 ntBASIC-2.74□□□□□ -2.85
SDC4P31431 RNU6-988P-201ENST00000519081 107 ntBASIC-2.74□□□□□ -2.85
SDC4P31431 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.74□□□□□ -2.85
SDC4P31431 AC013734.1-201ENST00000619329 111 ntBASIC-2.74□□□□□ -2.85
SDC4P31431 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.74□□□□□ -2.85
SDC4P31431 Y_RNA.29-201ENST00000362570 113 ntBASIC-2.75□□□□□ -2.85
SDC4P31431 RNU6-682P-201ENST00000363843 106 ntBASIC-2.75□□□□□ -2.85
SDC4P31431 RNU4-11P-201ENST00000365287 132 ntBASIC-2.75□□□□□ -2.85
SDC4P31431 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.75□□□□□ -2.85
SDC4P31431 RNU6-795P-201ENST00000516323 103 ntBASIC-2.75□□□□□ -2.85
SDC4P31431 MIR3139-201ENST00000579145 76 ntBASIC-2.75□□□□□ -2.85
SDC4P31431 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.76□□□□□ -2.85
SDC4P31431 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.76□□□□□ -2.85
SDC4P31431 RNU6-713P-201ENST00000384761 107 ntBASIC-2.76□□□□□ -2.85
SDC4P31431 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.76□□□□□ -2.85
SDC4P31431 RNU6-587P-201ENST00000391282 106 ntBASIC-2.76□□□□□ -2.85
SDC4P31431 AL158147.1-201ENST00000443970 75 ntBASIC-2.76□□□□□ -2.85
SDC4P31431 AL450471.1-201ENST00000447509 127 ntBASIC-2.76□□□□□ -2.85
SDC4P31431 MIR3144-201ENST00000579460 79 ntBASIC-2.76□□□□□ -2.85
SDC4P31431 MIR4723-201ENST00000585070 81 ntBASIC-2.76□□□□□ -2.85
SDC4P31431 AC025166.1-201ENST00000612411 163 ntBASIC-2.76□□□□□ -2.85
SDC4P31431 MIR548W-201ENST00000581970 74 ntBASIC-2.77□□□□□ -2.85
SDC4P31431 RNU6-639P-201ENST00000384074 107 ntBASIC-2.78□□□□□ -2.85
SDC4P31431 snoU13.10-201ENST00000459301 103 ntBASIC-2.78□□□□□ -2.85
SDC4P31431 AC022559.1-201ENST00000520905 205 ntBASIC-2.78□□□□□ -2.85
SDC4P31431 AC012531.4-201ENST00000616509 177 ntBASIC-2.78□□□□□ -2.85
SDC4P31431 Y_RNA.11-201ENST00000362375 109 ntBASIC-2.79□□□□□ -2.86
SDC4P31431 MIR1207-201ENST00000408249 87 ntBASIC-2.79□□□□□ -2.86
SDC4P31431 RBMX2P4-201ENST00000441256 376 ntBASIC-2.79□□□□□ -2.86
SDC4P31431 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.79□□□□□ -2.86
SDC4P31431 U6.97-201ENST00000636904 101 ntBASIC-2.79□□□□□ -2.86
SDC4P31431 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.8□□□□□ -2.86
SDC4P31431 RNU7-153P-201ENST00000516455 62 ntBASIC-2.8□□□□□ -2.86
SDC4P31431 MIR8062-201ENST00000621515 85 ntBASIC-2.8□□□□□ -2.86
SDC4P31431 MIR429-201ENST00000362106 83 ntBASIC-2.81□□□□□ -2.86
SDC4P31431 SNORD58A-201ENST00000383875 65 ntBASIC-2.81□□□□□ -2.86
SDC4P31431 MIR4795-201ENST00000584182 89 ntBASIC-2.81□□□□□ -2.86
SDC4P31431 AC005520.4-201ENST00000604337 90 ntBASIC-2.81□□□□□ -2.86
SDC4P31431 U4.4-201ENST00000620626 117 ntBASIC-2.81□□□□□ -2.86
SDC4P31431 RNU6-623P-201ENST00000363143 105 ntBASIC-2.82□□□□□ -2.86
SDC4P31431 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.82□□□□□ -2.86
SDC4P31431 AC141273.2-201ENST00000618989 130 ntBASIC-2.82□□□□□ -2.86
SDC4P31431 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.83□□□□□ -2.86
SDC4P31431 SNORD58C-201ENST00000365223 64 ntBASIC-2.83□□□□□ -2.86
SDC4P31431 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.83□□□□□ -2.86
SDC4P31431 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.83□□□□□ -2.86
SDC4P31431 RNU6-247P-201ENST00000362636 107 ntBASIC-2.84□□□□□ -2.86
SDC4P31431 RNU6-681P-201ENST00000364012 104 ntBASIC-2.84□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms