Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SNORA70.25-201ENST00000612741 95 ntBASIC0.95□□□□□ -2.26
RFX1P22670 SNORA2.1-201ENST00000363089 137 ntBASIC0.94□□□□□ -2.26
RFX1P22670 MTND4LP1-201ENST00000446263 157 ntBASIC0.94□□□□□ -2.26
RFX1P22670 RNA5SP147-201ENST00000516493 109 ntBASIC0.94□□□□□ -2.26
RFX1P22670 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
RFX1P22670 SNORD114-2-201ENST00000363953 78 ntBASIC0.93□□□□□ -2.26
RFX1P22670 RNU6-863P-201ENST00000515989 104 ntBASIC0.93□□□□□ -2.26
RFX1P22670 RNU4-54P-201ENST00000516428 129 ntBASIC0.93□□□□□ -2.26
RFX1P22670 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
RFX1P22670 SNORD114-23-201ENST00000363536 72 ntBASIC0.92□□□□□ -2.26
RFX1P22670 RNU6-668P-201ENST00000364180 107 ntBASIC0.92□□□□□ -2.26
RFX1P22670 RNU6-645P-201ENST00000364649 106 ntBASIC0.92□□□□□ -2.26
RFX1P22670 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.92□□□□□ -2.26
RFX1P22670 SNORD114-4-201ENST00000363962 75 ntBASIC0.91□□□□□ -2.26
RFX1P22670 MIR9-2-201ENST00000384838 87 ntBASIC0.91□□□□□ -2.26
RFX1P22670 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
RFX1P22670 MIR4511-201ENST00000582784 87 ntBASIC0.91□□□□□ -2.26
RFX1P22670 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
RFX1P22670 MIR6739-201ENST00000622461 75 ntBASIC0.89□□□□□ -2.27
RFX1P22670 AC103706.3-201ENST00000636297 85 ntBASIC0.89□□□□□ -2.27
RFX1P22670 Y_RNA.115-201ENST00000363272 98 ntBASIC0.88□□□□□ -2.27
RFX1P22670 Y_RNA.178-201ENST00000363832 102 ntBASIC0.88□□□□□ -2.27
RFX1P22670 SNORA2A-201ENST00000383885 135 ntBASIC0.88□□□□□ -2.27
RFX1P22670 RNU6-945P-201ENST00000383947 107 ntBASIC0.88□□□□□ -2.27
RFX1P22670 Y_RNA.407-201ENST00000383986 113 ntBASIC0.88□□□□□ -2.27
RFX1P22670 RNU6-656P-201ENST00000516785 107 ntBASIC0.88□□□□□ -2.27
RFX1P22670 MIR548AE1-201ENST00000583292 70 ntBASIC0.88□□□□□ -2.27
RFX1P22670 U7.6-201ENST00000610841 64 ntBASIC0.88□□□□□ -2.27
RFX1P22670 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.88□□□□□ -2.27
RFX1P22670 Y_RNA.423-201ENST00000384057 113 ntBASIC0.87□□□□□ -2.27
RFX1P22670 snoU13.13-201ENST00000458842 104 ntBASIC0.87□□□□□ -2.27
RFX1P22670 MIR4473-201ENST00000583731 91 ntBASIC0.87□□□□□ -2.27
RFX1P22670 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
RFX1P22670 MIR924-201ENST00000638017 53 ntBASIC0.87□□□□□ -2.27
RFX1P22670 MIR6866-201ENST00000638146 69 ntBASIC0.87□□□□□ -2.27
RFX1P22670 RNA5SP457-201ENST00000363657 124 ntBASIC0.86□□□□□ -2.27
RFX1P22670 MIR508-201ENST00000384857 115 ntBASIC0.86□□□□□ -2.27
RFX1P22670 MIR652-201ENST00000385278 98 ntBASIC0.86□□□□□ -2.27
RFX1P22670 RNU6-229P-201ENST00000516614 102 ntBASIC0.86□□□□□ -2.27
RFX1P22670 AC010487.4-201ENST00000637027 61 ntBASIC0.86□□□□□ -2.27
RFX1P22670 Y_RNA.375-201ENST00000365625 101 ntBASIC0.85□□□□□ -2.27
RFX1P22670 HMGN2P22-201ENST00000427588 175 ntBASIC0.85□□□□□ -2.27
RFX1P22670 SCARNA17.3-201ENST00000516381 125 ntBASIC0.85□□□□□ -2.27
RFX1P22670 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
RFX1P22670 Y_RNA.250-201ENST00000364542 110 ntBASIC0.84□□□□□ -2.27
RFX1P22670 MIR6755-201ENST00000619993 66 ntBASIC0.84□□□□□ -2.27
RFX1P22670 uc_338.10-201ENST00000621872 182 ntBASIC0.84□□□□□ -2.27
RFX1P22670 AC110620.1-201ENST00000416042 228 ntBASIC0.83□□□□□ -2.28
RFX1P22670 AC021146.9-201ENST00000512503 156 ntBASIC0.83□□□□□ -2.28
RFX1P22670 RNA5SP121-201ENST00000516537 101 ntBASIC0.83□□□□□ -2.28
RFX1P22670 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RFX1P22670 SNORD44.1-201ENST00000363202 61 ntBASIC0.82□□□□□ -2.28
RFX1P22670 Y_RNA.125-201ENST00000363371 111 ntBASIC0.82□□□□□ -2.28
RFX1P22670 MIR582-201ENST00000365731 98 ntBASIC0.82□□□□□ -2.28
RFX1P22670 RNU6-1162P-201ENST00000384443 104 ntBASIC0.82□□□□□ -2.28
RFX1P22670 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
RFX1P22670 RNU6-542P-201ENST00000516405 103 ntBASIC0.82□□□□□ -2.28
RFX1P22670 MIR521-2-201ENST00000384818 87 ntBASIC0.81□□□□□ -2.28
RFX1P22670 AL157398.1-201ENST00000452981 186 ntBASIC0.81□□□□□ -2.28
RFX1P22670 RNU6-1089P-201ENST00000516473 104 ntBASIC0.81□□□□□ -2.28
RFX1P22670 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.81□□□□□ -2.28
RFX1P22670 RNA5SP347-201ENST00000362445 119 ntBASIC0.8□□□□□ -2.28
RFX1P22670 MIR548E-201ENST00000408287 88 ntBASIC0.8□□□□□ -2.28
RFX1P22670 Y_RNA.633-201ENST00000459107 95 ntBASIC0.8□□□□□ -2.28
RFX1P22670 RNU6-1232P-201ENST00000516299 86 ntBASIC0.8□□□□□ -2.28
RFX1P22670 Y_RNA.68-201ENST00000362881 102 ntBASIC0.79□□□□□ -2.28
RFX1P22670 RNA5SP215-201ENST00000363440 122 ntBASIC0.79□□□□□ -2.28
RFX1P22670 SNORA63.6-201ENST00000364921 119 ntBASIC0.79□□□□□ -2.28
RFX1P22670 RNA5SP299-201ENST00000391203 116 ntBASIC0.79□□□□□ -2.28
RFX1P22670 MIR5087-201ENST00000635826 76 ntBASIC0.79□□□□□ -2.28
RFX1P22670 SNORA33.1-201ENST00000364957 130 ntBASIC0.78□□□□□ -2.28
RFX1P22670 RNU6-669P-201ENST00000365575 107 ntBASIC0.78□□□□□ -2.28
RFX1P22670 SNORA15B-2-201ENST00000384058 135 ntBASIC0.78□□□□□ -2.28
RFX1P22670 SNORA15B-1-201ENST00000384334 135 ntBASIC0.78□□□□□ -2.28
RFX1P22670 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
RFX1P22670 RNA5SP330-201ENST00000517096 96 ntBASIC0.78□□□□□ -2.28
RFX1P22670 MIR8087-201ENST00000612745 78 ntBASIC0.78□□□□□ -2.28
RFX1P22670 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
RFX1P22670 RNA5SP62-201ENST00000363457 110 ntBASIC0.76□□□□□ -2.29
RFX1P22670 MIR548C-201ENST00000384815 97 ntBASIC0.76□□□□□ -2.29
RFX1P22670 MIR760-201ENST00000390220 80 ntBASIC0.76□□□□□ -2.29
RFX1P22670 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
RFX1P22670 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.76□□□□□ -2.29
RFX1P22670 SNORA68.3-201ENST00000515906 83 ntBASIC0.76□□□□□ -2.29
RFX1P22670 SCARNA21.1-201ENST00000515996 128 ntBASIC0.76□□□□□ -2.29
RFX1P22670 MIR548V-201ENST00000584165 80 ntBASIC0.76□□□□□ -2.29
RFX1P22670 AC243829.3-201ENST00000622177 108 ntBASIC0.76□□□□□ -2.29
RFX1P22670 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
RFX1P22670 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
RFX1P22670 SNORA25.5-201ENST00000363782 126 ntBASIC0.74□□□□□ -2.29
RFX1P22670 RNU6-499P-201ENST00000365615 107 ntBASIC0.74□□□□□ -2.29
RFX1P22670 U2.7-201ENST00000619197 100 ntBASIC0.74□□□□□ -2.29
RFX1P22670 RNA5SP192-201ENST00000364404 120 ntBASIC0.73□□□□□ -2.29
RFX1P22670 MIR501-201ENST00000390204 84 ntBASIC0.73□□□□□ -2.29
RFX1P22670 MIR4677-201ENST00000584153 80 ntBASIC0.73□□□□□ -2.29
RFX1P22670 MIRLET7D-201ENST00000362263 87 ntBASIC0.72□□□□□ -2.29
RFX1P22670 RNA5SP257-201ENST00000363023 116 ntBASIC0.72□□□□□ -2.29
RFX1P22670 RNA5SP128-201ENST00000365305 116 ntBASIC0.72□□□□□ -2.29
RFX1P22670 MIR548AD-201ENST00000584780 82 ntBASIC0.72□□□□□ -2.29
RFX1P22670 RNU6-302P-201ENST00000365249 107 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms