Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SNORA24B-201ENST00000384176 131 ntBASIC0.02□□□□□ -2.41
COL5A1P20908 Y_RNA.558-201ENST00000384685 113 ntBASIC0.02□□□□□ -2.41
COL5A1P20908 AL691482.2-201ENST00000457453 84 ntBASIC0.02□□□□□ -2.41
COL5A1P20908 RNU7-165P-201ENST00000458864 60 ntBASIC0.02□□□□□ -2.41
COL5A1P20908 RNU6-274P-201ENST00000459566 107 ntBASIC0.02□□□□□ -2.41
COL5A1P20908 MIR4668-201ENST00000582284 70 ntBASIC0.02□□□□□ -2.41
COL5A1P20908 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
COL5A1P20908 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.02□□□□□ -2.41
COL5A1P20908 MIR1297-201ENST00000637311 77 ntBASIC0.02□□□□□ -2.41
COL5A1P20908 SNORD114-12-201ENST00000365400 75 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 RNU6-54P-201ENST00000365563 107 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 Y_RNA.369-201ENST00000365568 117 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 RNU6-154P-201ENST00000384306 106 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 SNORA25.13-201ENST00000516395 103 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 NAMPTP3-201ENST00000569273 224 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 Y_RNA.43-201ENST00000362670 111 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 SNORD114-5-201ENST00000362928 70 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 RNU6-161P-201ENST00000363051 106 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 Y_RNA.407-201ENST00000383986 113 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 MIR214-201ENST00000385214 110 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 RNA5SP67-201ENST00000516422 131 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 MIR548AX-201ENST00000580117 73 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 MIR4645-201ENST00000583158 77 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 MIR3675-201ENST00000583661 73 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 AC104996.3-201ENST00000590718 94 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 RN7SL660P-201ENST00000614852 299 ntBASIC0.01□□□□□ -2.41
COL5A1P20908 Y_RNA.250-201ENST00000364542 110 ntBASIC0□□□□□ -2.41
COL5A1P20908 RNU6-219P-201ENST00000364728 107 ntBASIC0□□□□□ -2.41
COL5A1P20908 RNU6-497P-201ENST00000365316 104 ntBASIC0□□□□□ -2.41
COL5A1P20908 RNU6-929P-201ENST00000384429 107 ntBASIC0□□□□□ -2.41
COL5A1P20908 MIR203A-201ENST00000384836 110 ntBASIC0□□□□□ -2.41
COL5A1P20908 RNU6-127P-201ENST00000390897 107 ntBASIC0□□□□□ -2.41
COL5A1P20908 MIR876-201ENST00000401147 81 ntBASIC0□□□□□ -2.41
COL5A1P20908 RNU7-171P-201ENST00000459581 62 ntBASIC0□□□□□ -2.41
COL5A1P20908 Y_RNA.694-201ENST00000516677 117 ntBASIC0□□□□□ -2.41
COL5A1P20908 snoMBII-202.2-201ENST00000517263 86 ntBASIC0□□□□□ -2.41
COL5A1P20908 MIR1295B-201ENST00000636144 60 ntBASIC0□□□□□ -2.41
COL5A1P20908 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 RNU6-208P-201ENST00000362431 107 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 SNORA32.3-201ENST00000384772 121 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 MIR548E-201ENST00000408287 88 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 SNORD42B-201ENST00000458893 67 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 RNU7-153P-201ENST00000516455 62 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 MIR3657-201ENST00000584818 117 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 RNU6-824P-201ENST00000363724 104 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 SNORD77.2-201ENST00000391045 68 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 RNU6-592P-201ENST00000411333 103 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 AC097510.1-201ENST00000510945 133 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 MIR548AE1-201ENST00000583292 70 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
COL5A1P20908 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.02□□□□□ -2.41
COL5A1P20908 RNU6-260P-201ENST00000384092 107 ntBASIC-0.02□□□□□ -2.41
COL5A1P20908 RNU6-820P-201ENST00000384273 107 ntBASIC-0.02□□□□□ -2.41
COL5A1P20908 MIRLET7B-201ENST00000385140 83 ntBASIC-0.02□□□□□ -2.41
COL5A1P20908 MIR652-201ENST00000385278 98 ntBASIC-0.02□□□□□ -2.41
COL5A1P20908 AC244090.1-201ENST00000441884 93 ntBASIC-0.02□□□□□ -2.41
COL5A1P20908 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.03□□□□□ -2.41
COL5A1P20908 RNU6-302P-201ENST00000365249 107 ntBASIC-0.03□□□□□ -2.41
COL5A1P20908 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
COL5A1P20908 AC096531.1-201ENST00000419107 107 ntBASIC-0.03□□□□□ -2.41
COL5A1P20908 snoU13.13-201ENST00000458842 104 ntBASIC-0.03□□□□□ -2.41
COL5A1P20908 SNORA18.1-201ENST00000363418 128 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 SNORD115-22-201ENST00000364456 82 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 AL450471.1-201ENST00000447509 127 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 SCARNA18B-201ENST00000458806 135 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 MIR6514-201ENST00000622549 70 ntBASIC-0.03□□□□□ -2.42
COL5A1P20908 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.04□□□□□ -2.42
COL5A1P20908 RNU6-1255P-201ENST00000363434 112 ntBASIC-0.04□□□□□ -2.42
COL5A1P20908 RNU6-340P-201ENST00000364005 107 ntBASIC-0.04□□□□□ -2.42
COL5A1P20908 RNA5SP173-201ENST00000364857 136 ntBASIC-0.04□□□□□ -2.42
COL5A1P20908 RNU6-382P-201ENST00000365181 106 ntBASIC-0.04□□□□□ -2.42
COL5A1P20908 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.04□□□□□ -2.42
COL5A1P20908 AC022137.1-201ENST00000483735 151 ntBASIC-0.04□□□□□ -2.42
COL5A1P20908 FGF7P7-201ENST00000514120 227 ntBASIC-0.04□□□□□ -2.42
COL5A1P20908 SNORA49-201ENST00000386157 136 ntBASIC-0.05□□□□□ -2.42
COL5A1P20908 MT-TQ-201ENST00000387372 72 ntBASIC-0.05□□□□□ -2.42
COL5A1P20908 AC093729.1-201ENST00000513074 128 ntBASIC-0.05□□□□□ -2.42
COL5A1P20908 RNA5SP170-201ENST00000517150 101 ntBASIC-0.05□□□□□ -2.42
COL5A1P20908 MIR548BB-201ENST00000626714 66 ntBASIC-0.05□□□□□ -2.42
COL5A1P20908 SNORD49B-201ENST00000365172 72 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 MIR1255A-201ENST00000408338 113 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 AP000676.1-201ENST00000533307 52 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 AC006254.2-201ENST00000603259 279 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 RNU6-502P-201ENST00000362419 108 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 RNU6-337P-201ENST00000391243 106 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 AC244250.2-201ENST00000418731 148 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 RNU6-303P-201ENST00000517091 106 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 RNU6-762P-201ENST00000517107 102 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 IGLL4P-201ENST00000614590 133 ntBASIC-0.06□□□□□ -2.42
COL5A1P20908 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.06□□□□□ -2.42
COL5A1P20908 MIR1302-4-201ENST00000408701 150 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms